EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000000320 (Gene tree)
Gene ID: -
Gene Symbol: zfr
Alias: wu:fb25b08
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 14961 bases
Position: chr9:4099275-4114235
Accession: ZDB-GENE-030131-378
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000000514	DZF	PF07528.14	6.6e-70	1	1
ENSSMAP00000000505	DZF	PF07528.14	7.5e-70	1	1
ENSSMAP00000000514	zf-met	PF12874.7	2.4e-21	1	3
ENSSMAP00000000514	zf-met	PF12874.7	2.4e-21	2	3
ENSSMAP00000000514	zf-met	PF12874.7	2.4e-21	3	3
ENSSMAP00000000505	zf-met	PF12874.7	3e-21	1	3
ENSSMAP00000000505	zf-met	PF12874.7	3e-21	2	3
ENSSMAP00000000505	zf-met	PF12874.7	3e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000000515	-	4951	-	ENSSMAP00000000505	1080 (aa)	-	-
ENSSMAT00000000524	-	3018	-	ENSSMAP00000000514	1005 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000000320's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000000320's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000000320	zfr	96	50.586	ENSSMAG00000005377	zfr2	88	61.248

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000000320	zfr	100	76.321	ENSG00000056097	ZFR	100	75.956	Homo_sapiens
ENSSMAG00000000320	zfr	100	84.821	ENSAPOG00000009740	zfr	94	94.211	Acanthochromis_polyacanthus
ENSSMAG00000000320	zfr	100	76.294	ENSAMEG00000006184	ZFR	100	75.931	Ailuropoda_melanoleuca
ENSSMAG00000000320	zfr	100	90.198	ENSACIG00000015926	zfr	100	88.317	Amphilophus_citrinellus
ENSSMAG00000000320	zfr	100	88.776	ENSAOCG00000013876	zfr	94	94.737	Amphiprion_ocellaris
ENSSMAG00000000320	zfr	100	91.996	ENSAPEG00000024383	zfr	100	91.904	Amphiprion_percula
ENSSMAG00000000320	zfr	100	91.168	ENSATEG00000010271	zfr	100	90.800	Anabas_testudineus
ENSSMAG00000000320	zfr	78	71.062	ENSAPLG00000015627	-	91	79.167	Anas_platyrhynchos
ENSSMAG00000000320	zfr	100	74.569	ENSACAG00000007880	ZFR	100	74.387	Anolis_carolinensis
ENSSMAG00000000320	zfr	100	76.230	ENSANAG00000023333	ZFR	100	75.865	Aotus_nancymaae
ENSSMAG00000000320	zfr	100	89.495	ENSACLG00000016832	zfr	100	88.107	Astatotilapia_calliptera
ENSSMAG00000000320	zfr	98	85.542	ENSAMXG00000019511	zfr	98	86.747	Astyanax_mexicanus
ENSSMAG00000000320	zfr	100	76.299	ENSBTAG00000008414	ZFR	100	75.934	Bos_taurus
ENSSMAG00000000320	zfr	100	76.471	ENSCJAG00000018740	ZFR	100	76.078	Callithrix_jacchus
ENSSMAG00000000320	zfr	100	74.705	ENSCAFG00000018886	ZFR	99	75.673	Canis_familiaris
ENSSMAG00000000320	zfr	100	76.447	ENSCAFG00020016859	-	100	75.843	Canis_lupus_dingo
ENSSMAG00000000320	zfr	100	76.390	ENSCHIG00000007710	ZFR	100	76.026	Capra_hircus
ENSSMAG00000000320	zfr	98	75.304	ENSTSYG00000010670	ZFR	98	76.504	Carlito_syrichta
