EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000025558 (Gene tree)
Gene ID: -
Gene Symbol: sar1ab
Alias: fd13d02|sar1a|wu:fd13d02|zgc:110650
Full Name: GTP-binding protein SAR1b-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 4509 bases
Position: chrPEQF01099311.1:1514119-1518627
Accession: 111670075
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000033406	MMR_HSR1	PF01926.23	3.7e-05	1	1
ENSSLDP00000033409	MMR_HSR1	PF01926.23	6.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000034336	-	423	-	ENSSLDP00000033409	140 (aa)	-	-
ENSSLDT00000034333	-	1986	XM_023426636	ENSSLDP00000033406	198 (aa)	XP_023282404	UPI000BBEDA42

Gene Model

Click here to download ENSSLDG00000025558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000025558's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000025558	sar1ab	88	30.102	ENSSLDG00000023797	ARL6	92	30.102
ENSSLDG00000025558	sar1ab	74	34.615	ENSSLDG00000005289	-	78	32.168
ENSSLDG00000025558	sar1ab	64	35.955	ENSSLDG00000021379	ARL5B	50	35.955
ENSSLDG00000025558	sar1ab	64	37.079	ENSSLDG00000000728	arl5c	50	37.079
ENSSLDG00000025558	sar1ab	68	31.250	ENSSLDG00000011226	arl8a	68	34.375
ENSSLDG00000025558	sar1ab	64	33.708	ENSSLDG00000012215	arl5a	50	33.708
ENSSLDG00000025558	sar1ab	69	37.113	ENSSLDG00000008504	-	54	37.113
ENSSLDG00000025558	sar1ab	66	32.258	ENSSLDG00000009763	arl11	54	32.258
ENSSLDG00000025558	sar1ab	80	30.088	ENSSLDG00000001636	-	52	33.103
ENSSLDG00000025558	sar1ab	91	30.000	ENSSLDG00000000124	arl2	76	34.286
ENSSLDG00000025558	sar1ab	64	35.955	ENSSLDG00000012946	arl1	50	35.955
ENSSLDG00000025558	sar1ab	68	30.909	ENSSLDG00000020044	arfrp1	54	30.909
ENSSLDG00000025558	sar1ab	86	32.203	ENSSLDG00000008208	-	82	32.203
ENSSLDG00000025558	sar1ab	66	36.842	ENSSLDG00000006512	-	61	37.795
ENSSLDG00000025558	sar1ab	94	30.526	ENSSLDG00000000746	ARL6	96	30.526
ENSSLDG00000025558	sar1ab	81	38.333	ENSSLDG00000012103	-	67	35.507
ENSSLDG00000025558	sar1ab	100	84.848	ENSSLDG00000017052	sar1b	100	84.848
ENSSLDG00000025558	sar1ab	74	33.654	ENSSLDG00000013951	-	79	31.469
ENSSLDG00000025558	sar1ab	82	33.913	ENSSLDG00000020097	-	60	33.913
ENSSLDG00000025558	sar1ab	74	35.238	ENSSLDG00000021639	arf2b	57	35.238
ENSSLDG00000025558	sar1ab	94	31.183	ENSSLDG00000003967	arl3l2	90	31.183
ENSSLDG00000025558	sar1ab	86	31.818	ENSSLDG00000005628	arl4d	82	31.818
ENSSLDG00000025558	sar1ab	66	34.409	ENSSLDG00000017188	arf5	52	34.409
ENSSLDG00000025558	sar1ab	100	83.838	ENSSLDG00000024197	-	100	83.838
ENSSLDG00000025558	sar1ab	88	30.286	ENSSLDG00000009955	-	90	30.286
ENSSLDG00000025558	sar1ab	66	34.409	ENSSLDG00000005491	-	86	32.990
