EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000000125 (Gene tree)
Gene ID: -
Gene Symbol: si:ch1073-335m2.2
Alias: -
Full Name: si:ch1073-335m2.2
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 18972 bases
Position: chr6:12761500-12780471
Accession: ZDB-GENE-081104-82
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000000181	RRM_5	PF13893.6	1.3e-08	1	2
ENSSMAP00000000181	RRM_5	PF13893.6	1.3e-08	2	2
ENSSMAP00000000181	RRM_1	PF00076.22	2e-42	1	3
ENSSMAP00000000181	RRM_1	PF00076.22	2e-42	2	3
ENSSMAP00000000181	RRM_1	PF00076.22	2e-42	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000000186	-	11780	-	ENSSMAP00000000181	3242 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000000125's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000000125's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000000125	si:ch1073-335m2.2	99	76.289	ENSSMAG00000008996	-	72	76.289

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000000125	si:ch1073-335m2.2	86	73.077	ENSG00000065526	SPEN	85	85.317	Homo_sapiens
ENSSMAG00000000125	si:ch1073-335m2.2	100	81.785	ENSAPOG00000011411	si:ch1073-335m2.2	100	81.846	Acanthochromis_polyacanthus
ENSSMAG00000000125	si:ch1073-335m2.2	75	78.804	ENSAPOG00000009853	-	98	74.384	Acanthochromis_polyacanthus
ENSSMAG00000000125	si:ch1073-335m2.2	68	78.804	ENSAMEG00000011817	SPEN	83	76.142	Ailuropoda_melanoleuca
ENSSMAG00000000125	si:ch1073-335m2.2	89	79.403	ENSAOCG00000008077	si:ch1073-335m2.2	99	79.334	Amphiprion_ocellaris
ENSSMAG00000000125	si:ch1073-335m2.2	75	78.804	ENSAOCG00000014505	-	98	74.384	Amphiprion_ocellaris
ENSSMAG00000000125	si:ch1073-335m2.2	100	81.018	ENSAPEG00000013515	si:ch1073-335m2.2	100	80.840	Amphiprion_percula
ENSSMAG00000000125	si:ch1073-335m2.2	75	78.804	ENSAPEG00000010288	-	72	74.384	Amphiprion_percula
ENSSMAG00000000125	si:ch1073-335m2.2	100	71.300	ENSATEG00000005627	-	52	71.300	Anabas_testudineus
ENSSMAG00000000125	si:ch1073-335m2.2	100	80.836	ENSATEG00000007674	si:ch1073-335m2.2	100	80.842	Anabas_testudineus
ENSSMAG00000000125	si:ch1073-335m2.2	85	73.077	ENSANAG00000034428	SPEN	61	73.077	Aotus_nancymaae
ENSSMAG00000000125	si:ch1073-335m2.2	100	69.820	ENSACLG00000016922	-	72	69.820	Astatotilapia_calliptera
ENSSMAG00000000125	si:ch1073-335m2.2	100	76.348	ENSACLG00000021433	si:ch1073-335m2.2	100	76.271	Astatotilapia_calliptera
ENSSMAG00000000125	si:ch1073-335m2.2	99	77.714	ENSAMXG00000012485	spen	99	61.832	Astyanax_mexicanus
ENSSMAG00000000125	si:ch1073-335m2.2	65	65.289	ENSBTAG00000018729	SPEN	65	65.289	Bos_taurus