ENSSMAG00000000320	zfr	96	61.260	ENSCAPG00000015655	ZFR	99	59.192	Cavia_aperea
ENSSMAG00000000320	zfr	90	79.396	ENSCPOG00000000862	ZFR	99	70.363	Cavia_porcellus
ENSSMAG00000000320	zfr	100	76.230	ENSCCAG00000024473	ZFR	100	75.865	Cebus_capucinus
ENSSMAG00000000320	zfr	100	76.230	ENSCATG00000038311	ZFR	100	75.865	Cercocebus_atys
ENSSMAG00000000320	zfr	97	75.566	ENSCLAG00000007408	ZFR	99	76.027	Chinchilla_lanigera
ENSSMAG00000000320	zfr	100	76.230	ENSCSAG00000017180	ZFR	100	75.865	Chlorocebus_sabaeus
ENSSMAG00000000320	zfr	90	65.659	ENSCHOG00000003848	ZFR	94	65.110	Choloepus_hoffmanni
ENSSMAG00000000320	zfr	100	77.575	ENSCPBG00000024211	ZFR	100	76.846	Chrysemys_picta_bellii
ENSSMAG00000000320	zfr	100	76.230	ENSCANG00000017807	ZFR	100	75.865	Colobus_angolensis_palliatus
ENSSMAG00000000320	zfr	100	76.867	ENSCGRG00001016009	Zfr	100	75.497	Cricetulus_griseus_chok1gshd
ENSSMAG00000000320	zfr	98	75.769	ENSCGRG00000001228	Zfr	98	75.233	Cricetulus_griseus_crigri
ENSSMAG00000000320	zfr	99	89.087	ENSCSEG00000009224	zfr	100	88.690	Cynoglossus_semilaevis
ENSSMAG00000000320	zfr	99	85.950	ENSCSEG00000011169	ZFR	97	90.608	Cynoglossus_semilaevis
ENSSMAG00000000320	zfr	99	85.431	ENSCVAG00000016494	zfr	100	84.143	Cyprinodon_variegatus
ENSSMAG00000000320	zfr	98	85.629	ENSDARG00000027109	zfr	100	80.604	Danio_rerio
ENSSMAG00000000320	zfr	100	75.928	ENSDNOG00000008852	ZFR	100	75.636	Dasypus_novemcinctus
ENSSMAG00000000320	zfr	100	76.658	ENSDORG00000016643	Zfr	100	75.931	Dipodomys_ordii
ENSSMAG00000000320	zfr	100	72.187	ENSETEG00000008937	ZFR	93	80.541	Echinops_telfairi
ENSSMAG00000000320	zfr	51	61.896	ENSEBUG00000012503	-	90	61.464	Eptatretus_burgeri
ENSSMAG00000000320	zfr	100	76.299	ENSEASG00005007104	ZFR	100	75.934	Equus_asinus_asinus
ENSSMAG00000000320	zfr	82	74.501	ENSECAG00000012851	ZFR	99	73.836	Equus_caballus
ENSSMAG00000000320	zfr	83	75.223	ENSEEUG00000014206	ZFR	83	75.893	Erinaceus_europaeus
ENSSMAG00000000320	zfr	99	74.455	ENSELUG00000022743	zfr	99	73.455	Esox_lucius
ENSSMAG00000000320	zfr	100	76.299	ENSFCAG00000000354	ZFR	100	75.934	Felis_catus
ENSSMAG00000000320	zfr	100	76.143	ENSFALG00000002149	ZFR	100	76.282	Ficedula_albicollis
ENSSMAG00000000320	zfr	99	75.760	ENSFDAG00000012993	ZFR	100	75.392	Fukomys_damarensis
ENSSMAG00000000320	zfr	61	80.032	ENSFHEG00000012064	zfr	100	76.162	Fundulus_heteroclitus
ENSSMAG00000000320	zfr	95	90.541	ENSGMOG00000003967	zfr	93	88.710	Gadus_morhua
ENSSMAG00000000320	zfr	100	77.727	ENSGALG00000034488	-	100	76.545	Gallus_gallus
ENSSMAG00000000320	zfr	100	77.260	ENSGALG00000003235	-	100	77.211	Gallus_gallus
ENSSMAG00000000320	zfr	89	93.023	ENSGAFG00000016229	zfr	96	93.023	Gambusia_affinis
