EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000000135 (Gene tree)
Gene ID: -
Gene Symbol: LSM14B (1 of many)
Alias: C20orf40|FAM61B|FLJ25473|FT005|LSM13|RAP55B|bA11M20.3
Full Name: LSM family member 14B
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 2892 bases
Position: chr11:22338108-22340999
Accession: 15887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000000197	FDF	PF09532.10	1e-13	1	1
ENSSMAP00000000197	LSM14	PF12701.7	1.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000000202	LSM14B (1 of many)-201	2028	-	ENSSMAP00000000197	389 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000000135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000000135's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000000135	LSM14B	90	50.416	ENSSMAG00000012725	lsm14b	99	47.500
ENSSMAG00000000135	LSM14B	61	51.786	ENSSMAG00000019398	lsm14aa	92	37.277
ENSSMAG00000000135	LSM14B	92	37.317	ENSSMAG00000009782	lsm14ab	90	39.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000000135	LSM14B	92	52.603	ENSG00000149657	LSM14B	97	52.083	Homo_sapiens
ENSSMAG00000000135	LSM14B	89	49.167	ENSAPOG00000001780	lsm14b	94	49.734	Acanthochromis_polyacanthus
ENSSMAG00000000135	LSM14B	92	46.798	ENSAMEG00000013430	LSM14B	98	47.294	Ailuropoda_melanoleuca
ENSSMAG00000000135	LSM14B	63	50.800	ENSACIG00000003147	LSM14B	97	51.128	Amphilophus_citrinellus
ENSSMAG00000000135	LSM14B	91	49.438	ENSACIG00000012266	lsm14b	97	47.230	Amphilophus_citrinellus
ENSSMAG00000000135	LSM14B	99	73.969	ENSAOCG00000006667	LSM14B	100	73.196	Amphiprion_ocellaris
ENSSMAG00000000135	LSM14B	89	49.438	ENSAOCG00000012380	lsm14b	94	49.468	Amphiprion_ocellaris
ENSSMAG00000000135	LSM14B	89	46.000	ENSAPEG00000023633	lsm14b	93	47.684	Amphiprion_percula
ENSSMAG00000000135	LSM14B	89	50.000	ENSATEG00000016603	lsm14b	95	49.867	Anabas_testudineus
ENSSMAG00000000135	LSM14B	72	67.110	ENSATEG00000015895	LSM14B	98	66.246	Anabas_testudineus
ENSSMAG00000000135	LSM14B	84	44.624	ENSAPLG00000013203	LSM14B	97	45.663	Anas_platyrhynchos
ENSSMAG00000000135	LSM14B	92	51.087	ENSACAG00000016195	LSM14B	96	51.042	Anolis_carolinensis
ENSSMAG00000000135	LSM14B	92	52.603	ENSANAG00000037915	LSM14B	97	51.823	Aotus_nancymaae
ENSSMAG00000000135	LSM14B	91	46.322	ENSACLG00000019663	lsm14b	97	47.949	Astatotilapia_calliptera
ENSSMAG00000000135	LSM14B	91	53.867	ENSAMXG00000002865	lsm14b	100	55.025	Astyanax_mexicanus
ENSSMAG00000000135	LSM14B	92	47.772	ENSBTAG00000021558	LSM14B	97	47.991	Bos_taurus
