EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000025613 (Gene tree)
Gene ID: -
Gene Symbol: tnrc6c1
Alias: fj17e06|si:dkey-54k13.1|unm_sa1472|wu:fj17e06
Full Name: trinucleotide repeat-containing gene 6C protein-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 20790 bases
Position: chrPEQF01099435.1:618476-639265
Accession: 111645876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000033488	RRM_1	PF00076.22	0.00017	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000034415	-	5415	XM_023395200	ENSSLDP00000033488	1593 (aa)	XP_023250968	-
ENSSLDT00000034416	-	5031	-	ENSSLDP00000033489	1676 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000025613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000025613's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000025613	tnrc6c1	100	57.275	ENSSLDG00000002077	tnrc6c2	100	58.165

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000025613	tnrc6c1	100	50.083	ENSG00000078687	TNRC6C	100	56.034	Homo_sapiens
ENSSLDG00000025613	tnrc6c1	100	91.068	ENSAPOG00000019749	tnrc6c1	94	91.755	Acanthochromis_polyacanthus
ENSSLDG00000025613	tnrc6c1	97	48.635	ENSAMEG00000013756	TNRC6C	52	60.103	Ailuropoda_melanoleuca
ENSSLDG00000025613	tnrc6c1	100	75.135	ENSACIG00000008075	tnrc6c1	93	75.812	Amphilophus_citrinellus
ENSSLDG00000025613	tnrc6c1	100	90.574	ENSAOCG00000023968	tnrc6c1	94	91.323	Amphiprion_ocellaris
ENSSLDG00000025613	tnrc6c1	100	90.574	ENSAPEG00000009020	tnrc6c1	94	91.323	Amphiprion_percula
ENSSLDG00000025613	tnrc6c1	53	63.282	ENSAPLG00000005456	TNRC6C	85	48.339	Anas_platyrhynchos
ENSSLDG00000025613	tnrc6c1	97	50.448	ENSACAG00000016198	TNRC6C	83	49.913	Anolis_carolinensis
ENSSLDG00000025613	tnrc6c1	100	50.083	ENSANAG00000021554	TNRC6C	100	48.726	Aotus_nancymaae
ENSSLDG00000025613	tnrc6c1	71	78.053	ENSACLG00000000424	tnrc6c1	93	75.758	Astatotilapia_calliptera
ENSSLDG00000025613	tnrc6c1	92	58.596	ENSBTAG00000018658	TNRC6C	100	48.668	Bos_taurus
ENSSLDG00000025613	tnrc6c1	100	49.945	ENSCJAG00000019431	TNRC6C	100	48.668	Callithrix_jacchus
ENSSLDG00000025613	tnrc6c1	93	56.553	ENSCAFG00000005224	TNRC6C	89	58.454	Canis_familiaris
ENSSLDG00000025613	tnrc6c1	97	50.057	ENSCAFG00020006661	TNRC6C	100	48.364	Canis_lupus_dingo
ENSSLDG00000025613	tnrc6c1	92	59.278	ENSCHIG00000026004	TNRC6C	94	49.792	Capra_hircus
ENSSLDG00000025613	tnrc6c1	97	49.775	ENSTSYG00000005403	TNRC6C	94	48.752	Carlito_syrichta
ENSSLDG00000025613	tnrc6c1	100	46.354	ENSCAPG00000007307	TNRC6C	89	45.932	Cavia_aperea