ENSSLDG00000025558	sar1ab	66	39.796	ENSSLDG00000012798	-	71	35.606
ENSSLDG00000025558	sar1ab	87	30.233	ENSSLDG00000017576	arl3	91	30.233
ENSSLDG00000025558	sar1ab	67	38.384	ENSSLDG00000015190	arl4aa	59	36.522
ENSSLDG00000025558	sar1ab	74	34.615	ENSSLDG00000025143	arf3b	78	32.168
ENSSLDG00000025558	sar1ab	78	37.719	ENSSLDG00000017889	arl4cb	75	33.557
ENSSLDG00000025558	sar1ab	80	30.088	ENSSLDG00000009588	arl8bb	56	30.088

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000025558	sar1ab	100	91.919	ENSACIG00000019827	sar1ab	100	91.919	Amphilophus_citrinellus
ENSSLDG00000025558	sar1ab	100	94.444	ENSAOCG00000022062	sar1ab	100	94.444	Amphiprion_ocellaris
ENSSLDG00000025558	sar1ab	100	94.444	ENSAPEG00000011525	sar1ab	100	94.444	Amphiprion_percula
ENSSLDG00000025558	sar1ab	100	96.970	ENSATEG00000003466	sar1ab	100	96.970	Anabas_testudineus
ENSSLDG00000025558	sar1ab	100	89.394	ENSACLG00000013053	sar1ab	100	89.394	Astatotilapia_calliptera
ENSSLDG00000025558	sar1ab	100	94.949	ENSCSEG00000004825	sar1ab	100	94.949	Cynoglossus_semilaevis
ENSSLDG00000025558	sar1ab	100	91.919	ENSCVAG00000015162	sar1ab	100	91.919	Cyprinodon_variegatus
ENSSLDG00000025558	sar1ab	100	80.303	ENSCVAG00000006500	-	100	80.303	Cyprinodon_variegatus
ENSSLDG00000025558	sar1ab	100	91.919	ENSDARG00000033320	sar1ab	100	91.919	Danio_rerio
ENSSLDG00000025558	sar1ab	100	84.848	ENSELUG00000013652	sar1a	100	84.848	Esox_lucius
ENSSLDG00000025558	sar1ab	100	94.949	ENSELUG00000024279	sar1ab	100	94.949	Esox_lucius
ENSSLDG00000025558	sar1ab	100	90.909	ENSFHEG00000021773	sar1ab	100	90.909	Fundulus_heteroclitus
ENSSLDG00000025558	sar1ab	100	81.818	ENSFHEG00000012352	-	100	81.818	Fundulus_heteroclitus
ENSSLDG00000025558	sar1ab	100	93.434	ENSGMOG00000012588	sar1ab	100	93.434	Gadus_morhua
ENSSLDG00000025558	sar1ab	100	92.424	ENSGAFG00000009702	sar1ab	100	92.424	Gambusia_affinis
ENSSLDG00000025558	sar1ab	100	81.818	ENSGAFG00000004846	-	97	85.217	Gambusia_affinis
ENSSLDG00000025558	sar1ab	100	95.455	ENSGACG00000008616	sar1ab	100	95.455	Gasterosteus_aculeatus
ENSSLDG00000025558	sar1ab	100	89.394	ENSHBUG00000021221	sar1ab	100	89.394	Haplochromis_burtoni
ENSSLDG00000025558	sar1ab	100	93.939	ENSHCOG00000002845	sar1ab	80	93.939	Hippocampus_comes
ENSSLDG00000025558	sar1ab	100	91.414	ENSKMAG00000018006	sar1ab	100	91.414	Kryptolebias_marmoratus
ENSSLDG00000025558	sar1ab	100	96.465	ENSLBEG00000001114	sar1ab	100	96.465	Labrus_bergylta
ENSSLDG00000025558	sar1ab	100	96.970	ENSMAMG00000021314	sar1ab	100	96.970	Mastacembelus_armatus
ENSSLDG00000025558	sar1ab	100	89.394	ENSMZEG00005027606	sar1ab	100	89.394	Maylandia_zebra
ENSSLDG00000025558	sar1ab	100	96.465	ENSMMOG00000010360	sar1ab	100	96.465	Mola_mola