ENSSMAG00000000135	LSM14B	92	52.603	ENSCJAG00000014434	LSM14B	97	52.083	Callithrix_jacchus
ENSSMAG00000000135	LSM14B	82	45.232	ENSCAFG00000012518	LSM14B	96	45.337	Canis_familiaris
ENSSMAG00000000135	LSM14B	92	52.603	ENSCAFG00020022150	LSM14B	97	52.865	Canis_lupus_dingo
ENSSMAG00000000135	LSM14B	92	52.329	ENSCHIG00000010284	-	97	52.604	Capra_hircus
ENSSMAG00000000135	LSM14B	94	40.568	ENSCHIG00000022681	-	94	40.365	Capra_hircus
ENSSMAG00000000135	LSM14B	81	49.231	ENSTSYG00000031914	LSM14B	86	48.837	Carlito_syrichta
ENSSMAG00000000135	LSM14B	81	50.920	ENSCAPG00000013059	LSM14B	97	51.014	Cavia_aperea
ENSSMAG00000000135	LSM14B	81	51.077	ENSCPOG00000038080	LSM14B	97	51.163	Cavia_porcellus
ENSSMAG00000000135	LSM14B	92	52.603	ENSCCAG00000021267	LSM14B	97	52.083	Cebus_capucinus
ENSSMAG00000000135	LSM14B	90	36.997	ENSCCAG00000024900	-	86	38.776	Cebus_capucinus
ENSSMAG00000000135	LSM14B	92	52.055	ENSCATG00000036006	LSM14B	97	51.562	Cercocebus_atys
ENSSMAG00000000135	LSM14B	81	50.613	ENSCLAG00000003186	LSM14B	97	50.435	Chinchilla_lanigera
ENSSMAG00000000135	LSM14B	92	47.525	ENSCSAG00000015729	LSM14B	97	47.281	Chlorocebus_sabaeus
ENSSMAG00000000135	LSM14B	63	35.581	ENSCHOG00000006997	-	96	38.376	Choloepus_hoffmanni
ENSSMAG00000000135	LSM14B	92	47.146	ENSCPBG00000027065	LSM14B	97	48.463	Chrysemys_picta_bellii
ENSSMAG00000000135	LSM14B	81	50.154	ENSCANG00000036986	LSM14B	97	49.709	Colobus_angolensis_palliatus
ENSSMAG00000000135	LSM14B	92	53.279	ENSCGRG00001018399	Lsm14b	97	52.727	Cricetulus_griseus_chok1gshd
ENSSMAG00000000135	LSM14B	56	41.593	ENSCGRG00000002484	-	95	38.776	Cricetulus_griseus_crigri
ENSSMAG00000000135	LSM14B	62	41.869	ENSCGRG00000006111	-	99	42.532	Cricetulus_griseus_crigri
ENSSMAG00000000135	LSM14B	99	63.868	ENSCSEG00000020669	LSM14B	99	62.850	Cynoglossus_semilaevis
ENSSMAG00000000135	LSM14B	89	49.859	ENSCSEG00000004722	lsm14b	95	48.825	Cynoglossus_semilaevis
ENSSMAG00000000135	LSM14B	67	48.302	ENSCVAG00000012433	-	97	49.434	Cyprinodon_variegatus
ENSSMAG00000000135	LSM14B	92	52.877	ENSDARG00000025386	lsm14b	100	53.030	Danio_rerio
ENSSMAG00000000135	LSM14B	62	42.561	ENSDNOG00000025246	LSM14B	97	42.345	Dasypus_novemcinctus
ENSSMAG00000000135	LSM14B	82	51.524	ENSDORG00000016683	Lsm14b	97	42.997	Dipodomys_ordii
ENSSMAG00000000135	LSM14B	93	42.779	ENSETEG00000001869	-	97	41.667	Echinops_telfairi
ENSSMAG00000000135	LSM14B	57	44.156	ENSETEG00000011188	-	97	43.277	Echinops_telfairi
ENSSMAG00000000135	LSM14B	63	44.622	ENSEASG00005023218	LSM14B	96	44.444	Equus_asinus_asinus
