EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000025649 (Gene tree)
Gene ID: -
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor subunit 3
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 15268 bases
Position: chrPEQF01099436.1:256769-272036
Accession: 111645908
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000033531	Suf	PF05843.14	8.3e-85	1	1
ENSSLDP00000033530	Suf	PF05843.14	8.8e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000034462	-	6468	XM_023395243	ENSSLDP00000033530	716 (aa)	XP_023251011	UPI000C6F9F3A
ENSSLDT00000034463	-	2067	-	ENSSLDP00000033531	688 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000025649's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000025649's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000025649	cstf3	100	91.226	ENSG00000176102	CSTF3	100	91.226	Homo_sapiens
ENSSLDG00000025649	cstf3	100	99.302	ENSAPOG00000014054	cstf3	100	99.302	Acanthochromis_polyacanthus
ENSSLDG00000025649	cstf3	99	91.667	ENSAMEG00000007187	CSTF3	98	91.667	Ailuropoda_melanoleuca
ENSSLDG00000025649	cstf3	91	93.740	ENSACIG00000005539	cstf3	100	93.740	Amphilophus_citrinellus
ENSSLDG00000025649	cstf3	100	99.302	ENSAOCG00000010930	cstf3	100	99.302	Amphiprion_ocellaris
ENSSLDG00000025649	cstf3	100	99.302	ENSAPEG00000007903	cstf3	100	99.302	Amphiprion_percula
ENSSLDG00000025649	cstf3	100	99.022	ENSATEG00000000190	cstf3	100	99.022	Anabas_testudineus
ENSSLDG00000025649	cstf3	99	91.949	ENSAPLG00000007217	CSTF3	100	91.949	Anas_platyrhynchos
ENSSLDG00000025649	cstf3	100	91.783	ENSACAG00000002823	CSTF3	100	91.783	Anolis_carolinensis
ENSSLDG00000025649	cstf3	100	91.226	ENSANAG00000020699	CSTF3	100	91.226	Aotus_nancymaae
ENSSLDG00000025649	cstf3	100	98.184	ENSACLG00000007820	cstf3	100	98.184	Astatotilapia_calliptera
ENSSLDG00000025649	cstf3	100	93.651	ENSAMXG00000014198	cstf3	100	93.315	Astyanax_mexicanus
ENSSLDG00000025649	cstf3	100	91.226	ENSBTAG00000008617	CSTF3	100	91.543	Bos_taurus
ENSSLDG00000025649	cstf3	99	48.148	WBGene00006307	suf-1	99	48.234	Caenorhabditis_elegans
ENSSLDG00000025649	cstf3	100	91.226	ENSCJAG00000005533	CSTF3	100	91.226	Callithrix_jacchus
ENSSLDG00000025649	cstf3	100	91.226	ENSCAFG00000007264	CSTF3	100	91.226	Canis_familiaris
ENSSLDG00000025649	cstf3	99	91.808	ENSCAFG00020002715	CSTF3	98	91.808	Canis_lupus_dingo
ENSSLDG00000025649	cstf3	100	90.580	ENSCHIG00000016418	CSTF3	100	91.200	Capra_hircus
ENSSLDG00000025649	cstf3	99	92.090	ENSTSYG00000000451	CSTF3	99	96.659	Carlito_syrichta
ENSSLDG00000025649	cstf3	86	89.260	ENSCAPG00000010958	CSTF3	98	89.260	Cavia_aperea
ENSSLDG00000025649	cstf3	100	91.365	ENSCPOG00000005545	CSTF3	100	91.457	Cavia_porcellus
ENSSLDG00000025649	cstf3	100	91.226	ENSCCAG00000024790	CSTF3	96	96.659	Cebus_capucinus
ENSSLDG00000025649	cstf3	100	91.226	ENSCATG00000007080	CSTF3	100	91.226	Cercocebus_atys