ENSSMAG00000000320	zfr	99	85.168	ENSGACG00000005045	zfr	100	84.363	Gasterosteus_aculeatus
ENSSMAG00000000320	zfr	95	77.071	ENSGAGG00000013544	ZFR	99	76.301	Gopherus_agassizii
ENSSMAG00000000320	zfr	100	76.412	ENSGGOG00000016302	ZFR	100	75.865	Gorilla_gorilla
ENSSMAG00000000320	zfr	100	76.138	ENSHGLG00000008088	ZFR	100	75.774	Heterocephalus_glaber_female
ENSSMAG00000000320	zfr	96	75.951	ENSHGLG00100016776	ZFR	98	76.122	Heterocephalus_glaber_male
ENSSMAG00000000320	zfr	100	85.440	ENSHCOG00000001548	zfr	100	84.890	Hippocampus_comes
ENSSMAG00000000320	zfr	100	87.368	ENSIPUG00000008192	zfr	100	81.727	Ictalurus_punctatus
ENSSMAG00000000320	zfr	100	76.374	ENSSTOG00000008742	ZFR	100	76.190	Ictidomys_tridecemlineatus
ENSSMAG00000000320	zfr	99	70.707	ENSJJAG00000023064	Zfr	98	71.283	Jaculus_jaculus
ENSSMAG00000000320	zfr	91	88.141	ENSKMAG00000009468	zfr	92	95.556	Kryptolebias_marmoratus
ENSSMAG00000000320	zfr	100	85.753	ENSLBEG00000010783	zfr	100	84.672	Labrus_bergylta
ENSSMAG00000000320	zfr	100	73.684	ENSLACG00000000831	ZFR	100	73.775	Latimeria_chalumnae
ENSSMAG00000000320	zfr	100	81.835	ENSLOCG00000006727	zfr	100	81.475	Lepisosteus_oculatus
ENSSMAG00000000320	zfr	98	75.907	ENSLAFG00000002308	ZFR	100	75.256	Loxodonta_africana
ENSSMAG00000000320	zfr	100	75.319	ENSMFAG00000042691	ZFR	100	74.954	Macaca_fascicularis
ENSSMAG00000000320	zfr	100	76.230	ENSMMUG00000001317	ZFR	100	75.865	Macaca_mulatta
ENSSMAG00000000320	zfr	100	76.230	ENSMNEG00000029441	ZFR	100	76.836	Macaca_nemestrina
ENSSMAG00000000320	zfr	100	74.064	ENSMLEG00000028503	ZFR	99	76.218	Mandrillus_leucophaeus
ENSSMAG00000000320	zfr	100	90.287	ENSMAMG00000017351	zfr	100	89.512	Mastacembelus_armatus
ENSSMAG00000000320	zfr	100	89.495	ENSMZEG00005021243	zfr	100	88.107	Maylandia_zebra
ENSSMAG00000000320	zfr	96	65.094	ENSMGAG00000002841	ZFR	85	79.167	Meleagris_gallopavo
ENSSMAG00000000320	zfr	100	77.140	ENSMAUG00000000976	Zfr	100	75.316	Mesocricetus_auratus
ENSSMAG00000000320	zfr	100	76.138	ENSMICG00000001244	ZFR	100	75.865	Microcebus_murinus
ENSSMAG00000000320	zfr	100	76.567	ENSMOCG00000018630	Zfr	100	75.225	Microtus_ochrogaster
ENSSMAG00000000320	zfr	100	82.110	ENSMMOG00000012585	zfr	100	81.302	Mola_mola
ENSSMAG00000000320	zfr	100	76.755	ENSMODG00000020412	ZFR	100	76.390	Monodelphis_domestica
ENSSMAG00000000320	zfr	95	90.541	ENSMALG00000007123	zfr	94	95.161	Monopterus_albus
ENSSMAG00000000320	zfr	100	76.294	MGP_CAROLIEiJ_G0019681	Zfr	100	77.409	Mus_caroli
ENSSMAG00000000320	zfr	100	76.385	ENSMUSG00000022201	Zfr	100	78.090	Mus_musculus
ENSSMAG00000000320	zfr	100	76.203	MGP_PahariEiJ_G0016057	Zfr	100	77.076	Mus_pahari