ENSSMAG00000000125	si:ch1073-335m2.2	85	73.558	ENSCJAG00000008527	SPEN	58	79.429	Callithrix_jacchus
ENSSMAG00000000125	si:ch1073-335m2.2	65	59.843	ENSCAFG00000016132	-	56	60.296	Canis_familiaris
ENSSMAG00000000125	si:ch1073-335m2.2	65	67.500	ENSCHIG00000025070	SPEN	62	67.500	Capra_hircus
ENSSMAG00000000125	si:ch1073-335m2.2	58	66.667	ENSTSYG00000036016	SPEN	63	65.574	Carlito_syrichta
ENSSMAG00000000125	si:ch1073-335m2.2	84	72.596	ENSCAPG00000013803	SPEN	82	72.596	Cavia_aperea
ENSSMAG00000000125	si:ch1073-335m2.2	84	72.596	ENSCPOG00000014036	SPEN	80	72.596	Cavia_porcellus
ENSSMAG00000000125	si:ch1073-335m2.2	64	73.558	ENSCCAG00000020258	SPEN	59	73.558	Cebus_capucinus
ENSSMAG00000000125	si:ch1073-335m2.2	80	81.481	ENSCATG00000015079	SPEN	76	77.703	Cercocebus_atys
ENSSMAG00000000125	si:ch1073-335m2.2	78	73.077	ENSCLAG00000002018	SPEN	64	73.077	Chinchilla_lanigera
ENSSMAG00000000125	si:ch1073-335m2.2	88	73.558	ENSCSAG00000000841	SPEN	80	73.558	Chlorocebus_sabaeus
ENSSMAG00000000125	si:ch1073-335m2.2	85	73.558	ENSCANG00000034547	SPEN	77	73.558	Colobus_angolensis_palliatus
ENSSMAG00000000125	si:ch1073-335m2.2	100	68.000	ENSCSEG00000003915	-	87	68.000	Cynoglossus_semilaevis
ENSSMAG00000000125	si:ch1073-335m2.2	100	82.840	ENSCVAG00000016346	-	94	44.211	Cyprinodon_variegatus
ENSSMAG00000000125	si:ch1073-335m2.2	100	70.650	ENSCVAG00000009075	si:ch1073-335m2.2	100	70.864	Cyprinodon_variegatus
ENSSMAG00000000125	si:ch1073-335m2.2	98	58.578	ENSDARG00000074332	si:ch1073-335m2.2	61	58.317	Danio_rerio
ENSSMAG00000000125	si:ch1073-335m2.2	100	42.082	ENSDARG00000074245	spen	100	81.481	Danio_rerio
ENSSMAG00000000125	si:ch1073-335m2.2	87	73.077	ENSDNOG00000041948	SPEN	79	73.077	Dasypus_novemcinctus
ENSSMAG00000000125	si:ch1073-335m2.2	88	73.077	ENSDORG00000023909	Spen	62	73.077	Dipodomys_ordii
ENSSMAG00000000125	si:ch1073-335m2.2	88	66.805	ENSEASG00005015911	SPEN	84	66.805	Equus_asinus_asinus
ENSSMAG00000000125	si:ch1073-335m2.2	82	80.882	ENSECAG00000008833	SPEN	83	77.027	Equus_caballus
ENSSMAG00000000125	si:ch1073-335m2.2	57	83.721	ENSEEUG00000010255	SPEN	57	83.721	Erinaceus_europaeus
ENSSMAG00000000125	si:ch1073-335m2.2	97	67.625	ENSELUG00000007726	si:ch1073-335m2.2	99	67.441	Esox_lucius
ENSSMAG00000000125	si:ch1073-335m2.2	63	74.272	ENSFALG00000003551	SPEN	87	74.272	Ficedula_albicollis
ENSSMAG00000000125	si:ch1073-335m2.2	82	65.145	ENSFDAG00000010212	SPEN	77	65.145	Fukomys_damarensis
ENSSMAG00000000125	si:ch1073-335m2.2	100	69.559	ENSFHEG00000004544	si:ch1073-335m2.2	100	69.681	Fundulus_heteroclitus
