EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000025676 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger and SCAN domain-containing protein 2-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 2674 bases
Position: chrPEQF01099436.1:1246730-1249403
Accession: 111645939
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000033568	zf-C2H2	PF00096.26	3.8e-35	1	6
ENSSLDP00000033568	zf-C2H2	PF00096.26	3.8e-35	2	6
ENSSLDP00000033568	zf-C2H2	PF00096.26	3.8e-35	3	6
ENSSLDP00000033568	zf-C2H2	PF00096.26	3.8e-35	4	6
ENSSLDP00000033568	zf-C2H2	PF00096.26	3.8e-35	5	6
ENSSLDP00000033568	zf-C2H2	PF00096.26	3.8e-35	6	6
ENSSLDP00000033568	zf-met	PF12874.7	5.4e-12	1	3
ENSSLDP00000033568	zf-met	PF12874.7	5.4e-12	2	3
ENSSLDP00000033568	zf-met	PF12874.7	5.4e-12	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000034500	-	1495	XM_023395287	ENSSLDP00000033568	370 (aa)	XP_023251055	UPI000C6F7787

Gene Model

Click here to download ENSSLDG00000025676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000025676's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000025676	-	52	47.482	ENSSLDG00000016301	-	91	47.482
ENSSLDG00000025676	-	98	39.050	ENSSLDG00000005999	-	97	39.050
ENSSLDG00000025676	-	55	45.522	ENSSLDG00000006994	-	95	45.522
ENSSLDG00000025676	-	55	48.750	ENSSLDG00000012821	znf236	56	48.276
ENSSLDG00000025676	-	98	46.847	ENSSLDG00000001850	-	99	46.847
ENSSLDG00000025676	-	54	45.833	ENSSLDG00000004098	-	99	45.833
ENSSLDG00000025676	-	55	40.964	ENSSLDG00000013823	gfi1b	53	40.964
ENSSLDG00000025676	-	99	46.199	ENSSLDG00000021127	-	72	46.199
ENSSLDG00000025676	-	85	35.762	ENSSLDG00000000464	-	91	35.762
ENSSLDG00000025676	-	56	45.029	ENSSLDG00000000859	-	90	45.029
ENSSLDG00000025676	-	99	49.133	ENSSLDG00000000376	-	96	49.133
ENSSLDG00000025676	-	77	50.867	ENSSLDG00000007756	-	99	50.867
ENSSLDG00000025676	-	51	50.467	ENSSLDG00000012036	-	95	49.351
ENSSLDG00000025676	-	52	49.704	ENSSLDG00000001860	-	83	49.704
ENSSLDG00000025676	-	59	39.286	ENSSLDG00000025265	znf526	50	38.971
ENSSLDG00000025676	-	84	50.000	ENSSLDG00000007524	-	99	50.000
ENSSLDG00000025676	-	64	37.714	ENSSLDG00000021177	zbtb41	61	37.714
ENSSLDG00000025676	-	99	43.478	ENSSLDG00000020990	-	97	36.915
ENSSLDG00000025676	-	76	53.846	ENSSLDG00000008645	-	99	53.846
ENSSLDG00000025676	-	86	42.353	ENSSLDG00000017718	zbtb48	69	42.353
ENSSLDG00000025676	-	55	50.282	ENSSLDG00000013760	-	97	49.708
ENSSLDG00000025676	-	50	49.451	ENSSLDG00000010390	-	81	49.451
ENSSLDG00000025676	-	60	40.816	ENSSLDG00000013353	prdm5	80	40.816
ENSSLDG00000025676	-	53	49.704	ENSSLDG00000000352	-	83	49.704
ENSSLDG00000025676	-	76	48.824	ENSSLDG00000018493	-	96	48.824
ENSSLDG00000025676	-	82	47.436	ENSSLDG00000012133	-	95	49.708
ENSSLDG00000025676	-	58	35.507	ENSSLDG00000002515	-	84	35.507
ENSSLDG00000025676	-	53	50.365	ENSSLDG00000002756	-	80	50.365
ENSSLDG00000025676	-	71	39.073	ENSSLDG00000017138	znf384l	53	37.209
ENSSLDG00000025676	-	76	46.552	ENSSLDG00000005850	-	93	50.877
ENSSLDG00000025676	-	85	44.366	ENSSLDG00000000203	-	93	51.724