ENSSMAG00000000320	zfr	100	76.294	MGP_SPRETEiJ_G0020574	Zfr	100	77.409	Mus_spretus
ENSSMAG00000000320	zfr	73	73.795	ENSMPUG00000015193	-	96	74.552	Mustela_putorius_furo
ENSSMAG00000000320	zfr	97	75.943	ENSMLUG00000011797	ZFR	99	76.263	Myotis_lucifugus
ENSSMAG00000000320	zfr	100	76.412	ENSNGAG00000018328	Zfr	100	76.047	Nannospalax_galili
ENSSMAG00000000320	zfr	93	95.028	ENSNBRG00000008378	zfr	100	85.262	Neolamprologus_brichardi
ENSSMAG00000000320	zfr	100	73.949	ENSNLEG00000014098	ZFR	99	76.218	Nomascus_leucogenys
ENSSMAG00000000320	zfr	96	71.578	ENSMEUG00000010225	ZFR	99	71.469	Notamacropus_eugenii
ENSSMAG00000000320	zfr	83	82.800	ENSOPRG00000016756	ZFR	84	82.470	Ochotona_princeps
ENSSMAG00000000320	zfr	96	75.951	ENSODEG00000001990	ZFR	99	76.122	Octodon_degus
ENSSMAG00000000320	zfr	83	80.440	ENSONIG00000013960	zfr	74	83.886	Oreochromis_niloticus
ENSSMAG00000000320	zfr	96	77.493	ENSOANG00000014434	ZFR	98	77.268	Ornithorhynchus_anatinus
ENSSMAG00000000320	zfr	100	76.503	ENSOCUG00000016737	ZFR	100	76.138	Oryctolagus_cuniculus
ENSSMAG00000000320	zfr	99	84.665	ENSORLG00000017243	zfr	99	84.298	Oryzias_latipes
ENSSMAG00000000320	zfr	99	84.757	ENSORLG00020014823	zfr	99	84.389	Oryzias_latipes_hni
ENSSMAG00000000320	zfr	99	84.757	ENSORLG00015005801	zfr	99	84.389	Oryzias_latipes_hsok
ENSSMAG00000000320	zfr	99	85.308	ENSOMEG00000003336	zfr	99	83.930	Oryzias_melastigma
ENSSMAG00000000320	zfr	100	74.158	ENSOGAG00000015117	ZFR	100	73.885	Otolemur_garnettii
ENSSMAG00000000320	zfr	97	74.454	ENSOARG00000012233	ZFR	99	74.928	Ovis_aries
ENSSMAG00000000320	zfr	97	75.518	ENSPPAG00000027447	ZFR	99	76.218	Pan_paniscus
ENSSMAG00000000320	zfr	100	76.299	ENSPPRG00000008253	ZFR	100	75.934	Panthera_pardus
ENSSMAG00000000320	zfr	100	74.244	ENSPTIG00000010038	ZFR	99	74.540	Panthera_tigris_altaica
ENSSMAG00000000320	zfr	100	76.321	ENSPTRG00000016771	ZFR	100	75.956	Pan_troglodytes
ENSSMAG00000000320	zfr	100	75.092	ENSPANG00000003729	ZFR	100	75.000	Papio_anubis
ENSSMAG00000000320	zfr	100	73.710	ENSPKIG00000007596	ZFR	100	73.905	Paramormyrops_kingsleyae
ENSSMAG00000000320	zfr	94	90.110	ENSPKIG00000016781	ZFR	100	80.018	Paramormyrops_kingsleyae
ENSSMAG00000000320	zfr	55	82.703	ENSPSIG00000005779	ZFR	97	82.162	Pelodiscus_sinensis
ENSSMAG00000000320	zfr	100	68.299	ENSPMGG00000015984	zfr	100	68.421	Periophthalmus_magnuspinnatus
ENSSMAG00000000320	zfr	96	75.236	ENSPEMG00000014573	Zfr	98	73.827	Peromyscus_maniculatus_bairdii
ENSSMAG00000000320	zfr	100	76.755	ENSPCIG00000020906	ZFR	100	76.138	Phascolarctos_cinereus
ENSSMAG00000000320	zfr	99	85.216	ENSPFOG00000005931	zfr	100	84.940	Poecilia_formosa
