EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000000183 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 5967 bases
Position: chr2:16602062-16608028
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000000268	zf-C2H2	PF00096.26	1.5e-48	1	9
ENSSMAP00000000268	zf-C2H2	PF00096.26	1.5e-48	2	9
ENSSMAP00000000268	zf-C2H2	PF00096.26	1.5e-48	3	9
ENSSMAP00000000268	zf-C2H2	PF00096.26	1.5e-48	4	9
ENSSMAP00000000268	zf-C2H2	PF00096.26	1.5e-48	5	9
ENSSMAP00000000268	zf-C2H2	PF00096.26	1.5e-48	6	9
ENSSMAP00000000268	zf-C2H2	PF00096.26	1.5e-48	7	9
ENSSMAP00000000268	zf-C2H2	PF00096.26	1.5e-48	8	9
ENSSMAP00000000268	zf-C2H2	PF00096.26	1.5e-48	9	9
ENSSMAP00000000268	zf-met	PF12874.7	2.3e-10	1	2
ENSSMAP00000000268	zf-met	PF12874.7	2.3e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000000273	-	3316	-	ENSSMAP00000000268	786 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000000183's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000000183's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000000183	-	71	42.857	ENSSMAG00000013291	-	91	40.351
ENSSMAG00000000183	-	51	38.281	ENSSMAG00000007561	znf236	75	40.476
ENSSMAG00000000183	-	76	35.676	ENSSMAG00000000056	-	78	37.984
ENSSMAG00000000183	-	69	38.095	ENSSMAG00000002031	-	64	38.095
ENSSMAG00000000183	-	53	32.632	ENSSMAG00000012378	znf646	68	36.620
ENSSMAG00000000183	-	50	40.559	ENSSMAG00000015347	-	81	40.559
ENSSMAG00000000183	-	50	35.870	ENSSMAG00000014864	-	82	45.902
ENSSMAG00000000183	-	55	38.489	ENSSMAG00000013828	-	61	41.196
ENSSMAG00000000183	-	94	37.383	ENSSMAG00000005081	-	99	37.304
ENSSMAG00000000183	-	66	43.529	ENSSMAG00000008428	bcl6b	63	43.529

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000000183	-	51	41.732	ENSACIG00000016182	-	82	42.632	Amphilophus_citrinellus
ENSSMAG00000000183	-	64	40.271	ENSAOCG00000014651	-	50	43.602	Amphiprion_ocellaris
ENSSMAG00000000183	-	61	40.230	ENSAPEG00000005462	-	86	40.260	Amphiprion_percula
ENSSMAG00000000183	-	54	40.210	ENSAPEG00000007389	-	87	48.913	Amphiprion_percula
ENSSMAG00000000183	-	53	35.492	ENSCSEG00000004210	-	96	40.132	Cynoglossus_semilaevis
ENSSMAG00000000183	-	100	78.526	ENSCSEG00000009915	-	100	78.529	Cynoglossus_semilaevis
ENSSMAG00000000183	-	51	39.713	ENSCVAG00000013337	-	91	46.512	Cyprinodon_variegatus
ENSSMAG00000000183	-	95	37.484	ENSDARG00000095332	si:dkey-14d8.1	97	38.710	Danio_rerio
ENSSMAG00000000183	-	54	40.461	ENSEBUG00000002185	-	79	40.461	Eptatretus_burgeri
ENSSMAG00000000183	-	52	34.641	ENSEBUG00000012053	-	91	34.641	Eptatretus_burgeri
ENSSMAG00000000183	-	59	30.924	ENSEBUG00000010794	-	98	35.694	Eptatretus_burgeri
ENSSMAG00000000183	-	85	75.789	ENSFHEG00000018423	-	99	75.188	Fundulus_heteroclitus
ENSSMAG00000000183	-	99	77.370	ENSGAFG00000018340	-	99	76.612	Gambusia_affinis