ENSSMAG00000000135	LSM14B	92	52.877	ENSECAG00000010659	LSM14B	97	52.865	Equus_caballus
ENSSMAG00000000135	LSM14B	54	61.616	ENSEEUG00000007331	LSM14B	67	62.626	Erinaceus_europaeus
ENSSMAG00000000135	LSM14B	91	58.192	ENSELUG00000016299	LSM14B	100	58.612	Esox_lucius
ENSSMAG00000000135	LSM14B	97	56.992	ENSELUG00000005780	lsm14b	97	56.728	Esox_lucius
ENSSMAG00000000135	LSM14B	92	52.877	ENSFCAG00000003248	LSM14B	97	52.604	Felis_catus
ENSSMAG00000000135	LSM14B	82	45.333	ENSFALG00000010618	LSM14B	97	46.329	Ficedula_albicollis
ENSSMAG00000000135	LSM14B	81	50.462	ENSFDAG00000002214	LSM14B	97	50.000	Fukomys_damarensis
ENSSMAG00000000135	LSM14B	81	64.174	ENSFHEG00000003362	LSM14B	82	63.303	Fundulus_heteroclitus
ENSSMAG00000000135	LSM14B	90	45.628	ENSFHEG00000006237	lsm14b	94	47.090	Fundulus_heteroclitus
ENSSMAG00000000135	LSM14B	98	47.396	ENSGMOG00000017115	lsm14b	98	48.303	Gadus_morhua
ENSSMAG00000000135	LSM14B	92	50.538	ENSGALG00000005125	LSM14B	97	53.213	Gallus_gallus
ENSSMAG00000000135	LSM14B	89	43.956	ENSGAFG00000020318	lsm14b	96	43.264	Gambusia_affinis
ENSSMAG00000000135	LSM14B	67	55.985	ENSGAFG00000013723	LSM14B	96	55.212	Gambusia_affinis
ENSSMAG00000000135	LSM14B	91	51.524	ENSGACG00000009973	lsm14b	99	50.127	Gasterosteus_aculeatus
ENSSMAG00000000135	LSM14B	61	42.739	ENSGAGG00000004106	LSM14B	95	44.487	Gopherus_agassizii
ENSSMAG00000000135	LSM14B	83	49.547	ENSGGOG00000005630	LSM14B	92	49.429	Gorilla_gorilla
ENSSMAG00000000135	LSM14B	92	52.589	ENSHGLG00000015055	LSM14B	97	52.468	Heterocephalus_glaber_female
ENSSMAG00000000135	LSM14B	81	49.846	ENSHGLG00100015273	LSM14B	97	49.419	Heterocephalus_glaber_male
ENSSMAG00000000135	LSM14B	99	64.175	ENSHCOG00000018747	LSM14B	100	64.691	Hippocampus_comes
ENSSMAG00000000135	LSM14B	63	41.463	ENSHCOG00000004867	lsm14b	89	41.036	Hippocampus_comes
ENSSMAG00000000135	LSM14B	91	53.352	ENSIPUG00000014946	lsm14b	91	55.906	Ictalurus_punctatus
ENSSMAG00000000135	LSM14B	81	50.920	ENSSTOG00000020482	LSM14B	97	50.435	Ictidomys_tridecemlineatus
ENSSMAG00000000135	LSM14B	90	53.463	ENSJJAG00000012728	Lsm14b	96	52.895	Jaculus_jaculus
ENSSMAG00000000135	LSM14B	53	62.621	ENSKMAG00000012834	-	97	62.832	Kryptolebias_marmoratus
ENSSMAG00000000135	LSM14B	89	48.603	ENSKMAG00000017524	lsm14b	93	50.270	Kryptolebias_marmoratus
ENSSMAG00000000135	LSM14B	70	54.579	ENSLBEG00000007951	LSM14B	100	54.945	Labrus_bergylta
ENSSMAG00000000135	LSM14B	92	65.468	ENSLACG00000003849	LSM14B	100	47.404	Latimeria_chalumnae