ENSSMAG00000000320	zfr	99	85.727	ENSPREG00000011947	zfr	100	85.083	Poecilia_reticulata
ENSSMAG00000000320	zfr	97	75.640	ENSPPYG00000015378	ZFR	99	75.836	Pongo_abelii
ENSSMAG00000000320	zfr	100	69.854	ENSPCAG00000007277	ZFR	100	69.217	Procavia_capensis
ENSSMAG00000000320	zfr	95	75.551	ENSPCOG00000000045	ZFR	99	74.113	Propithecus_coquereli
ENSSMAG00000000320	zfr	94	81.928	ENSPVAG00000004780	ZFR	94	81.928	Pteropus_vampyrus
ENSSMAG00000000320	zfr	100	89.395	ENSPNYG00000006239	zfr	100	88.008	Pundamilia_nyererei
ENSSMAG00000000320	zfr	100	84.449	ENSPNAG00000025151	zfr	100	83.303	Pygocentrus_nattereri
ENSSMAG00000000320	zfr	100	76.138	ENSRNOG00000011627	Zfr	100	82.171	Rattus_norvegicus
ENSSMAG00000000320	zfr	100	76.138	ENSRBIG00000041561	ZFR	100	75.774	Rhinopithecus_bieti
ENSSMAG00000000320	zfr	100	76.138	ENSRROG00000044008	ZFR	100	75.774	Rhinopithecus_roxellana
ENSSMAG00000000320	zfr	96	75.951	ENSSBOG00000024150	ZFR	99	76.122	Saimiri_boliviensis_boliviensis
ENSSMAG00000000320	zfr	96	76.638	ENSSHAG00000015478	ZFR	99	76.600	Sarcophilus_harrisii
ENSSMAG00000000320	zfr	100	75.340	ENSSFOG00015017300	ZFR	100	74.932	Scleropages_formosus
ENSSMAG00000000320	zfr	100	91.536	ENSSDUG00000013882	zfr	100	91.076	Seriola_dumerili
ENSSMAG00000000320	zfr	100	91.873	ENSSLDG00000000762	zfr	100	91.179	Seriola_lalandi_dorsalis
ENSSMAG00000000320	zfr	90	84.305	ENSSARG00000006571	ZFR	91	84.305	Sorex_araneus
ENSSMAG00000000320	zfr	96	77.536	ENSSPUG00000016786	ZFR	99	76.879	Sphenodon_punctatus
ENSSMAG00000000320	zfr	100	91.996	ENSSPAG00000019293	zfr	100	91.168	Stegastes_partitus
ENSSMAG00000000320	zfr	100	76.765	ENSSSCG00000027681	ZFR	100	76.373	Sus_scrofa
ENSSMAG00000000320	zfr	99	76.994	ENSTGUG00000001909	ZFR	100	75.849	Taeniopygia_guttata
ENSSMAG00000000320	zfr	100	87.776	ENSTRUG00000016620	zfr	100	86.949	Takifugu_rubripes
ENSSMAG00000000320	zfr	60	80.890	ENSTNIG00000018856	zfr	100	79.445	Tetraodon_nigroviridis
ENSSMAG00000000320	zfr	94	75.532	ENSTBEG00000017687	ZFR	89	72.509	Tupaia_belangeri
ENSSMAG00000000320	zfr	100	72.106	ENSTTRG00000017321	ZFR	100	70.921	Tursiops_truncatus
ENSSMAG00000000320	zfr	79	73.807	ENSUAMG00000000172	-	98	72.385	Ursus_americanus
ENSSMAG00000000320	zfr	79	73.807	ENSUMAG00000013805	-	99	72.385	Ursus_maritimus
ENSSMAG00000000320	zfr	100	74.202	ENSVPAG00000011011	ZFR	100	74.111	Vicugna_pacos
ENSSMAG00000000320	zfr	100	76.299	ENSVVUG00000022171	-	100	75.934	Vulpes_vulpes
ENSSMAG00000000320	zfr	100	71.429	ENSXETG00000015598	zfr	100	71.703	Xenopus_tropicalis
ENSSMAG00000000320	zfr	99	85.399	ENSXCOG00000009361	zfr	100	84.389	Xiphophorus_couchianus
ENSSMAG00000000320	zfr	99	85.491	ENSXMAG00000013356	zfr	100	84.481	Xiphophorus_maculatus