ENSSLDG00000025558	sar1ab	100	95.960	ENSMALG00000005831	sar1ab	100	95.960	Monopterus_albus
ENSSLDG00000025558	sar1ab	100	89.899	ENSNBRG00000018772	sar1ab	100	89.899	Neolamprologus_brichardi
ENSSLDG00000025558	sar1ab	100	90.909	ENSONIG00000018509	sar1ab	100	90.909	Oreochromis_niloticus
ENSSLDG00000025558	sar1ab	100	82.828	ENSORLG00000009132	-	90	82.828	Oryzias_latipes
ENSSLDG00000025558	sar1ab	100	90.404	ENSORLG00000006779	sar1ab	67	90.404	Oryzias_latipes
ENSSLDG00000025558	sar1ab	100	89.899	ENSORLG00020005458	sar1ab	100	89.899	Oryzias_latipes_hni
ENSSLDG00000025558	sar1ab	100	82.828	ENSORLG00020007024	-	90	82.828	Oryzias_latipes_hni
ENSSLDG00000025558	sar1ab	100	82.323	ENSORLG00015006223	-	94	87.500	Oryzias_latipes_hsok
ENSSLDG00000025558	sar1ab	100	90.404	ENSORLG00015010542	sar1ab	100	90.404	Oryzias_latipes_hsok
ENSSLDG00000025558	sar1ab	100	82.323	ENSOMEG00000012020	-	100	82.323	Oryzias_melastigma
ENSSLDG00000025558	sar1ab	100	91.919	ENSOMEG00000004948	sar1ab	100	91.919	Oryzias_melastigma
ENSSLDG00000025558	sar1ab	100	87.374	ENSPKIG00000007615	sar1ab	100	87.374	Paramormyrops_kingsleyae
ENSSLDG00000025558	sar1ab	100	97.475	ENSPMGG00000013330	sar1ab	100	97.475	Periophthalmus_magnuspinnatus
ENSSLDG00000025558	sar1ab	100	92.929	ENSPFOG00000023432	sar1ab	100	92.929	Poecilia_formosa
ENSSLDG00000025558	sar1ab	100	92.929	ENSPLAG00000023705	sar1ab	100	92.929	Poecilia_latipinna
ENSSLDG00000025558	sar1ab	100	81.313	ENSPMEG00000001717	-	100	81.313	Poecilia_mexicana
ENSSLDG00000025558	sar1ab	100	92.929	ENSPMEG00000000559	sar1ab	100	92.929	Poecilia_mexicana
ENSSLDG00000025558	sar1ab	100	92.929	ENSPREG00000016098	sar1ab	100	92.929	Poecilia_reticulata
ENSSLDG00000025558	sar1ab	100	89.899	ENSPNYG00000011603	sar1ab	100	89.899	Pundamilia_nyererei
ENSSLDG00000025558	sar1ab	100	92.424	ENSPNAG00000008007	sar1ab	100	92.424	Pygocentrus_nattereri
ENSSLDG00000025558	sar1ab	100	89.394	ENSSFOG00015014010	sar1a	100	89.394	Scleropages_formosus
ENSSLDG00000025558	sar1ab	79	97.297	ENSSMAG00000020758	sar1ab	80	97.297	Scophthalmus_maximus
ENSSLDG00000025558	sar1ab	100	100.000	ENSSDUG00000010773	sar1ab	100	100.000	Seriola_dumerili
ENSSLDG00000025558	sar1ab	100	94.444	ENSSPAG00000009194	sar1ab	100	94.444	Stegastes_partitus
ENSSLDG00000025558	sar1ab	100	94.949	ENSTRUG00000007269	sar1ab	100	94.949	Takifugu_rubripes
ENSSLDG00000025558	sar1ab	100	93.434	ENSTNIG00000008635	sar1ab	100	93.434	Tetraodon_nigroviridis
ENSSLDG00000025558	sar1ab	100	92.929	ENSXMAG00000003130	sar1ab	100	92.929	Xiphophorus_maculatus
ENSSLDG00000025558	sar1ab	100	82.323	ENSXMAG00000026223	SAR1A	100	82.323	Xiphophorus_maculatus