ENSSMAG00000000135	LSM14B	91	54.972	ENSLOCG00000003746	lsm14b	97	55.928	Lepisosteus_oculatus
ENSSMAG00000000135	LSM14B	82	49.848	ENSLAFG00000007492	LSM14B	97	50.716	Loxodonta_africana
ENSSMAG00000000135	LSM14B	92	52.603	ENSMFAG00000041479	LSM14B	97	52.083	Macaca_fascicularis
ENSSMAG00000000135	LSM14B	92	52.603	ENSMMUG00000014084	LSM14B	97	52.083	Macaca_mulatta
ENSSMAG00000000135	LSM14B	92	52.603	ENSMNEG00000045573	LSM14B	97	52.083	Macaca_nemestrina
ENSSMAG00000000135	LSM14B	81	49.538	ENSMLEG00000040895	LSM14B	97	49.419	Mandrillus_leucophaeus
ENSSMAG00000000135	LSM14B	89	48.045	ENSMAMG00000020539	lsm14b	98	47.208	Mastacembelus_armatus
ENSSMAG00000000135	LSM14B	99	71.392	ENSMAMG00000024124	LSM14B	100	71.392	Mastacembelus_armatus
ENSSMAG00000000135	LSM14B	91	46.322	ENSMZEG00005000987	lsm14b	97	47.692	Maylandia_zebra
ENSSMAG00000000135	LSM14B	92	65.301	ENSMZEG00005026001	LSM14B	99	66.057	Maylandia_zebra
ENSSMAG00000000135	LSM14B	84	46.450	ENSMGAG00000005300	LSM14B	96	48.739	Meleagris_gallopavo
ENSSMAG00000000135	LSM14B	92	53.279	ENSMAUG00000020700	Lsm14b	97	52.727	Mesocricetus_auratus
ENSSMAG00000000135	LSM14B	92	53.425	ENSMICG00000014675	LSM14B	97	52.865	Microcebus_murinus
ENSSMAG00000000135	LSM14B	63	39.643	ENSMOCG00000005119	-	93	38.929	Microtus_ochrogaster
ENSSMAG00000000135	LSM14B	92	52.459	ENSMOCG00000020600	Lsm14b	97	51.948	Microtus_ochrogaster
ENSSMAG00000000135	LSM14B	89	46.381	ENSMMOG00000020042	lsm14b	99	45.918	Mola_mola
ENSSMAG00000000135	LSM14B	99	61.538	ENSMMOG00000017321	LSM14B	100	63.333	Mola_mola
ENSSMAG00000000135	LSM14B	62	43.253	ENSMODG00000016690	LSM14B	96	44.805	Monodelphis_domestica
ENSSMAG00000000135	LSM14B	93	49.725	ENSMALG00000004783	lsm14b	93	49.307	Monopterus_albus
ENSSMAG00000000135	LSM14B	99	72.237	ENSMALG00000022251	LSM14B	100	72.237	Monopterus_albus
ENSSMAG00000000135	LSM14B	92	52.732	MGP_CAROLIEiJ_G0024770	Lsm14b	97	52.468	Mus_caroli
ENSSMAG00000000135	LSM14B	92	52.732	ENSMUSG00000039108	Lsm14b	97	52.468	Mus_musculus
ENSSMAG00000000135	LSM14B	92	53.005	MGP_PahariEiJ_G0026214	Lsm14b	97	52.468	Mus_pahari
ENSSMAG00000000135	LSM14B	92	52.732	MGP_SPRETEiJ_G0025693	Lsm14b	97	52.468	Mus_spretus
ENSSMAG00000000135	LSM14B	87	44.935	ENSMPUG00000007584	LSM14B	98	44.802	Mustela_putorius_furo
ENSSMAG00000000135	LSM14B	90	52.368	ENSMLUG00000000304	LSM14B	97	52.083	Myotis_lucifugus
ENSSMAG00000000135	LSM14B	81	50.462	ENSNLEG00000015757	LSM14B	97	50.000	Nomascus_leucogenys
ENSSMAG00000000135	LSM14B	65	65.468	ENSMEUG00000008267	-	72	67.857	Notamacropus_eugenii