ENSSLDG00000025613	tnrc6c1	100	49.723	ENSCPOG00000000467	TNRC6C	97	49.390	Cavia_porcellus
ENSSLDG00000025613	tnrc6c1	100	50.166	ENSCCAG00000030524	TNRC6C	100	48.726	Cebus_capucinus
ENSSLDG00000025613	tnrc6c1	100	50.139	ENSCATG00000033135	TNRC6C	100	49.057	Cercocebus_atys
ENSSLDG00000025613	tnrc6c1	100	50.333	ENSCLAG00000011139	TNRC6C	89	49.526	Chinchilla_lanigera
ENSSLDG00000025613	tnrc6c1	100	48.859	ENSCSAG00000005167	TNRC6C	89	47.930	Chlorocebus_sabaeus
ENSSLDG00000025613	tnrc6c1	64	63.215	ENSCHOG00000000088	TNRC6C	66	63.256	Choloepus_hoffmanni
ENSSLDG00000025613	tnrc6c1	97	51.353	ENSCPBG00000027960	TNRC6C	94	51.340	Chrysemys_picta_bellii
ENSSLDG00000025613	tnrc6c1	100	50.278	ENSCANG00000041771	TNRC6C	100	49.168	Colobus_angolensis_palliatus
ENSSLDG00000025613	tnrc6c1	97	50.057	ENSCGRG00001022686	Tnrc6c	94	48.615	Cricetulus_griseus_chok1gshd
ENSSLDG00000025613	tnrc6c1	97	50.372	ENSCGRG00000018041	Tnrc6c	94	48.615	Cricetulus_griseus_crigri
ENSSLDG00000025613	tnrc6c1	100	84.591	ENSCSEG00000012744	tnrc6c1	90	84.654	Cynoglossus_semilaevis
ENSSLDG00000025613	tnrc6c1	94	74.116	ENSDARG00000076847	tnrc6c1	99	59.187	Danio_rerio
ENSSLDG00000025613	tnrc6c1	97	50.115	ENSDNOG00000003247	TNRC6C	85	49.703	Dasypus_novemcinctus
ENSSLDG00000025613	tnrc6c1	97	47.980	ENSDORG00000004558	Tnrc6c	94	47.765	Dipodomys_ordii
ENSSLDG00000025613	tnrc6c1	88	54.772	ENSETEG00000005527	TNRC6C	78	54.276	Echinops_telfairi
ENSSLDG00000025613	tnrc6c1	97	50.000	ENSEASG00005004799	TNRC6C	100	49.056	Equus_asinus_asinus
ENSSLDG00000025613	tnrc6c1	97	50.000	ENSECAG00000012486	TNRC6C	90	49.056	Equus_caballus
ENSSLDG00000025613	tnrc6c1	94	55.220	ENSEEUG00000010008	TNRC6C	83	56.026	Erinaceus_europaeus
ENSSLDG00000025613	tnrc6c1	97	50.086	ENSFCAG00000028358	TNRC6C	100	48.670	Felis_catus
ENSSLDG00000025613	tnrc6c1	97	48.904	ENSFALG00000000848	TNRC6C	94	48.352	Ficedula_albicollis
ENSSLDG00000025613	tnrc6c1	100	50.610	ENSFDAG00000010368	TNRC6C	97	49.472	Fukomys_damarensis
ENSSLDG00000025613	tnrc6c1	100	84.375	ENSFHEG00000002936	tnrc6c1	94	82.529	Fundulus_heteroclitus
ENSSLDG00000025613	tnrc6c1	97	51.643	ENSGALG00000001725	TNRC6C	97	50.780	Gallus_gallus
ENSSLDG00000025613	tnrc6c1	100	84.457	ENSGAFG00000019019	tnrc6c1	100	84.519	Gambusia_affinis
ENSSLDG00000025613	tnrc6c1	100	79.421	ENSGACG00000012320	tnrc6c1	88	79.360	Gasterosteus_aculeatus
ENSSLDG00000025613	tnrc6c1	97	52.548	ENSGAGG00000022043	TNRC6C	89	52.346	Gopherus_agassizii
ENSSLDG00000025613	tnrc6c1	100	49.917	ENSGGOG00000011304	TNRC6C	100	48.695	Gorilla_gorilla
