EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000000262 (Gene tree)
Gene ID: -
Gene Symbol: mrpl42
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 2569 bases
Position: chr2:16644755-16647323
Accession: ZDB-GENE-101014-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000000403	MRP-S32	PF10210.9	2.1e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000000409	-	438	-	ENSSMAP00000000403	145 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000000262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000000262's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000000262	mrpl42	100	78.082	ENSAPOG00000010677	mrpl42	100	78.082	Acanthochromis_polyacanthus
ENSSMAG00000000262	mrpl42	100	82.069	ENSAOCG00000011620	mrpl42	100	82.069	Amphiprion_ocellaris
ENSSMAG00000000262	mrpl42	100	82.069	ENSAPEG00000019516	mrpl42	100	82.069	Amphiprion_percula
ENSSMAG00000000262	mrpl42	90	83.969	ENSATEG00000014106	mrpl42	100	83.969	Anabas_testudineus
ENSSMAG00000000262	mrpl42	68	72.727	ENSACAG00000012606	MRPL42	68	72.727	Anolis_carolinensis
ENSSMAG00000000262	mrpl42	100	76.552	ENSACLG00000026856	mrpl42	100	76.552	Astatotilapia_calliptera
ENSSMAG00000000262	mrpl42	84	52.459	ENSAMXG00000035149	mrpl42	81	52.459	Astyanax_mexicanus
ENSSMAG00000000262	mrpl42	99	72.222	ENSCSEG00000010067	mrpl42	99	72.222	Cynoglossus_semilaevis
ENSSMAG00000000262	mrpl42	100	71.724	ENSCVAG00000002612	mrpl42	100	71.724	Cyprinodon_variegatus
ENSSMAG00000000262	mrpl42	100	54.483	ENSDARG00000079391	mrpl42	100	54.483	Danio_rerio
ENSSMAG00000000262	mrpl42	68	49.524	ENSEBUG00000005581	mrpl42	78	49.524	Eptatretus_burgeri
ENSSMAG00000000262	mrpl42	99	66.667	ENSELUG00000001973	mrpl42	99	66.667	Esox_lucius
ENSSMAG00000000262	mrpl42	100	68.276	ENSFHEG00000018696	mrpl42	100	68.276	Fundulus_heteroclitus
ENSSMAG00000000262	mrpl42	66	76.042	ENSGMOG00000002972	mrpl42	99	76.042	Gadus_morhua
ENSSMAG00000000262	mrpl42	100	73.103	ENSGAFG00000018373	mrpl42	100	73.103	Gambusia_affinis
ENSSMAG00000000262	mrpl42	67	83.505	ENSGACG00000018811	mrpl42	100	83.505	Gasterosteus_aculeatus
ENSSMAG00000000262	mrpl42	100	75.172	ENSHBUG00000015960	mrpl42	100	75.172	Haplochromis_burtoni
ENSSMAG00000000262	mrpl42	100	66.438	ENSHCOG00000014046	mrpl42	100	66.438	Hippocampus_comes
ENSSMAG00000000262	mrpl42	92	51.449	ENSIPUG00000015395	mrpl42	92	51.449	Ictalurus_punctatus
ENSSMAG00000000262	mrpl42	100	73.793	ENSKMAG00000013671	mrpl42	100	73.793	Kryptolebias_marmoratus
ENSSMAG00000000262	mrpl42	100	77.241	ENSLBEG00000028618	mrpl42	99	77.241	Labrus_bergylta
ENSSMAG00000000262	mrpl42	100	80.000	ENSMAMG00000009737	mrpl42	100	80.000	Mastacembelus_armatus
ENSSMAG00000000262	mrpl42	100	76.552	ENSMZEG00005008545	mrpl42	96	76.552	Maylandia_zebra
ENSSMAG00000000262	mrpl42	80	70.690	ENSMMOG00000002317	mrpl42	76	70.690	Mola_mola
ENSSMAG00000000262	mrpl42	100	70.323	ENSMALG00000015794	mrpl42	96	70.323	Monopterus_albus
ENSSMAG00000000262	mrpl42	100	73.793	ENSNBRG00000003307	mrpl42	100	73.793	Neolamprologus_brichardi
ENSSMAG00000000262	mrpl42	100	75.172	ENSONIG00000011753	mrpl42	100	75.172	Oreochromis_niloticus
ENSSMAG00000000262	mrpl42	93	49.630	ENSOANG00000019984	-	92	49.630	Ornithorhynchus_anatinus
ENSSMAG00000000262	mrpl42	100	68.493	ENSORLG00000013500	mrpl42	85	68.493	Oryzias_latipes
ENSSMAG00000000262	mrpl42	100	71.918	ENSORLG00020000548	mrpl42	100	71.918	Oryzias_latipes_hni
ENSSMAG00000000262	mrpl42	100	68.966	ENSORLG00015016984	mrpl42	100	68.966	Oryzias_latipes_hsok
ENSSMAG00000000262	mrpl42	100	73.103	ENSOMEG00000010700	mrpl42	100	73.103	Oryzias_melastigma
ENSSMAG00000000262	mrpl42	100	57.534	ENSPKIG00000025457	mrpl42	100	57.534	Paramormyrops_kingsleyae
ENSSMAG00000000262	mrpl42	70	78.218	ENSPMGG00000019705	mrpl42	71	78.218	Periophthalmus_magnuspinnatus
ENSSMAG00000000262	mrpl42	68	57.843	ENSPMAG00000008091	mrpl42	66	57.843	Petromyzon_marinus
ENSSMAG00000000262	mrpl42	100	72.414	ENSPFOG00000016539	mrpl42	99	72.414	Poecilia_formosa
ENSSMAG00000000262	mrpl42	100	71.724	ENSPLAG00000001255	mrpl42	100	71.724	Poecilia_latipinna
ENSSMAG00000000262	mrpl42	100	72.414	ENSPMEG00000016462	mrpl42	100	72.414	Poecilia_mexicana
ENSSMAG00000000262	mrpl42	87	65.079	ENSPREG00000012053	mrpl42	92	65.079	Poecilia_reticulata
ENSSMAG00000000262	mrpl42	100	76.552	ENSPNYG00000009586	mrpl42	100	76.552	Pundamilia_nyererei
ENSSMAG00000000262	mrpl42	94	53.285	ENSPNAG00000020753	mrpl42	94	53.285	Pygocentrus_nattereri
ENSSMAG00000000262	mrpl42	100	86.207	ENSSDUG00000005949	mrpl42	100	86.207	Seriola_dumerili
ENSSMAG00000000262	mrpl42	100	85.517	ENSSLDG00000010159	mrpl42	100	85.517	Seriola_lalandi_dorsalis
ENSSMAG00000000262	mrpl42	100	73.103	ENSTRUG00000025949	mrpl42	99	73.103	Takifugu_rubripes
ENSSMAG00000000262	mrpl42	68	63.636	ENSXETG00000032902	mrpl42	80	63.636	Xenopus_tropicalis
ENSSMAG00000000262	mrpl42	100	63.946	ENSXCOG00000013875	mrpl42	98	63.946	Xiphophorus_couchianus