ENSSLDG00000025676	-	53	42.021	ENSSLDG00000006724	-	92	43.448
ENSSLDG00000025676	-	54	51.163	ENSSLDG00000012320	-	96	51.163
ENSSLDG00000025676	-	99	49.704	ENSSLDG00000020675	-	100	49.708
ENSSLDG00000025676	-	66	45.033	ENSSLDG00000002776	-	76	45.033
ENSSLDG00000025676	-	55	44.970	ENSSLDG00000000457	-	81	44.970
ENSSLDG00000025676	-	95	49.425	ENSSLDG00000005839	-	98	49.425
ENSSLDG00000025676	-	67	42.529	ENSSLDG00000006288	-	98	42.529
ENSSLDG00000025676	-	62	41.958	ENSSLDG00000004005	-	89	40.230
ENSSLDG00000025676	-	56	38.983	ENSSLDG00000018521	znf646	58	38.983
ENSSLDG00000025676	-	60	43.750	ENSSLDG00000007568	-	91	43.750
ENSSLDG00000025676	-	100	45.000	ENSSLDG00000020655	-	99	45.000
ENSSLDG00000025676	-	61	43.671	ENSSLDG00000020455	-	93	47.674
ENSSLDG00000025676	-	63	39.286	ENSSLDG00000015116	-	89	39.286
ENSSLDG00000025676	-	62	37.725	ENSSLDG00000024295	ZNF319	86	42.446
ENSSLDG00000025676	-	77	50.000	ENSSLDG00000018598	-	99	50.000
ENSSLDG00000025676	-	55	42.262	ENSSLDG00000004485	-	66	42.262
ENSSLDG00000025676	-	54	40.000	ENSSLDG00000005670	-	90	40.000
ENSSLDG00000025676	-	69	50.292	ENSSLDG00000017937	-	95	50.292

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000025676	-	99	77.151	ENSAPOG00000021966	-	99	77.151	Acanthochromis_polyacanthus
ENSSLDG00000025676	-	67	44.444	ENSAPOG00000023008	-	76	44.444	Acanthochromis_polyacanthus
ENSSLDG00000025676	-	56	72.000	ENSACIG00000007096	-	89	72.000	Amphilophus_citrinellus
ENSSLDG00000025676	-	53	47.682	ENSACIG00000022738	-	92	47.682	Amphilophus_citrinellus
ENSSLDG00000025676	-	99	41.667	ENSAOCG00000001971	-	99	30.584	Amphiprion_ocellaris
ENSSLDG00000025676	-	58	44.444	ENSAOCG00000016409	-	67	44.444	Amphiprion_ocellaris
ENSSLDG00000025676	-	99	43.750	ENSAOCG00000020652	-	100	43.750	Amphiprion_ocellaris
ENSSLDG00000025676	-	99	79.032	ENSAOCG00000022529	-	99	79.032	Amphiprion_ocellaris
ENSSLDG00000025676	-	72	68.649	ENSAPEG00000006572	-	79	68.817	Amphiprion_percula
ENSSLDG00000025676	-	82	39.286	ENSAPEG00000009553	-	83	42.262	Amphiprion_percula
ENSSLDG00000025676	-	58	43.860	ENSAPEG00000008746	-	67	43.860	Amphiprion_percula
ENSSLDG00000025676	-	53	44.444	ENSATEG00000014684	-	89	44.444	Anabas_testudineus
ENSSLDG00000025676	-	63	70.690	ENSATEG00000021602	-	85	70.690	Anabas_testudineus
ENSSLDG00000025676	-	61	41.667	ENSATEG00000022064	-	98	41.975	Anabas_testudineus
ENSSLDG00000025676	-	99	68.097	ENSACLG00000008374	-	99	68.097	Astatotilapia_calliptera
ENSSLDG00000025676	-	50	40.000	ENSACLG00000014365	-	97	40.000	Astatotilapia_calliptera
ENSSLDG00000025676	-	72	43.624	ENSACLG00000005795	-	86	43.624	Astatotilapia_calliptera
ENSSLDG00000025676	-	62	40.000	ENSACLG00000022482	-	78	40.000	Astatotilapia_calliptera
ENSSLDG00000025676	-	56	43.448	ENSACLG00000019482	-	74	43.448	Astatotilapia_calliptera
ENSSLDG00000025676	-	62	41.250	ENSACLG00000019349	-	69	41.250	Astatotilapia_calliptera
ENSSLDG00000025676	-	50	47.143	ENSAMXG00000007973	-	90	42.012	Astyanax_mexicanus
ENSSLDG00000025676	-	54	44.348	ENSCSEG00000019848	-	62	44.348	Cynoglossus_semilaevis