ENSSLDG00000025649	cstf3	100	91.226	ENSCLAG00000016179	CSTF3	100	91.226	Chinchilla_lanigera
ENSSLDG00000025649	cstf3	78	97.368	ENSCHOG00000002497	CSTF3	79	97.368	Choloepus_hoffmanni
ENSSLDG00000025649	cstf3	100	91.504	ENSCPBG00000006753	CSTF3	100	91.504	Chrysemys_picta_bellii
ENSSLDG00000025649	cstf3	99	61.581	ENSCING00000006401	-	99	61.720	Ciona_intestinalis
ENSSLDG00000025649	cstf3	100	60.684	ENSCSAVG00000004851	-	100	61.259	Ciona_savignyi
ENSSLDG00000025649	cstf3	100	91.226	ENSCANG00000035468	CSTF3	100	91.226	Colobus_angolensis_palliatus
ENSSLDG00000025649	cstf3	100	91.086	ENSCGRG00001014773	Cstf3	100	91.086	Cricetulus_griseus_chok1gshd
ENSSLDG00000025649	cstf3	100	91.086	ENSCGRG00000004142	Cstf3	100	91.086	Cricetulus_griseus_crigri
ENSSLDG00000025649	cstf3	100	97.486	ENSCSEG00000014283	cstf3	100	97.486	Cynoglossus_semilaevis
ENSSLDG00000025649	cstf3	100	97.067	ENSCVAG00000019739	cstf3	100	97.067	Cyprinodon_variegatus
ENSSLDG00000025649	cstf3	100	94.561	ENSDARG00000018904	cstf3	100	94.561	Danio_rerio
ENSSLDG00000025649	cstf3	99	91.949	ENSDNOG00000007366	CSTF3	99	91.949	Dasypus_novemcinctus
ENSSLDG00000025649	cstf3	100	84.438	ENSDORG00000005898	Cstf3	99	84.203	Dipodomys_ordii
ENSSLDG00000025649	cstf3	99	56.145	FBgn0003559	su(f)	99	55.391	Drosophila_melanogaster
ENSSLDG00000025649	cstf3	87	90.468	ENSETEG00000017097	CSTF3	90	85.981	Echinops_telfairi
ENSSLDG00000025649	cstf3	87	75.000	ENSEBUG00000015459	cstf3	96	75.000	Eptatretus_burgeri
ENSSLDG00000025649	cstf3	100	90.620	ENSEASG00005019884	CSTF3	96	96.659	Equus_asinus_asinus
ENSSLDG00000025649	cstf3	100	90.620	ENSECAG00000023338	CSTF3	96	96.659	Equus_caballus
ENSSLDG00000025649	cstf3	100	86.490	ENSEEUG00000015167	CSTF3	100	86.490	Erinaceus_europaeus
ENSSLDG00000025649	cstf3	100	95.258	ENSELUG00000023393	cstf3	100	95.258	Esox_lucius
ENSSLDG00000025649	cstf3	100	91.365	ENSFCAG00000030711	CSTF3	100	91.365	Felis_catus
ENSSLDG00000025649	cstf3	94	92.438	ENSFALG00000010764	CSTF3	100	90.783	Ficedula_albicollis
ENSSLDG00000025649	cstf3	100	91.365	ENSFDAG00000012082	CSTF3	100	91.365	Fukomys_damarensis
ENSSLDG00000025649	cstf3	100	96.927	ENSFHEG00000020623	cstf3	100	96.927	Fundulus_heteroclitus
ENSSLDG00000025649	cstf3	100	94.847	ENSGMOG00000012275	cstf3	100	94.847	Gadus_morhua
ENSSLDG00000025649	cstf3	100	91.086	ENSGALG00000011685	CSTF3	100	91.086	Gallus_gallus
ENSSLDG00000025649	cstf3	100	96.927	ENSGAFG00000002181	cstf3	100	96.927	Gambusia_affinis
ENSSLDG00000025649	cstf3	100	97.905	ENSGACG00000015997	cstf3	100	97.905	Gasterosteus_aculeatus
ENSSLDG00000025649	cstf3	100	91.504	ENSGAGG00000006200	CSTF3	100	91.504	Gopherus_agassizii
ENSSLDG00000025649	cstf3	100	86.232	ENSGGOG00000026591	CSTF3	96	91.759	Gorilla_gorilla
ENSSLDG00000025649	cstf3	100	98.045	ENSHBUG00000016656	cstf3	100	98.045	Haplochromis_burtoni
ENSSLDG00000025649	cstf3	100	91.226	ENSHGLG00000017834	CSTF3	100	91.226	Heterocephalus_glaber_female