ENSSMAG00000000125	si:ch1073-335m2.2	100	66.768	ENSGMOG00000008156	si:ch1073-335m2.2	100	66.252	Gadus_morhua
ENSSMAG00000000125	si:ch1073-335m2.2	72	67.265	ENSGMOG00000008397	-	68	79.191	Gadus_morhua
ENSSMAG00000000125	si:ch1073-335m2.2	100	70.694	ENSGAFG00000021570	si:ch1073-335m2.2	100	70.738	Gambusia_affinis
ENSSMAG00000000125	si:ch1073-335m2.2	100	76.040	ENSGACG00000001176	si:ch1073-335m2.2	100	75.565	Gasterosteus_aculeatus
ENSSMAG00000000125	si:ch1073-335m2.2	95	78.307	ENSGAGG00000020785	SPEN	71	78.307	Gopherus_agassizii
ENSSMAG00000000125	si:ch1073-335m2.2	86	73.077	ENSGGOG00000012041	SPEN	60	73.077	Gorilla_gorilla
ENSSMAG00000000125	si:ch1073-335m2.2	99	78.405	ENSHBUG00000023253	si:ch1073-335m2.2	100	78.664	Haplochromis_burtoni
ENSSMAG00000000125	si:ch1073-335m2.2	100	70.270	ENSHBUG00000020626	-	73	70.270	Haplochromis_burtoni
ENSSMAG00000000125	si:ch1073-335m2.2	70	67.083	ENSHGLG00000019259	SPEN	73	67.083	Heterocephalus_glaber_female
ENSSMAG00000000125	si:ch1073-335m2.2	67	67.083	ENSHGLG00100019294	SPEN	68	67.083	Heterocephalus_glaber_male
ENSSMAG00000000125	si:ch1073-335m2.2	97	71.027	ENSHCOG00000006004	si:ch1073-335m2.2	99	70.900	Hippocampus_comes
ENSSMAG00000000125	si:ch1073-335m2.2	95	60.938	ENSIPUG00000021668	spen	93	73.737	Ictalurus_punctatus
ENSSMAG00000000125	si:ch1073-335m2.2	96	55.756	ENSIPUG00000018212	si:ch1073-335m2.2	99	55.948	Ictalurus_punctatus
ENSSMAG00000000125	si:ch1073-335m2.2	65	65.984	ENSSTOG00000021428	SPEN	62	65.984	Ictidomys_tridecemlineatus
ENSSMAG00000000125	si:ch1073-335m2.2	87	65.323	ENSJJAG00000010882	Spen	81	65.323	Jaculus_jaculus
ENSSMAG00000000125	si:ch1073-335m2.2	100	75.100	ENSKMAG00000021725	si:ch1073-335m2.2	100	74.893	Kryptolebias_marmoratus
ENSSMAG00000000125	si:ch1073-335m2.2	99	75.897	ENSKMAG00000003882	-	71	75.897	Kryptolebias_marmoratus
ENSSMAG00000000125	si:ch1073-335m2.2	100	78.489	ENSLBEG00000020855	si:ch1073-335m2.2	100	78.428	Labrus_bergylta
ENSSMAG00000000125	si:ch1073-335m2.2	93	74.627	ENSLACG00000003258	SPEN	72	83.626	Latimeria_chalumnae
ENSSMAG00000000125	si:ch1073-335m2.2	100	73.301	ENSLOCG00000007896	si:ch1073-335m2.2	67	76.552	Lepisosteus_oculatus
ENSSMAG00000000125	si:ch1073-335m2.2	87	66.390	ENSLAFG00000004524	SPEN	82	66.390	Loxodonta_africana
ENSSMAG00000000125	si:ch1073-335m2.2	87	73.558	ENSMMUG00000008026	SPEN	79	73.558	Macaca_mulatta
ENSSMAG00000000125	si:ch1073-335m2.2	86	73.558	ENSMNEG00000042402	SPEN	78	73.558	Macaca_nemestrina
