EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000000404 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 14387 bases
Position: chr7:9996069-10010455
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000000635	zf-C2H2	PF00096.26	1.7e-26	1	4
ENSSMAP00000000635	zf-C2H2	PF00096.26	1.7e-26	2	4
ENSSMAP00000000635	zf-C2H2	PF00096.26	1.7e-26	3	4
ENSSMAP00000000635	zf-C2H2	PF00096.26	1.7e-26	4	4
ENSSMAP00000000635	zf-met	PF12874.7	9.1e-14	1	4
ENSSMAP00000000635	zf-met	PF12874.7	9.1e-14	2	4
ENSSMAP00000000635	zf-met	PF12874.7	9.1e-14	3	4
ENSSMAP00000000635	zf-met	PF12874.7	9.1e-14	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000000654	-	1161	-	ENSSMAP00000000635	386 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000000404's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000000404's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000000404	-	89	36.788	ENSSMAG00000013291	-	91	35.897
ENSSMAG00000000404	-	93	31.776	ENSSMAG00000008907	zbtb41	61	31.776
ENSSMAG00000000404	-	67	36.257	ENSSMAG00000014844	-	74	36.869
ENSSMAG00000000404	-	52	37.278	ENSSMAG00000013828	-	60	37.278
ENSSMAG00000000404	-	86	43.678	ENSSMAG00000006197	-	96	40.777
ENSSMAG00000000404	-	84	36.792	ENSSMAG00000009609	-	92	34.862
ENSSMAG00000000404	-	92	37.037	ENSSMAG00000015347	-	80	37.755
ENSSMAG00000000404	-	85	38.788	ENSSMAG00000009685	-	90	37.245
ENSSMAG00000000404	-	85	34.118	ENSSMAG00000004252	-	92	30.189
ENSSMAG00000000404	-	70	31.532	ENSSMAG00000012378	znf646	59	31.532
ENSSMAG00000000404	-	93	38.235	ENSSMAG00000005081	-	76	38.235
ENSSMAG00000000404	-	85	30.597	ENSSMAG00000014864	-	82	35.366
ENSSMAG00000000404	-	86	32.500	ENSSMAG00000007396	-	79	32.515
ENSSMAG00000000404	-	83	30.864	ENSSMAG00000002391	ZNF319	85	34.043
ENSSMAG00000000404	-	51	33.526	ENSSMAG00000019949	-	82	41.270
ENSSMAG00000000404	-	99	36.719	ENSSMAG00000005076	-	93	38.824
ENSSMAG00000000404	-	89	36.522	ENSSMAG00000013663	-	93	41.414
ENSSMAG00000000404	-	95	37.615	ENSSMAG00000007561	znf236	65	37.168
ENSSMAG00000000404	-	86	36.364	ENSSMAG00000009115	-	90	38.182
ENSSMAG00000000404	-	62	34.066	ENSSMAG00000021271	-	64	32.692
ENSSMAG00000000404	-	66	37.500	ENSSMAG00000006155	-	59	36.765
ENSSMAG00000000404	-	67	33.171	ENSSMAG00000003594	-	80	39.024
ENSSMAG00000000404	-	56	42.857	ENSSMAG00000015356	-	89	42.857
ENSSMAG00000000404	-	83	30.864	ENSSMAG00000015849	znf319b	75	31.937
ENSSMAG00000000404	-	91	36.788	ENSSMAG00000021251	-	95	39.535
ENSSMAG00000000404	-	87	32.489	ENSSMAG00000013676	-	81	30.952
ENSSMAG00000000404	-	51	46.429	ENSSMAG00000019980	-	62	46.429
ENSSMAG00000000404	-	85	36.111	ENSSMAG00000014597	-	68	36.111
ENSSMAG00000000404	-	91	35.385	ENSSMAG00000015041	si:dkey-7i4.5	87	34.921
ENSSMAG00000000404	-	85	35.329	ENSSMAG00000008308	-	63	35.329
ENSSMAG00000000404	-	91	32.584	ENSSMAG00000015282	-	88	32.584
ENSSMAG00000000404	-	65	33.854	ENSSMAG00000018844	prdm5	80	33.854

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000000404	-	51	34.228	ENSACIG00000017166	-	58	34.228	Amphilophus_citrinellus
ENSSMAG00000000404	-	82	72.727	ENSAPEG00000007889	-	92	72.727	Amphiprion_percula
ENSSMAG00000000404	-	88	63.750	ENSAPEG00000007910	-	50	65.278	Amphiprion_percula
ENSSMAG00000000404	-	59	31.193	ENSAPEG00000019755	-	99	31.193	Amphiprion_percula
ENSSMAG00000000404	-	85	68.182	ENSAMXG00000032845	-	66	60.784	Astyanax_mexicanus
ENSSMAG00000000404	-	69	32.530	ENSCING00000004861	zf(c2h2)-12	81	32.530	Ciona_intestinalis
ENSSMAG00000000404	-	53	32.243	ENSCING00000000529	zf(btb/c2h2)	55	32.243	Ciona_intestinalis
ENSSMAG00000000404	-	50	35.294	ENSCING00000005713	-	69	35.294	Ciona_intestinalis
ENSSMAG00000000404	-	88	37.719	ENSCSAVG00000009574	-	99	37.719	Ciona_savignyi
ENSSMAG00000000404	-	69	30.159	ENSCSAVG00000005896	-	77	30.159	Ciona_savignyi
ENSSMAG00000000404	-	65	31.694	ENSCSAVG00000006729	-	79	30.653	Ciona_savignyi