ENSSMAG00000000135	LSM14B	92	53.151	ENSODEG00000004099	LSM14B	97	52.604	Octodon_degus
ENSSMAG00000000135	LSM14B	91	49.315	ENSONIG00000020318	lsm14b	94	50.000	Oreochromis_niloticus
ENSSMAG00000000135	LSM14B	73	46.690	ENSOANG00000003370	LSM14B	98	48.958	Ornithorhynchus_anatinus
ENSSMAG00000000135	LSM14B	82	49.085	ENSOCUG00000006279	LSM14B	97	48.703	Oryctolagus_cuniculus
ENSSMAG00000000135	LSM14B	93	62.534	ENSORLG00000028353	LSM14B	98	61.111	Oryzias_latipes
ENSSMAG00000000135	LSM14B	89	47.472	ENSORLG00000013525	lsm14b	92	48.098	Oryzias_latipes
ENSSMAG00000000135	LSM14B	63	45.788	ENSORLG00020018191	-	94	47.222	Oryzias_latipes_hni
ENSSMAG00000000135	LSM14B	89	47.472	ENSORLG00020020553	lsm14b	92	48.098	Oryzias_latipes_hni
ENSSMAG00000000135	LSM14B	89	47.472	ENSORLG00015016862	lsm14b	92	48.098	Oryzias_latipes_hsok
ENSSMAG00000000135	LSM14B	93	63.361	ENSORLG00015013157	LSM14B	98	61.905	Oryzias_latipes_hsok
ENSSMAG00000000135	LSM14B	89	47.414	ENSOMEG00000023917	lsm14b	92	47.411	Oryzias_melastigma
ENSSMAG00000000135	LSM14B	92	48.030	ENSOGAG00000003915	LSM14B	97	47.765	Otolemur_garnettii
ENSSMAG00000000135	LSM14B	83	44.624	ENSOARG00000014706	LSM14B	97	45.013	Ovis_aries
ENSSMAG00000000135	LSM14B	83	49.547	ENSPPAG00000035799	LSM14B	92	49.429	Pan_paniscus
ENSSMAG00000000135	LSM14B	92	53.151	ENSPPRG00000009197	LSM14B	97	52.865	Panthera_pardus
ENSSMAG00000000135	LSM14B	63	45.817	ENSPTIG00000021518	LSM14B	99	44.815	Panthera_tigris_altaica
ENSSMAG00000000135	LSM14B	92	52.603	ENSPTRG00000013696	LSM14B	97	52.083	Pan_troglodytes
ENSSMAG00000000135	LSM14B	92	52.329	ENSPANG00000011747	LSM14B	97	51.823	Papio_anubis
ENSSMAG00000000135	LSM14B	92	53.760	ENSPKIG00000003275	lsm14b	88	70.526	Paramormyrops_kingsleyae
ENSSMAG00000000135	LSM14B	82	49.387	ENSPSIG00000014762	LSM14B	96	51.445	Pelodiscus_sinensis
ENSSMAG00000000135	LSM14B	91	51.467	ENSPEMG00000017688	Lsm14b	97	51.269	Peromyscus_maniculatus_bairdii
ENSSMAG00000000135	LSM14B	92	53.591	ENSPCIG00000013405	LSM14B	96	54.974	Phascolarctos_cinereus
ENSSMAG00000000135	LSM14B	96	48.549	ENSPFOG00000005631	lsm14b	96	47.884	Poecilia_formosa
ENSSMAG00000000135	LSM14B	90	66.477	ENSPLAG00000005793	LSM14B	99	64.508	Poecilia_latipinna
ENSSMAG00000000135	LSM14B	96	48.556	ENSPLAG00000002449	lsm14b	96	47.520	Poecilia_latipinna
ENSSMAG00000000135	LSM14B	90	48.603	ENSPMEG00000000745	lsm14b	93	47.480	Poecilia_mexicana
ENSSMAG00000000135	LSM14B	90	67.422	ENSPMEG00000022953	LSM14B	99	65.296	Poecilia_mexicana
ENSSMAG00000000135	LSM14B	70	54.861	ENSPREG00000007828	LSM14B	99	53.472	Poecilia_reticulata