ENSSMAG00000000125	si:ch1073-335m2.2	85	73.558	ENSMLEG00000039293	SPEN	77	73.558	Mandrillus_leucophaeus
ENSSMAG00000000125	si:ch1073-335m2.2	100	80.917	ENSMAMG00000023870	si:ch1073-335m2.2	100	80.979	Mastacembelus_armatus
ENSSMAG00000000125	si:ch1073-335m2.2	100	76.355	ENSMZEG00005011762	si:ch1073-335m2.2	100	76.271	Maylandia_zebra
ENSSMAG00000000125	si:ch1073-335m2.2	90	69.820	ENSMZEG00005021491	-	69	69.820	Maylandia_zebra
ENSSMAG00000000125	si:ch1073-335m2.2	55	83.041	ENSMOCG00000016083	Spen	81	83.041	Microtus_ochrogaster
ENSSMAG00000000125	si:ch1073-335m2.2	100	77.768	ENSMMOG00000021742	si:ch1073-335m2.2	100	77.676	Mola_mola
ENSSMAG00000000125	si:ch1073-335m2.2	100	78.261	ENSMALG00000008625	-	71	73.399	Monopterus_albus
ENSSMAG00000000125	si:ch1073-335m2.2	86	83.041	MGP_PahariEiJ_G0029076	Spen	79	83.041	Mus_pahari
ENSSMAG00000000125	si:ch1073-335m2.2	84	78.075	ENSMPUG00000016317	SPEN	64	76.142	Mustela_putorius_furo
ENSSMAG00000000125	si:ch1073-335m2.2	61	81.250	ENSMLUG00000010144	SPEN	99	69.145	Myotis_lucifugus
ENSSMAG00000000125	si:ch1073-335m2.2	98	65.323	ENSNGAG00000000641	Spen	87	65.323	Nannospalax_galili
ENSSMAG00000000125	si:ch1073-335m2.2	100	75.536	ENSNBRG00000005733	si:ch1073-335m2.2	100	75.460	Neolamprologus_brichardi
ENSSMAG00000000125	si:ch1073-335m2.2	85	70.721	ENSNBRG00000022090	-	68	70.721	Neolamprologus_brichardi
ENSSMAG00000000125	si:ch1073-335m2.2	75	73.077	ENSNLEG00000007652	SPEN	77	73.077	Nomascus_leucogenys
ENSSMAG00000000125	si:ch1073-335m2.2	70	80.000	ENSMEUG00000002422	SPEN	68	80.000	Notamacropus_eugenii
ENSSMAG00000000125	si:ch1073-335m2.2	59	68.696	ENSOPRG00000015800	SPEN	57	73.659	Ochotona_princeps
ENSSMAG00000000125	si:ch1073-335m2.2	100	70.270	ENSONIG00000006573	-	99	73.561	Oreochromis_niloticus
ENSSMAG00000000125	si:ch1073-335m2.2	65	73.558	ENSOCUG00000010840	SPEN	62	73.558	Oryctolagus_cuniculus
ENSSMAG00000000125	si:ch1073-335m2.2	88	37.961	ENSORLG00000028894	-	100	37.512	Oryzias_latipes
ENSSMAG00000000125	si:ch1073-335m2.2	100	71.200	ENSORLG00000018414	si:ch1073-335m2.2	100	71.047	Oryzias_latipes
ENSSMAG00000000125	si:ch1073-335m2.2	88	37.113	ENSORLG00020007735	-	100	38.131	Oryzias_latipes_hni
ENSSMAG00000000125	si:ch1073-335m2.2	100	71.200	ENSORLG00020009351	si:ch1073-335m2.2	100	70.986	Oryzias_latipes_hni
ENSSMAG00000000125	si:ch1073-335m2.2	100	71.007	ENSORLG00015005537	si:ch1073-335m2.2	100	70.792	Oryzias_latipes_hsok
ENSSMAG00000000125	si:ch1073-335m2.2	100	40.476	ENSORLG00015022085	-	100	41.073	Oryzias_latipes_hsok