ENSSLDG00000025676	-	78	38.889	ENSCVAG00000020968	-	86	38.889	Cyprinodon_variegatus
ENSSLDG00000025676	-	56	45.324	ENSCVAG00000019097	-	63	45.324	Cyprinodon_variegatus
ENSSLDG00000025676	-	99	40.909	ENSCVAG00000000161	-	98	40.909	Cyprinodon_variegatus
ENSSLDG00000025676	-	82	51.667	ENSEBUG00000016090	-	53	51.667	Eptatretus_burgeri
ENSSLDG00000025676	-	100	39.773	ENSFHEG00000003856	-	98	32.770	Fundulus_heteroclitus
ENSSLDG00000025676	-	85	39.773	ENSFHEG00000013228	-	96	35.664	Fundulus_heteroclitus
ENSSLDG00000025676	-	100	39.773	ENSGAFG00000000549	-	98	39.773	Gambusia_affinis
ENSSLDG00000025676	-	72	42.690	ENSGAFG00000001481	-	86	42.690	Gambusia_affinis
ENSSLDG00000025676	-	55	34.000	ENSGAFG00000007532	-	89	34.000	Gambusia_affinis
ENSSLDG00000025676	-	76	44.295	ENSHBUG00000013065	-	84	44.295	Haplochromis_burtoni
ENSSLDG00000025676	-	50	45.614	ENSHBUG00000009274	-	87	45.614	Haplochromis_burtoni
ENSSLDG00000025676	-	99	67.560	ENSHBUG00000017924	-	99	67.560	Haplochromis_burtoni
ENSSLDG00000025676	-	98	46.250	ENSHCOG00000020309	-	97	46.250	Hippocampus_comes
ENSSLDG00000025676	-	99	48.780	ENSKMAG00000017903	-	98	48.780	Kryptolebias_marmoratus
ENSSLDG00000025676	-	99	46.491	ENSKMAG00000012097	-	97	46.491	Kryptolebias_marmoratus
ENSSLDG00000025676	-	69	43.077	ENSKMAG00000000802	-	92	43.077	Kryptolebias_marmoratus
ENSSLDG00000025676	-	99	67.116	ENSLBEG00000008850	-	99	67.116	Labrus_bergylta
ENSSLDG00000025676	-	54	42.241	ENSLBEG00000026457	-	93	37.500	Labrus_bergylta
ENSSLDG00000025676	-	51	47.692	ENSLOCG00000017422	-	71	47.692	Lepisosteus_oculatus
ENSSLDG00000025676	-	50	37.302	ENSMAMG00000002083	-	92	40.212	Mastacembelus_armatus
ENSSLDG00000025676	-	54	45.833	ENSMZEG00005020568	-	78	45.833	Maylandia_zebra
ENSSLDG00000025676	-	59	44.242	ENSMZEG00005012676	-	89	44.242	Maylandia_zebra
ENSSLDG00000025676	-	74	34.982	ENSMZEG00005025965	-	83	36.396	Maylandia_zebra
ENSSLDG00000025676	-	99	68.097	ENSMZEG00005011431	-	99	68.097	Maylandia_zebra
ENSSLDG00000025676	-	56	46.032	ENSMZEG00005027551	-	88	44.000	Maylandia_zebra
ENSSLDG00000025676	-	50	48.361	ENSMZEG00005025725	-	94	48.361	Maylandia_zebra
ENSSLDG00000025676	-	65	43.137	ENSMZEG00005022884	-	92	42.105	Maylandia_zebra
ENSSLDG00000025676	-	58	32.609	ENSMZEG00005025006	-	92	37.209	Maylandia_zebra
ENSSLDG00000025676	-	50	49.007	ENSMZEG00005025125	-	94	49.007	Maylandia_zebra
ENSSLDG00000025676	-	50	45.882	ENSMZEG00005028563	-	85	45.882	Maylandia_zebra
ENSSLDG00000025676	-	80	43.624	ENSMZEG00005011812	-	85	43.624	Maylandia_zebra
ENSSLDG00000025676	-	99	74.064	ENSMALG00000005696	-	100	74.648	Monopterus_albus
ENSSLDG00000025676	-	58	39.796	ENSMALG00000010959	-	86	44.509	Monopterus_albus
ENSSLDG00000025676	-	99	40.698	ENSMALG00000012840	-	98	34.228	Monopterus_albus
ENSSLDG00000025676	-	53	46.763	ENSMALG00000011756	-	60	46.763	Monopterus_albus
ENSSLDG00000025676	-	50	42.105	ENSNBRG00000024179	-	65	44.444	Neolamprologus_brichardi
ENSSLDG00000025676	-	51	46.591	ENSNBRG00000019004	-	80	46.591	Neolamprologus_brichardi