ENSSLDG00000025649	cstf3	100	91.226	ENSHGLG00100018042	CSTF3	100	91.226	Heterocephalus_glaber_male
ENSSLDG00000025649	cstf3	100	95.203	ENSHCOG00000015218	cstf3	100	93.994	Hippocampus_comes
ENSSLDG00000025649	cstf3	100	93.724	ENSIPUG00000013170	CSTF3	100	93.724	Ictalurus_punctatus
ENSSLDG00000025649	cstf3	100	91.226	ENSSTOG00000013306	CSTF3	100	91.226	Ictidomys_tridecemlineatus
ENSSLDG00000025649	cstf3	99	81.206	ENSJJAG00000018430	Cstf3	99	81.206	Jaculus_jaculus
ENSSLDG00000025649	cstf3	100	95.950	ENSKMAG00000010916	cstf3	100	95.950	Kryptolebias_marmoratus
ENSSLDG00000025649	cstf3	100	98.045	ENSLBEG00000002306	cstf3	100	98.045	Labrus_bergylta
ENSSLDG00000025649	cstf3	100	90.516	ENSLACG00000017296	CSTF3	100	90.516	Latimeria_chalumnae
ENSSLDG00000025649	cstf3	100	94.568	ENSLOCG00000004415	cstf3	100	94.568	Lepisosteus_oculatus
ENSSLDG00000025649	cstf3	100	91.226	ENSLAFG00000008712	CSTF3	100	91.226	Loxodonta_africana
ENSSLDG00000025649	cstf3	100	91.226	ENSMFAG00000029516	CSTF3	100	91.226	Macaca_fascicularis
ENSSLDG00000025649	cstf3	100	91.226	ENSMMUG00000002542	CSTF3	100	91.226	Macaca_mulatta
ENSSLDG00000025649	cstf3	100	91.226	ENSMNEG00000021807	CSTF3	100	91.226	Macaca_nemestrina
ENSSLDG00000025649	cstf3	100	91.226	ENSMLEG00000039594	CSTF3	97	94.432	Mandrillus_leucophaeus
ENSSLDG00000025649	cstf3	100	99.162	ENSMAMG00000020423	cstf3	100	99.162	Mastacembelus_armatus
ENSSLDG00000025649	cstf3	100	98.184	ENSMZEG00005012082	cstf3	100	98.184	Maylandia_zebra
ENSSLDG00000025649	cstf3	100	90.947	ENSMGAG00000001383	CSTF3	100	90.947	Meleagris_gallopavo
ENSSLDG00000025649	cstf3	100	90.947	ENSMAUG00000002487	Cstf3	100	90.947	Mesocricetus_auratus
ENSSLDG00000025649	cstf3	100	91.226	ENSMICG00000004784	CSTF3	100	91.226	Microcebus_murinus
ENSSLDG00000025649	cstf3	100	91.086	ENSMOCG00000017583	Cstf3	100	91.086	Microtus_ochrogaster
ENSSLDG00000025649	cstf3	99	98.588	ENSMMOG00000016026	cstf3	95	98.588	Mola_mola
ENSSLDG00000025649	cstf3	100	91.643	ENSMODG00000009745	-	100	91.643	Monodelphis_domestica
ENSSLDG00000025649	cstf3	100	80.362	ENSMODG00000025205	-	100	80.362	Monodelphis_domestica
ENSSLDG00000025649	cstf3	100	98.743	ENSMALG00000012050	cstf3	100	98.743	Monopterus_albus
ENSSLDG00000025649	cstf3	100	91.086	MGP_CAROLIEiJ_G0024026	Cstf3	100	91.086	Mus_caroli
ENSSLDG00000025649	cstf3	100	91.086	ENSMUSG00000027176	Cstf3	100	91.086	Mus_musculus
ENSSLDG00000025649	cstf3	100	91.086	MGP_PahariEiJ_G0025464	Cstf3	100	91.086	Mus_pahari
ENSSLDG00000025649	cstf3	100	91.086	MGP_SPRETEiJ_G0024939	Cstf3	100	91.086	Mus_spretus
ENSSLDG00000025649	cstf3	100	91.086	ENSMPUG00000011457	CSTF3	100	91.086	Mustela_putorius_furo
ENSSLDG00000025649	cstf3	100	88.440	ENSMLUG00000026022	-	100	88.440	Myotis_lucifugus
ENSSLDG00000025649	cstf3	99	91.808	ENSMLUG00000003073	-	99	91.808	Myotis_lucifugus