ENSSMAG00000000404	-	92	42.424	ENSCSEG00000005491	-	87	34.783	Cynoglossus_semilaevis
ENSSMAG00000000404	-	96	35.556	ENSCVAG00000002295	-	85	38.194	Cyprinodon_variegatus
ENSSMAG00000000404	-	92	35.632	ENSCVAG00000016098	-	92	35.632	Cyprinodon_variegatus
ENSSMAG00000000404	-	50	31.387	FBgn0028895	CG17328	53	31.387	Drosophila_melanogaster
ENSSMAG00000000404	-	85	49.206	ENSEBUG00000000735	-	98	49.206	Eptatretus_burgeri
ENSSMAG00000000404	-	85	35.938	ENSEBUG00000004841	-	81	37.143	Eptatretus_burgeri
ENSSMAG00000000404	-	85	40.323	ENSEBUG00000008392	-	75	40.323	Eptatretus_burgeri
ENSSMAG00000000404	-	91	41.935	ENSEBUG00000015522	-	71	41.935	Eptatretus_burgeri
ENSSMAG00000000404	-	53	34.503	ENSELUG00000020794	-	52	34.503	Esox_lucius
ENSSMAG00000000404	-	92	36.810	ENSFHEG00000003596	-	69	36.810	Fundulus_heteroclitus
ENSSMAG00000000404	-	72	32.804	ENSFHEG00000020889	-	71	34.536	Fundulus_heteroclitus
ENSSMAG00000000404	-	86	36.810	ENSFHEG00000012990	-	91	36.810	Fundulus_heteroclitus
ENSSMAG00000000404	-	85	40.000	ENSFHEG00000013644	-	76	40.299	Fundulus_heteroclitus
ENSSMAG00000000404	-	61	35.882	ENSHCOG00000017437	-	76	32.404	Hippocampus_comes
ENSSMAG00000000404	-	93	37.383	ENSHCOG00000014881	-	70	37.383	Hippocampus_comes
ENSSMAG00000000404	-	65	48.691	ENSIPUG00000013526	-	71	48.691	Ictalurus_punctatus
ENSSMAG00000000404	-	53	30.622	ENSKMAG00000007658	-	79	32.020	Kryptolebias_marmoratus
ENSSMAG00000000404	-	95	51.316	ENSKMAG00000011202	-	55	56.061	Kryptolebias_marmoratus
ENSSMAG00000000404	-	90	65.823	ENSMALG00000017354	-	51	65.714	Monopterus_albus
ENSSMAG00000000404	-	94	30.058	ENSONIG00000003224	-	93	30.058	Oreochromis_niloticus
ENSSMAG00000000404	-	58	91.176	ENSONIG00000009894	-	100	91.176	Oreochromis_niloticus
ENSSMAG00000000404	-	96	35.878	ENSONIG00000007812	-	100	37.226	Oreochromis_niloticus
ENSSMAG00000000404	-	50	34.848	ENSONIG00000003471	-	97	34.848	Oreochromis_niloticus
ENSSMAG00000000404	-	89	36.667	ENSONIG00000016416	-	98	37.681	Oreochromis_niloticus
ENSSMAG00000000404	-	87	32.544	ENSOMEG00000017673	-	69	32.544	Oryzias_melastigma
ENSSMAG00000000404	-	50	32.624	ENSPMGG00000000489	-	73	33.333	Periophthalmus_magnuspinnatus
ENSSMAG00000000404	-	86	47.143	ENSPMGG00000000458	-	87	47.727	Periophthalmus_magnuspinnatus
ENSSMAG00000000404	-	86	43.038	ENSPMGG00000010664	-	93	43.038	Periophthalmus_magnuspinnatus
ENSSMAG00000000404	-	70	30.625	ENSPMGG00000010563	-	80	30.625	Periophthalmus_magnuspinnatus
ENSSMAG00000000404	-	90	39.130	ENSPMGG00000022524	-	94	39.130	Periophthalmus_magnuspinnatus
ENSSMAG00000000404	-	64	53.448	ENSPMGG00000019842	-	81	53.448	Periophthalmus_magnuspinnatus
ENSSMAG00000000404	-	85	40.217	ENSPMGG00000000243	-	75	40.217	Periophthalmus_magnuspinnatus
ENSSMAG00000000404	-	68	38.318	ENSPMGG00000000218	-	61	38.323	Periophthalmus_magnuspinnatus
ENSSMAG00000000404	-	87	35.088	ENSPMAG00000007983	-	98	35.088	Petromyzon_marinus
ENSSMAG00000000404	-	51	34.737	ENSPFOG00000020691	-	86	34.975	Poecilia_formosa
ENSSMAG00000000404	-	91	41.045	ENSPFOG00000002879	-	99	41.045	Poecilia_formosa
ENSSMAG00000000404	-	85	36.082	ENSPLAG00000006174	-	76	36.082	Poecilia_latipinna
ENSSMAG00000000404	-	61	36.232	ENSPLAG00000011254	-	73	36.232	Poecilia_latipinna
ENSSMAG00000000404	-	87	54.455	ENSPMEG00000021927	-	66	86.842	Poecilia_mexicana
ENSSMAG00000000404	-	87	32.386	ENSPREG00000016204	-	65	32.386	Poecilia_reticulata
ENSSMAG00000000404	-	85	32.955	ENSPNAG00000025211	-	59	32.955	Pygocentrus_nattereri
ENSSMAG00000000404	-	96	38.037	ENSSDUG00000000946	-	94	33.333	Seriola_dumerili
ENSSMAG00000000404	-	95	72.857	ENSSLDG00000012635	-	51	72.857	Seriola_lalandi_dorsalis
ENSSMAG00000000404	-	96	61.765	ENSSPAG00000009405	-	73	61.765	Stegastes_partitus
ENSSMAG00000000404	-	84	31.618	ENSTNIG00000008154	-	96	31.618	Tetraodon_nigroviridis