ENSSMAG00000000125	si:ch1073-335m2.2	100	72.278	ENSOMEG00000004509	si:ch1073-335m2.2	100	72.309	Oryzias_melastigma
ENSSMAG00000000125	si:ch1073-335m2.2	100	40.319	ENSOMEG00000007639	-	94	49.509	Oryzias_melastigma
ENSSMAG00000000125	si:ch1073-335m2.2	84	80.447	ENSOGAG00000025110	SPEN	83	66.667	Otolemur_garnettii
ENSSMAG00000000125	si:ch1073-335m2.2	85	74.627	ENSOARG00000008477	SPEN	60	74.627	Ovis_aries
ENSSMAG00000000125	si:ch1073-335m2.2	85	73.077	ENSPPAG00000035690	SPEN	78	73.077	Pan_paniscus
ENSSMAG00000000125	si:ch1073-335m2.2	86	73.077	ENSPTRG00000000210	SPEN	78	73.077	Pan_troglodytes
ENSSMAG00000000125	si:ch1073-335m2.2	85	73.558	ENSPANG00000006293	SPEN	77	73.558	Papio_anubis
ENSSMAG00000000125	si:ch1073-335m2.2	97	92.857	ENSPKIG00000010492	si:ch1073-335m2.2	71	92.857	Paramormyrops_kingsleyae
ENSSMAG00000000125	si:ch1073-335m2.2	100	46.082	ENSPKIG00000002617	SPEN	91	70.076	Paramormyrops_kingsleyae
ENSSMAG00000000125	si:ch1073-335m2.2	73	81.356	ENSPSIG00000008026	SPEN	97	72.222	Pelodiscus_sinensis
ENSSMAG00000000125	si:ch1073-335m2.2	100	71.271	ENSPFOG00000017986	si:ch1073-335m2.2	100	71.201	Poecilia_formosa
ENSSMAG00000000125	si:ch1073-335m2.2	100	71.297	ENSPLAG00000016625	si:ch1073-335m2.2	100	71.429	Poecilia_latipinna
ENSSMAG00000000125	si:ch1073-335m2.2	100	69.058	ENSPMEG00000006764	-	92	70.833	Poecilia_mexicana
ENSSMAG00000000125	si:ch1073-335m2.2	100	71.363	ENSPMEG00000002674	si:ch1073-335m2.2	100	71.354	Poecilia_mexicana
ENSSMAG00000000125	si:ch1073-335m2.2	100	71.245	ENSPREG00000005357	si:ch1073-335m2.2	100	71.437	Poecilia_reticulata
ENSSMAG00000000125	si:ch1073-335m2.2	99	74.747	ENSPREG00000010399	-	92	71.212	Poecilia_reticulata
ENSSMAG00000000125	si:ch1073-335m2.2	86	73.077	ENSPPYG00000001834	SPEN	78	73.077	Pongo_abelii
ENSSMAG00000000125	si:ch1073-335m2.2	57	73.077	ENSPCAG00000009543	SPEN	56	73.077	Procavia_capensis
ENSSMAG00000000125	si:ch1073-335m2.2	62	81.287	ENSPVAG00000013794	SPEN	56	81.287	Pteropus_vampyrus
ENSSMAG00000000125	si:ch1073-335m2.2	100	70.270	ENSPNYG00000012379	-	73	70.270	Pundamilia_nyererei
ENSSMAG00000000125	si:ch1073-335m2.2	100	76.287	ENSPNYG00000009042	si:ch1073-335m2.2	100	76.209	Pundamilia_nyererei
ENSSMAG00000000125	si:ch1073-335m2.2	100	57.708	ENSPNAG00000011452	si:ch1073-335m2.2	100	57.560	Pygocentrus_nattereri
ENSSMAG00000000125	si:ch1073-335m2.2	51	81.065	ENSPNAG00000020795	spen	88	67.925	Pygocentrus_nattereri
ENSSMAG00000000125	si:ch1073-335m2.2	88	73.558	ENSRBIG00000039654	SPEN	82	73.558	Rhinopithecus_bieti