ENSSLDG00000025649	cstf3	100	91.086	ENSNGAG00000010677	Cstf3	100	91.086	Nannospalax_galili
ENSSLDG00000025649	cstf3	91	98.716	ENSNBRG00000007345	cstf3	100	98.716	Neolamprologus_brichardi
ENSSLDG00000025649	cstf3	100	91.226	ENSNLEG00000017901	CSTF3	100	91.226	Nomascus_leucogenys
ENSSLDG00000025649	cstf3	74	90.430	ENSMEUG00000005640	-	100	90.631	Notamacropus_eugenii
ENSSLDG00000025649	cstf3	66	96.078	ENSOPRG00000000199	-	64	96.078	Ochotona_princeps
ENSSLDG00000025649	cstf3	90	80.968	ENSODEG00000006311	-	97	79.403	Octodon_degus
ENSSLDG00000025649	cstf3	100	91.226	ENSODEG00000016737	-	100	91.226	Octodon_degus
ENSSLDG00000025649	cstf3	100	98.184	ENSONIG00000005563	cstf3	100	98.184	Oreochromis_niloticus
ENSSLDG00000025649	cstf3	91	90.995	ENSOANG00000015140	CSTF3	100	90.615	Ornithorhynchus_anatinus
ENSSLDG00000025649	cstf3	100	90.947	ENSOCUG00000015417	CSTF3	100	90.947	Oryctolagus_cuniculus
ENSSLDG00000025649	cstf3	100	96.369	ENSORLG00000009762	cstf3	100	96.369	Oryzias_latipes
ENSSLDG00000025649	cstf3	100	96.662	ENSORLG00020005540	cstf3	100	96.369	Oryzias_latipes_hni
ENSSLDG00000025649	cstf3	100	96.229	ENSORLG00015003551	cstf3	100	96.229	Oryzias_latipes_hsok
ENSSLDG00000025649	cstf3	100	96.788	ENSOMEG00000003848	cstf3	100	96.788	Oryzias_melastigma
ENSSLDG00000025649	cstf3	100	90.846	ENSOGAG00000010229	CSTF3	100	90.846	Otolemur_garnettii
ENSSLDG00000025649	cstf3	91	91.284	ENSOARG00000017271	CSTF3	99	91.291	Ovis_aries
ENSSLDG00000025649	cstf3	100	88.696	ENSPPAG00000027358	CSTF3	99	88.418	Pan_paniscus
ENSSLDG00000025649	cstf3	100	91.365	ENSPPRG00000016852	CSTF3	100	91.365	Panthera_pardus
ENSSLDG00000025649	cstf3	100	91.365	ENSPTIG00000008716	CSTF3	100	91.365	Panthera_tigris_altaica
ENSSLDG00000025649	cstf3	100	91.226	ENSPTRG00000003485	CSTF3	100	91.226	Pan_troglodytes
ENSSLDG00000025649	cstf3	100	91.226	ENSPANG00000013722	CSTF3	97	94.432	Papio_anubis
ENSSLDG00000025649	cstf3	100	94.142	ENSPKIG00000023648	cstf3	100	94.142	Paramormyrops_kingsleyae
ENSSLDG00000025649	cstf3	100	91.504	ENSPSIG00000009173	CSTF3	100	91.504	Pelodiscus_sinensis
ENSSLDG00000025649	cstf3	77	98.540	ENSPMGG00000000164	cstf3	99	98.540	Periophthalmus_magnuspinnatus
ENSSLDG00000025649	cstf3	100	91.086	ENSPEMG00000011481	Cstf3	100	91.086	Peromyscus_maniculatus_bairdii
ENSSLDG00000025649	cstf3	100	78.273	ENSPMAG00000007282	cstf3	100	78.750	Petromyzon_marinus
ENSSLDG00000025649	cstf3	100	89.013	ENSPCIG00000026406	-	100	91.680	Phascolarctos_cinereus
ENSSLDG00000025649	cstf3	100	76.773	ENSPCIG00000030419	-	90	77.051	Phascolarctos_cinereus
ENSSLDG00000025649	cstf3	100	97.207	ENSPFOG00000017239	cstf3	100	97.207	Poecilia_formosa
ENSSLDG00000025649	cstf3	100	97.346	ENSPLAG00000009456	cstf3	100	97.346	Poecilia_latipinna
ENSSLDG00000025649	cstf3	100	97.207	ENSPMEG00000010320	cstf3	100	97.207	Poecilia_mexicana