ENSSLDG00000025613	tnrc6c1	100	84.726	ENSHBUG00000010846	tnrc6c1	100	84.486	Haplochromis_burtoni
ENSSLDG00000025613	tnrc6c1	100	50.277	ENSHGLG00000004809	TNRC6C	71	53.803	Heterocephalus_glaber_female
ENSSLDG00000025613	tnrc6c1	100	49.752	ENSHGLG00100012597	TNRC6C	71	53.361	Heterocephalus_glaber_male
ENSSLDG00000025613	tnrc6c1	100	63.849	ENSIPUG00000000818	tnrc6c1	89	63.252	Ictalurus_punctatus
ENSSLDG00000025613	tnrc6c1	97	50.855	ENSSTOG00000009101	TNRC6C	97	50.030	Ictidomys_tridecemlineatus
ENSSLDG00000025613	tnrc6c1	97	49.688	ENSJJAG00000017055	Tnrc6c	83	49.204	Jaculus_jaculus
ENSSLDG00000025613	tnrc6c1	100	79.065	ENSKMAG00000021023	tnrc6c1	100	79.065	Kryptolebias_marmoratus
ENSSLDG00000025613	tnrc6c1	100	47.264	ENSLACG00000015283	TNRC6C	97	46.328	Latimeria_chalumnae
ENSSLDG00000025613	tnrc6c1	99	76.788	ENSLOCG00000013377	tnrc6c1	85	76.350	Lepisosteus_oculatus
ENSSLDG00000025613	tnrc6c1	97	48.438	ENSLAFG00000011122	TNRC6C	88	62.756	Loxodonta_africana
ENSSLDG00000025613	tnrc6c1	100	50.139	ENSMFAG00000043943	TNRC6C	100	49.057	Macaca_fascicularis
ENSSLDG00000025613	tnrc6c1	100	50.139	ENSMMUG00000011924	TNRC6C	100	49.057	Macaca_mulatta
ENSSLDG00000025613	tnrc6c1	100	50.083	ENSMNEG00000030405	TNRC6C	100	49.001	Macaca_nemestrina
ENSSLDG00000025613	tnrc6c1	100	50.139	ENSMLEG00000033436	TNRC6C	100	49.057	Mandrillus_leucophaeus
ENSSLDG00000025613	tnrc6c1	100	89.438	ENSMAMG00000023613	tnrc6c1	94	89.750	Mastacembelus_armatus
ENSSLDG00000025613	tnrc6c1	100	84.582	ENSMZEG00005010920	tnrc6c1	94	82.450	Maylandia_zebra
ENSSLDG00000025613	tnrc6c1	90	68.345	ENSMGAG00000003906	TNRC6C	78	66.187	Meleagris_gallopavo
ENSSLDG00000025613	tnrc6c1	97	49.915	ENSMAUG00000021618	Tnrc6c	94	49.530	Mesocricetus_auratus
ENSSLDG00000025613	tnrc6c1	100	49.612	ENSMICG00000003952	TNRC6C	100	49.168	Microcebus_murinus
ENSSLDG00000025613	tnrc6c1	97	50.228	ENSMOCG00000015879	Tnrc6c	91	50.000	Microtus_ochrogaster
ENSSLDG00000025613	tnrc6c1	100	86.175	ENSMMOG00000005203	tnrc6c1	100	86.299	Mola_mola
ENSSLDG00000025613	tnrc6c1	97	50.709	ENSMODG00000001785	TNRC6C	83	50.383	Monodelphis_domestica
ENSSLDG00000025613	tnrc6c1	97	50.228	MGP_CAROLIEiJ_G0017465	Tnrc6c	91	49.734	Mus_caroli
ENSSLDG00000025613	tnrc6c1	97	50.171	ENSMUSG00000025571	Tnrc6c	91	49.675	Mus_musculus
ENSSLDG00000025613	tnrc6c1	97	50.285	MGP_PahariEiJ_G0018593	Tnrc6c	91	49.793	Mus_pahari
ENSSLDG00000025613	tnrc6c1	97	50.000	MGP_SPRETEiJ_G0018309	Tnrc6c	91	49.498	Mus_spretus