ENSSMAG00000000183	-	57	38.790	ENSGAFG00000019072	-	81	38.790	Gambusia_affinis
ENSSMAG00000000183	-	54	42.211	ENSGAFG00000011965	-	78	45.946	Gambusia_affinis
ENSSMAG00000000183	-	60	39.819	ENSHBUG00000003165	-	59	39.819	Haplochromis_burtoni
ENSSMAG00000000183	-	96	37.183	ENSIPUG00000005775	si:dkey-14d8.1	99	35.885	Ictalurus_punctatus
ENSSMAG00000000183	-	50	39.370	ENSKMAG00000005375	-	57	39.735	Kryptolebias_marmoratus
ENSSMAG00000000183	-	56	41.139	ENSKMAG00000021716	-	81	41.139	Kryptolebias_marmoratus
ENSSMAG00000000183	-	100	81.556	ENSLBEG00000001920	-	100	81.430	Labrus_bergylta
ENSSMAG00000000183	-	99	85.972	ENSMAMG00000009555	-	100	85.972	Mastacembelus_armatus
ENSSMAG00000000183	-	55	44.059	ENSMMOG00000017597	-	79	43.321	Mola_mola
ENSSMAG00000000183	-	50	43.952	ENSMALG00000021985	-	79	41.132	Monopterus_albus
ENSSMAG00000000183	-	57	41.135	ENSORLG00000026568	-	73	44.068	Oryzias_latipes
ENSSMAG00000000183	-	57	41.844	ENSORLG00020016666	-	86	41.844	Oryzias_latipes_hni
ENSSMAG00000000183	-	100	77.919	ENSORLG00015017255	-	100	77.665	Oryzias_latipes_hsok
ENSSMAG00000000183	-	50	43.609	ENSOMEG00000002268	-	86	41.581	Oryzias_melastigma
ENSSMAG00000000183	-	98	66.065	ENSPMGG00000023739	-	82	87.228	Periophthalmus_magnuspinnatus
ENSSMAG00000000183	-	99	77.284	ENSPFOG00000016324	-	99	76.463	Poecilia_formosa
ENSSMAG00000000183	-	53	36.471	ENSPLAG00000016823	-	92	45.029	Poecilia_latipinna
ENSSMAG00000000183	-	99	77.284	ENSPLAG00000001279	-	99	76.463	Poecilia_latipinna
ENSSMAG00000000183	-	99	77.481	ENSPMEG00000016548	-	99	76.590	Poecilia_mexicana
ENSSMAG00000000183	-	55	35.216	ENSPMEG00000016966	-	70	48.515	Poecilia_mexicana
ENSSMAG00000000183	-	51	45.217	ENSPNYG00000018597	-	85	41.434	Pundamilia_nyererei
ENSSMAG00000000183	-	60	43.478	ENSPNYG00000023736	-	77	43.478	Pundamilia_nyererei
ENSSMAG00000000183	-	60	42.975	ENSPNYG00000011987	-	66	42.975	Pundamilia_nyererei
ENSSMAG00000000183	-	100	89.962	ENSSDUG00000006133	-	100	89.962	Seriola_dumerili
ENSSMAG00000000183	-	100	89.327	ENSSLDG00000010460	-	100	89.327	Seriola_lalandi_dorsalis
ENSSMAG00000000183	-	62	40.104	ENSSLDG00000012133	-	87	40.449	Seriola_lalandi_dorsalis
ENSSMAG00000000183	-	51	36.905	ENSSPAG00000020960	-	96	41.509	Stegastes_partitus
ENSSMAG00000000183	-	60	41.270	ENSSPAG00000006749	-	92	39.933	Stegastes_partitus
ENSSMAG00000000183	-	100	82.973	ENSSPAG00000013319	-	99	83.100	Stegastes_partitus
ENSSMAG00000000183	-	50	39.224	ENSXCOG00000019443	-	96	44.915	Xiphophorus_couchianus
ENSSMAG00000000183	-	55	42.353	ENSXCOG00000007979	-	71	42.353	Xiphophorus_couchianus
ENSSMAG00000000183	-	54	43.003	ENSXMAG00000027347	-	78	48.276	Xiphophorus_maculatus
ENSSMAG00000000183	-	99	76.650	ENSXMAG00000024928	-	99	76.463	Xiphophorus_maculatus