ENSSLDG00000025649	cstf3	100	97.067	ENSPREG00000013549	cstf3	100	97.067	Poecilia_reticulata
ENSSLDG00000025649	cstf3	100	91.226	ENSPPYG00000003375	CSTF3	100	91.226	Pongo_abelii
ENSSLDG00000025649	cstf3	71	95.819	ENSPCAG00000008025	-	71	95.819	Procavia_capensis
ENSSLDG00000025649	cstf3	100	86.957	ENSPCOG00000014417	CSTF3	100	86.212	Propithecus_coquereli
ENSSLDG00000025649	cstf3	100	86.436	ENSPVAG00000002350	CSTF3	100	86.072	Pteropus_vampyrus
ENSSLDG00000025649	cstf3	100	98.045	ENSPNYG00000018259	cstf3	100	98.045	Pundamilia_nyererei
ENSSLDG00000025649	cstf3	100	95.119	ENSPNAG00000020182	cstf3	100	95.119	Pygocentrus_nattereri
ENSSLDG00000025649	cstf3	91	90.720	ENSRNOG00000012089	Cstf3	100	90.720	Rattus_norvegicus
ENSSLDG00000025649	cstf3	100	90.765	ENSRBIG00000044258	CSTF3	100	91.200	Rhinopithecus_bieti
ENSSLDG00000025649	cstf3	100	91.226	ENSRROG00000043450	CSTF3	100	91.226	Rhinopithecus_roxellana
ENSSLDG00000025649	cstf3	100	91.226	ENSSBOG00000024764	CSTF3	98	96.659	Saimiri_boliviensis_boliviensis
ENSSLDG00000025649	cstf3	99	92.090	ENSSHAG00000018128	-	99	92.090	Sarcophilus_harrisii
ENSSLDG00000025649	cstf3	100	81.476	ENSSHAG00000003135	-	99	81.476	Sarcophilus_harrisii
ENSSLDG00000025649	cstf3	100	94.282	ENSSFOG00015022133	cstf3	100	94.282	Scleropages_formosus
ENSSLDG00000025649	cstf3	100	98.184	ENSSMAG00000002197	cstf3	100	98.184	Scophthalmus_maximus
ENSSLDG00000025649	cstf3	100	99.721	ENSSDUG00000020426	cstf3	100	99.721	Seriola_dumerili
ENSSLDG00000025649	cstf3	100	90.947	ENSSARG00000000391	CSTF3	100	90.947	Sorex_araneus
ENSSLDG00000025649	cstf3	99	90.159	ENSSPUG00000010546	CSTF3	100	91.606	Sphenodon_punctatus
ENSSLDG00000025649	cstf3	100	99.162	ENSSPAG00000004958	cstf3	100	99.162	Stegastes_partitus
ENSSLDG00000025649	cstf3	100	90.188	ENSSSCG00000040954	CSTF3	99	91.024	Sus_scrofa
ENSSLDG00000025649	cstf3	99	91.667	ENSTGUG00000005010	CSTF3	100	91.667	Taeniopygia_guttata
ENSSLDG00000025649	cstf3	100	96.508	ENSTRUG00000004959	cstf3	100	96.508	Takifugu_rubripes
ENSSLDG00000025649	cstf3	99	97.599	ENSTNIG00000013811	cstf3	99	97.599	Tetraodon_nigroviridis
ENSSLDG00000025649	cstf3	91	88.431	ENSTBEG00000001544	CSTF3	90	88.629	Tupaia_belangeri
ENSSLDG00000025649	cstf3	100	88.440	ENSTTRG00000016366	CSTF3	100	88.440	Tursiops_truncatus
ENSSLDG00000025649	cstf3	99	91.525	ENSUMAG00000018971	CSTF3	100	90.880	Ursus_maritimus
ENSSLDG00000025649	cstf3	100	91.086	ENSVPAG00000007800	CSTF3	100	91.086	Vicugna_pacos
ENSSLDG00000025649	cstf3	99	91.808	ENSVVUG00000014938	CSTF3	100	91.200	Vulpes_vulpes
ENSSLDG00000025649	cstf3	66	42.324	ENSXETG00000017946	-	99	42.324	Xenopus_tropicalis
ENSSLDG00000025649	cstf3	91	75.507	ENSXETG00000021399	cstf3	100	76.861	Xenopus_tropicalis
ENSSLDG00000025649	cstf3	91	96.950	ENSXCOG00000011741	cstf3	100	96.950	Xiphophorus_couchianus
ENSSLDG00000025649	cstf3	100	97.067	ENSXMAG00000009545	cstf3	100	97.067	Xiphophorus_maculatus