EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000000056 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 8393 bases
Position: chr1:440869-449261
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000000081	zf-C2H2	PF00096.26	8e-48	1	9
ENSSMAP00000000081	zf-C2H2	PF00096.26	8e-48	2	9
ENSSMAP00000000081	zf-C2H2	PF00096.26	8e-48	3	9
ENSSMAP00000000081	zf-C2H2	PF00096.26	8e-48	4	9
ENSSMAP00000000081	zf-C2H2	PF00096.26	8e-48	5	9
ENSSMAP00000000081	zf-C2H2	PF00096.26	8e-48	6	9
ENSSMAP00000000081	zf-C2H2	PF00096.26	8e-48	7	9
ENSSMAP00000000081	zf-C2H2	PF00096.26	8e-48	8	9
ENSSMAP00000000081	zf-C2H2	PF00096.26	8e-48	9	9
ENSSMAP00000000081	zf-met	PF12874.7	2.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000000082	-	6354	-	ENSSMAP00000000081	764 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000000056's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000000056's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000000056	-	53	43.662	ENSSMAG00000009115	-	79	54.545
ENSSMAG00000000056	-	52	38.261	ENSSMAG00000009609	-	97	46.602
ENSSMAG00000000056	-	63	41.451	ENSSMAG00000009685	-	92	38.014
ENSSMAG00000000056	-	59	42.982	ENSSMAG00000021251	-	94	40.984
ENSSMAG00000000056	-	69	33.242	ENSSMAG00000015347	-	82	35.119
ENSSMAG00000000056	-	52	34.043	ENSSMAG00000007396	-	84	34.043
ENSSMAG00000000056	-	55	34.259	ENSSMAG00000013676	-	83	34.259
ENSSMAG00000000056	-	60	31.373	ENSSMAG00000014597	-	67	31.099
ENSSMAG00000000056	-	52	46.061	ENSSMAG00000006825	-	86	46.061
ENSSMAG00000000056	-	99	35.200	ENSSMAG00000013291	-	94	41.333
ENSSMAG00000000056	-	54	46.939	ENSSMAG00000006473	znf341	50	32.955
ENSSMAG00000000056	-	57	42.169	ENSSMAG00000014844	-	68	42.169
ENSSMAG00000000056	-	99	34.375	ENSSMAG00000002031	-	57	41.618
ENSSMAG00000000056	-	57	44.203	ENSSMAG00000006197	-	95	42.512
ENSSMAG00000000056	-	58	33.957	ENSSMAG00000015282	-	82	31.134
ENSSMAG00000000056	-	55	47.150	ENSSMAG00000003594	-	85	47.150
ENSSMAG00000000056	-	57	45.304	ENSSMAG00000005076	-	99	39.623
ENSSMAG00000000056	-	54	38.073	ENSSMAG00000015356	-	72	38.073
ENSSMAG00000000056	-	55	35.000	ENSSMAG00000007380	znf710b	52	35.000
ENSSMAG00000000056	-	63	37.255	ENSSMAG00000013663	-	87	46.154
ENSSMAG00000000056	-	57	32.000	ENSSMAG00000015849	znf319b	78	32.727
ENSSMAG00000000056	-	57	35.135	ENSSMAG00000018844	prdm5	79	35.224
ENSSMAG00000000056	-	54	35.862	ENSSMAG00000014864	-	87	47.312
ENSSMAG00000000056	-	78	37.984	ENSSMAG00000000183	-	76	35.676
ENSSMAG00000000056	-	55	36.301	ENSSMAG00000019207	scrt1b	68	36.301
ENSSMAG00000000056	-	70	32.278	ENSSMAG00000008308	-	76	32.000
ENSSMAG00000000056	-	52	33.636	ENSSMAG00000004252	-	91	40.816
ENSSMAG00000000056	-	52	38.095	ENSSMAG00000004429	-	98	38.095
ENSSMAG00000000056	-	59	30.458	ENSSMAG00000002391	ZNF319	91	31.678
ENSSMAG00000000056	-	62	37.168	ENSSMAG00000021271	-	66	37.168
ENSSMAG00000000056	-	52	40.306	ENSSMAG00000017045	-	57	40.306
ENSSMAG00000000056	-	62	35.915	ENSSMAG00000005122	-	77	35.915
ENSSMAG00000000056	-	52	34.286	ENSSMAG00000015041	si:dkey-7i4.5	90	36.691
ENSSMAG00000000056	-	97	34.853	ENSSMAG00000005081	-	98	34.853

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000000056	-	96	77.673	ENSATEG00000009436	-	97	77.644	Anabas_testudineus
ENSSMAG00000000056	-	97	50.803	ENSCVAG00000004222	-	94	50.580	Cyprinodon_variegatus
ENSSMAG00000000056	-	53	44.056	ENSELUG00000009654	-	68	44.366	Esox_lucius
ENSSMAG00000000056	-	96	62.239	ENSHCOG00000002898	-	100	61.791	Hippocampus_comes
ENSSMAG00000000056	-	96	67.615	ENSKMAG00000011850	-	95	68.365	Kryptolebias_marmoratus
ENSSMAG00000000056	-	56	75.897	ENSLBEG00000011986	-	96	75.897	Labrus_bergylta
ENSSMAG00000000056	-	53	84.548	ENSONIG00000008984	-	99	84.548	Oreochromis_niloticus
ENSSMAG00000000056	-	59	31.863	ENSPFOG00000018462	-	90	31.304	Poecilia_formosa
ENSSMAG00000000056	-	55	50.331	ENSSFOG00015008577	-	98	46.970	Scleropages_formosus
ENSSMAG00000000056	-	99	65.183	ENSTRUG00000005880	-	97	64.714	Takifugu_rubripes
ENSSMAG00000000056	-	52	44.242	ENSXETG00000030249	-	55	44.242	Xenopus_tropicalis