ENSSLDG00000025613	tnrc6c1	100	48.313	ENSMPUG00000013348	TNRC6C	83	48.610	Mustela_putorius_furo
ENSSLDG00000025613	tnrc6c1	97	47.661	ENSMLUG00000014431	TNRC6C	82	47.869	Myotis_lucifugus
ENSSLDG00000025613	tnrc6c1	100	49.174	ENSNGAG00000012203	Tnrc6c	83	49.205	Nannospalax_galili
ENSSLDG00000025613	tnrc6c1	100	85.028	ENSNBRG00000005344	tnrc6c1	94	85.162	Neolamprologus_brichardi
ENSSLDG00000025613	tnrc6c1	100	47.040	ENSNLEG00000000047	TNRC6C	89	46.690	Nomascus_leucogenys
ENSSLDG00000025613	tnrc6c1	93	47.090	ENSMEUG00000005104	TNRC6C	73	65.969	Notamacropus_eugenii
ENSSLDG00000025613	tnrc6c1	100	50.416	ENSODEG00000012499	TNRC6C	100	49.667	Octodon_degus
ENSSLDG00000025613	tnrc6c1	100	85.759	ENSONIG00000002210	tnrc6c1	100	85.634	Oreochromis_niloticus
ENSSLDG00000025613	tnrc6c1	100	79.789	ENSORLG00000009837	tnrc6c1	100	85.401	Oryzias_latipes
ENSSLDG00000025613	tnrc6c1	100	79.478	ENSORLG00020016510	tnrc6c1	100	78.856	Oryzias_latipes_hni
ENSSLDG00000025613	tnrc6c1	79	76.862	ENSORLG00015000171	tnrc6c1	98	76.070	Oryzias_latipes_hsok
ENSSLDG00000025613	tnrc6c1	100	80.970	ENSOMEG00000000357	tnrc6c1	94	81.157	Oryzias_melastigma
ENSSLDG00000025613	tnrc6c1	97	48.459	ENSOGAG00000007197	TNRC6C	94	47.995	Otolemur_garnettii
ENSSLDG00000025613	tnrc6c1	93	47.639	ENSOARG00000006041	TNRC6C	83	47.525	Ovis_aries
ENSSLDG00000025613	tnrc6c1	100	49.861	ENSPPAG00000027160	TNRC6C	100	48.806	Pan_paniscus
ENSSLDG00000025613	tnrc6c1	97	50.086	ENSPPRG00000018881	TNRC6C	99	48.802	Panthera_pardus
ENSSLDG00000025613	tnrc6c1	81	56.619	ENSPTIG00000008791	TNRC6C	68	54.888	Panthera_tigris_altaica
ENSSLDG00000025613	tnrc6c1	100	49.917	ENSPTRG00000009699	TNRC6C	100	48.862	Pan_troglodytes
ENSSLDG00000025613	tnrc6c1	100	49.972	ENSPANG00000019994	TNRC6C	100	49.138	Papio_anubis
ENSSLDG00000025613	tnrc6c1	100	56.995	ENSPKIG00000005428	tnrc6c1	100	57.381	Paramormyrops_kingsleyae
ENSSLDG00000025613	tnrc6c1	97	50.741	ENSPSIG00000018069	TNRC6C	91	50.266	Pelodiscus_sinensis
ENSSLDG00000025613	tnrc6c1	93	71.581	ENSPMGG00000022911	tnrc6c1	98	80.000	Periophthalmus_magnuspinnatus
ENSSLDG00000025613	tnrc6c1	100	49.862	ENSPEMG00000009785	Tnrc6c	94	47.443	Peromyscus_maniculatus_bairdii
ENSSLDG00000025613	tnrc6c1	54	39.901	ENSPCIG00000017421	-	89	38.389	Phascolarctos_cinereus
ENSSLDG00000025613	tnrc6c1	100	84.601	ENSPFOG00000012560	tnrc6c1	99	75.751	Poecilia_formosa
ENSSLDG00000025613	tnrc6c1	100	84.539	ENSPLAG00000021055	tnrc6c1	100	84.601	Poecilia_latipinna
ENSSLDG00000025613	tnrc6c1	100	48.993	ENSPPYG00000008679	TNRC6C	88	47.847	Pongo_abelii