ENSSMAG00000000135	LSM14B	92	53.425	ENSPCOG00000013625	LSM14B	97	52.865	Propithecus_coquereli
ENSSMAG00000000135	LSM14B	73	43.333	ENSPVAG00000017918	LSM14B	96	42.902	Pteropus_vampyrus
ENSSMAG00000000135	LSM14B	91	55.462	ENSPNAG00000012777	lsm14b	97	56.658	Pygocentrus_nattereri
ENSSMAG00000000135	LSM14B	92	47.901	ENSRNOG00000054557	Lsm14b	97	47.642	Rattus_norvegicus
ENSSMAG00000000135	LSM14B	81	50.307	ENSRBIG00000033461	LSM14B	96	49.565	Rhinopithecus_bieti
ENSSMAG00000000135	LSM14B	83	51.205	ENSRROG00000042949	LSM14B	88	50.427	Rhinopithecus_roxellana
ENSSMAG00000000135	LSM14B	81	50.462	ENSSBOG00000032820	LSM14B	97	50.000	Saimiri_boliviensis_boliviensis
ENSSMAG00000000135	LSM14B	83	50.760	ENSSHAG00000015528	LSM14B	94	52.436	Sarcophilus_harrisii
ENSSMAG00000000135	LSM14B	91	53.239	ENSSFOG00015004627	lsm14b	100	54.337	Scleropages_formosus
ENSSMAG00000000135	LSM14B	99	80.412	ENSSDUG00000022770	LSM14B	100	79.897	Seriola_dumerili
ENSSMAG00000000135	LSM14B	90	51.117	ENSSDUG00000020977	lsm14b	99	51.145	Seriola_dumerili
ENSSMAG00000000135	LSM14B	70	64.041	ENSSLDG00000011354	-	100	67.123	Seriola_lalandi_dorsalis
ENSSMAG00000000135	LSM14B	54	41.284	ENSSARG00000007749	-	99	41.395	Sorex_araneus
ENSSMAG00000000135	LSM14B	92	46.506	ENSSPUG00000014360	LSM14B	96	46.977	Sphenodon_punctatus
ENSSMAG00000000135	LSM14B	89	49.714	ENSSPAG00000020915	lsm14b	94	49.733	Stegastes_partitus
ENSSMAG00000000135	LSM14B	70	54.386	ENSSPAG00000018854	-	100	54.386	Stegastes_partitus
ENSSMAG00000000135	LSM14B	92	51.366	ENSSSCG00000026052	LSM14B	97	41.558	Sus_scrofa
ENSSMAG00000000135	LSM14B	82	50.606	ENSTGUG00000007884	LSM14B	96	51.714	Taeniopygia_guttata
ENSSMAG00000000135	LSM14B	96	48.831	ENSTRUG00000011354	lsm14b	96	47.215	Takifugu_rubripes
ENSSMAG00000000135	LSM14B	99	69.054	ENSTRUG00000001529	LSM14B	100	69.054	Takifugu_rubripes
ENSSMAG00000000135	LSM14B	96	49.105	ENSTNIG00000002445	lsm14b	96	49.105	Tetraodon_nigroviridis
ENSSMAG00000000135	LSM14B	75	69.231	ENSTTRG00000011043	LSM14B	81	69.231	Tursiops_truncatus
ENSSMAG00000000135	LSM14B	92	47.283	ENSUAMG00000025298	LSM14B	97	47.804	Ursus_americanus
ENSSMAG00000000135	LSM14B	92	47.283	ENSUMAG00000000480	LSM14B	97	47.804	Ursus_maritimus
ENSSMAG00000000135	LSM14B	82	50.000	ENSVVUG00000015920	LSM14B	95	50.144	Vulpes_vulpes
ENSSMAG00000000135	LSM14B	85	50.742	ENSXETG00000001997	lsm14b	99	50.445	Xenopus_tropicalis
ENSSMAG00000000135	LSM14B	89	47.606	ENSXMAG00000010013	lsm14b	96	46.194	Xiphophorus_maculatus