ENSSMAG00000000125	si:ch1073-335m2.2	85	73.558	ENSRROG00000035686	SPEN	77	73.558	Rhinopithecus_roxellana
ENSSMAG00000000125	si:ch1073-335m2.2	66	52.313	ENSSBOG00000028770	SPEN	66	52.853	Saimiri_boliviensis_boliviensis
ENSSMAG00000000125	si:ch1073-335m2.2	69	80.117	ENSSHAG00000004960	SPEN	99	69.331	Sarcophilus_harrisii
ENSSMAG00000000125	si:ch1073-335m2.2	100	46.659	ENSSFOG00015010267	si:ch1073-335m2.2	74	57.143	Scleropages_formosus
ENSSMAG00000000125	si:ch1073-335m2.2	100	79.891	ENSSDUG00000003476	-	94	75.369	Seriola_dumerili
ENSSMAG00000000125	si:ch1073-335m2.2	100	87.042	ENSSDUG00000008416	si:ch1073-335m2.2	100	86.614	Seriola_dumerili
ENSSMAG00000000125	si:ch1073-335m2.2	99	79.891	ENSSLDG00000012950	-	92	68.045	Seriola_lalandi_dorsalis
ENSSMAG00000000125	si:ch1073-335m2.2	82	74.882	ENSSPUG00000001866	-	68	74.882	Sphenodon_punctatus
ENSSMAG00000000125	si:ch1073-335m2.2	100	70.270	ENSSPAG00000006014	-	92	69.697	Stegastes_partitus
ENSSMAG00000000125	si:ch1073-335m2.2	100	82.634	ENSSPAG00000012454	si:ch1073-335m2.2	100	82.634	Stegastes_partitus
ENSSMAG00000000125	si:ch1073-335m2.2	77	44.899	ENSSSCG00000034484	SPEN	83	45.165	Sus_scrofa
ENSSMAG00000000125	si:ch1073-335m2.2	88	71.151	ENSTRUG00000021008	si:ch1073-335m2.2	100	70.829	Takifugu_rubripes
ENSSMAG00000000125	si:ch1073-335m2.2	100	73.399	ENSTRUG00000024350	-	71	73.399	Takifugu_rubripes
ENSSMAG00000000125	si:ch1073-335m2.2	100	79.121	ENSTNIG00000010907	-	57	73.892	Tetraodon_nigroviridis
ENSSMAG00000000125	si:ch1073-335m2.2	100	72.147	ENSTNIG00000014666	si:ch1073-335m2.2	100	71.935	Tetraodon_nigroviridis
ENSSMAG00000000125	si:ch1073-335m2.2	60	83.041	ENSTBEG00000003628	SPEN	54	83.041	Tupaia_belangeri
ENSSMAG00000000125	si:ch1073-335m2.2	73	74.129	ENSTTRG00000015704	SPEN	63	74.129	Tursiops_truncatus
ENSSMAG00000000125	si:ch1073-335m2.2	68	79.348	ENSUAMG00000009600	SPEN	82	76.650	Ursus_americanus
ENSSMAG00000000125	si:ch1073-335m2.2	64	79.348	ENSUMAG00000021641	SPEN	82	76.650	Ursus_maritimus
ENSSMAG00000000125	si:ch1073-335m2.2	51	78.075	ENSVVUG00000028951	SPEN	56	92.857	Vulpes_vulpes
ENSSMAG00000000125	si:ch1073-335m2.2	51	82.840	ENSXETG00000023114	SPEN	69	82.840	Xenopus_tropicalis
ENSSMAG00000000125	si:ch1073-335m2.2	100	68.498	ENSXCOG00000004516	si:ch1073-335m2.2	100	68.479	Xiphophorus_couchianus
ENSSMAG00000000125	si:ch1073-335m2.2	100	71.682	ENSXMAG00000029887	si:ch1073-335m2.2	100	71.634	Xiphophorus_maculatus
ENSSMAG00000000125	si:ch1073-335m2.2	99	82.249	ENSXMAG00000021384	-	91	69.847	Xiphophorus_maculatus