ENSSLDG00000025613	tnrc6c1	72	66.892	ENSPCAG00000012510	TNRC6C	84	66.892	Procavia_capensis
ENSSLDG00000025613	tnrc6c1	97	50.430	ENSPCOG00000021451	TNRC6C	94	49.882	Propithecus_coquereli
ENSSLDG00000025613	tnrc6c1	93	62.500	ENSPVAG00000002008	TNRC6C	87	62.308	Pteropus_vampyrus
ENSSLDG00000025613	tnrc6c1	100	84.381	ENSPNYG00000014477	tnrc6c1	100	84.152	Pundamilia_nyererei
ENSSLDG00000025613	tnrc6c1	97	49.857	ENSRNOG00000022395	Tnrc6c	94	49.497	Rattus_norvegicus
ENSSLDG00000025613	tnrc6c1	100	50.222	ENSRBIG00000027777	TNRC6C	100	49.112	Rhinopithecus_bieti
ENSSLDG00000025613	tnrc6c1	100	50.222	ENSRROG00000042912	TNRC6C	100	49.112	Rhinopithecus_roxellana
ENSSLDG00000025613	tnrc6c1	100	48.806	ENSSBOG00000023981	TNRC6C	100	47.554	Saimiri_boliviensis_boliviensis
ENSSLDG00000025613	tnrc6c1	53	62.316	ENSSHAG00000018330	-	100	62.000	Sarcophilus_harrisii
ENSSLDG00000025613	tnrc6c1	88	63.827	ENSSFOG00015004735	-	99	66.582	Scleropages_formosus
ENSSLDG00000025613	tnrc6c1	100	61.880	ENSSFOG00015006475	tnrc6c1	92	61.905	Scleropages_formosus
ENSSLDG00000025613	tnrc6c1	100	89.812	ENSSMAG00000012761	tnrc6c1	100	89.875	Scophthalmus_maximus
ENSSLDG00000025613	tnrc6c1	100	99.686	ENSSDUG00000002366	tnrc6c1	93	99.686	Seriola_dumerili
ENSSLDG00000025613	tnrc6c1	69	62.791	ENSSARG00000006816	TNRC6C	82	62.551	Sorex_araneus
ENSSLDG00000025613	tnrc6c1	85	52.322	ENSSPUG00000007341	TNRC6C	88	52.471	Sphenodon_punctatus
ENSSLDG00000025613	tnrc6c1	98	90.684	ENSSPAG00000014977	tnrc6c1	92	91.030	Stegastes_partitus
ENSSLDG00000025613	tnrc6c1	92	59.114	ENSSSCG00000034373	TNRC6C	96	53.975	Sus_scrofa
ENSSLDG00000025613	tnrc6c1	97	50.796	ENSTGUG00000007733	TNRC6C	91	50.472	Taeniopygia_guttata
ENSSLDG00000025613	tnrc6c1	100	82.103	ENSTRUG00000011685	tnrc6c1	100	77.308	Takifugu_rubripes
ENSSLDG00000025613	tnrc6c1	100	75.364	ENSTNIG00000005273	tnrc6c1	100	75.775	Tetraodon_nigroviridis
ENSSLDG00000025613	tnrc6c1	68	50.169	ENSTBEG00000005046	TNRC6C	100	49.216	Tupaia_belangeri
ENSSLDG00000025613	tnrc6c1	97	50.315	ENSTTRG00000010828	TNRC6C	91	50.000	Tursiops_truncatus
ENSSLDG00000025613	tnrc6c1	97	49.137	ENSUMAG00000013614	TNRC6C	84	48.335	Ursus_maritimus
ENSSLDG00000025613	tnrc6c1	53	51.180	ENSVPAG00000006765	-	96	52.013	Vicugna_pacos
ENSSLDG00000025613	tnrc6c1	97	51.094	ENSVVUG00000015268	TNRC6C	100	49.608	Vulpes_vulpes
ENSSLDG00000025613	tnrc6c1	97	49.914	ENSXETG00000019470	tnrc6c	97	49.003	Xenopus_tropicalis
ENSSLDG00000025613	tnrc6c1	100	84.395	ENSXMAG00000025971	tnrc6c1	100	84.457	Xiphophorus_maculatus