ENSSLDG00000025676	-	99	65.860	ENSNBRG00000004792	-	99	65.860	Neolamprologus_brichardi
ENSSLDG00000025676	-	50	44.737	ENSONIG00000014012	-	87	44.737	Oreochromis_niloticus
ENSSLDG00000025676	-	53	45.270	ENSONIG00000020667	-	96	45.270	Oreochromis_niloticus
ENSSLDG00000025676	-	50	40.884	ENSONIG00000012374	-	98	40.884	Oreochromis_niloticus
ENSSLDG00000025676	-	54	43.478	ENSONIG00000001986	-	96	43.478	Oreochromis_niloticus
ENSSLDG00000025676	-	99	47.297	ENSPMGG00000001672	-	93	47.297	Periophthalmus_magnuspinnatus
ENSSLDG00000025676	-	99	42.424	ENSPMGG00000011591	-	99	32.884	Periophthalmus_magnuspinnatus
ENSSLDG00000025676	-	55	44.720	ENSPMGG00000020606	-	88	44.720	Periophthalmus_magnuspinnatus
ENSSLDG00000025676	-	61	42.105	ENSPLAG00000013745	-	83	47.458	Poecilia_latipinna
ENSSLDG00000025676	-	77	50.000	ENSPLAG00000005106	-	92	50.000	Poecilia_latipinna
ENSSLDG00000025676	-	100	40.909	ENSPMEG00000004752	-	98	40.909	Poecilia_mexicana
ENSSLDG00000025676	-	84	40.102	ENSPMEG00000022651	-	96	42.105	Poecilia_mexicana
ENSSLDG00000025676	-	72	44.295	ENSPNYG00000011024	-	86	44.295	Pundamilia_nyererei
ENSSLDG00000025676	-	99	67.560	ENSPNYG00000016157	-	99	67.560	Pundamilia_nyererei
ENSSLDG00000025676	-	52	44.767	ENSPNYG00000003834	-	83	44.767	Pundamilia_nyererei
ENSSLDG00000025676	-	54	45.506	ENSPNYG00000020737	-	82	45.506	Pundamilia_nyererei
ENSSLDG00000025676	-	99	45.763	ENSPNAG00000011705	-	92	45.763	Pygocentrus_nattereri
ENSSLDG00000025676	-	76	42.222	ENSPNAG00000011660	-	66	42.222	Pygocentrus_nattereri
ENSSLDG00000025676	-	50	45.378	ENSPNAG00000025882	-	62	45.378	Pygocentrus_nattereri
ENSSLDG00000025676	-	54	47.097	ENSSFOG00015006083	-	55	47.097	Scleropages_formosus
ENSSLDG00000025676	-	99	46.591	ENSSMAG00000006902	-	99	46.591	Scophthalmus_maximus
ENSSLDG00000025676	-	99	42.373	ENSSMAG00000006155	-	97	35.340	Scophthalmus_maximus
ENSSLDG00000025676	-	52	59.391	ENSSMAG00000004429	-	94	67.358	Scophthalmus_maximus
ENSSLDG00000025676	-	63	44.516	ENSSMAG00000013663	-	91	44.516	Scophthalmus_maximus
ENSSLDG00000025676	-	100	97.027	ENSSDUG00000022035	-	100	97.027	Seriola_dumerili
ENSSLDG00000025676	-	58	45.029	ENSSDUG00000015013	-	66	45.029	Seriola_dumerili
ENSSLDG00000025676	-	54	42.568	ENSSDUG00000023764	-	95	42.568	Seriola_dumerili
ENSSLDG00000025676	-	60	46.622	ENSSPAG00000007403	-	93	46.622	Stegastes_partitus
ENSSLDG00000025676	-	84	90.286	ENSSPAG00000007691	-	78	90.286	Stegastes_partitus
ENSSLDG00000025676	-	55	44.643	ENSSPAG00000008950	-	69	40.909	Stegastes_partitus
ENSSLDG00000025676	-	76	62.989	ENSTRUG00000023491	-	99	62.989	Takifugu_rubripes
ENSSLDG00000025676	-	99	41.071	ENSTRUG00000024009	-	100	41.071	Takifugu_rubripes
ENSSLDG00000025676	-	60	38.938	ENSXCOG00000020769	-	94	38.938	Xiphophorus_couchianus
ENSSLDG00000025676	-	59	42.105	ENSXMAG00000022894	-	64	42.105	Xiphophorus_maculatus
ENSSLDG00000025676	-	84	40.102	ENSXMAG00000024973	-	99	42.105	Xiphophorus_maculatus
ENSSLDG00000025676	-	100	39.773	ENSXMAG00000028660	-	98	39.773	Xiphophorus_maculatus