EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000000471 (Gene tree)
Gene ID: -
Gene Symbol: cpsf6
Alias: wu:fa22f12|zgc:85819
Full Name: cleavage and polyadenylation specific factor 6
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 6720 bases
Position: chr2:17268032-17274751
Accession: ZDB-GENE-030131-5277
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000000754	RRM_1	PF00076.22	5.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000000773	-	1863	-	ENSSMAP00000000754	582 (aa)	-	A0A2U9B2R5

Gene Model

Click here to download ENSSMAG00000000471's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000000471's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000000471	cpsf6	92	83.525	ENSG00000111605	CPSF6	88	80.851	Homo_sapiens
ENSSMAG00000000471	cpsf6	64	49.223	ENSG00000149532	CPSF7	100	49.333	Homo_sapiens
ENSSMAG00000000471	cpsf6	100	90.785	ENSAOCG00000017865	cpsf6	100	90.785	Amphiprion_ocellaris
ENSSMAG00000000471	cpsf6	60	45.143	ENSANAG00000024635	CPSF7	69	45.355	Aotus_nancymaae
ENSSMAG00000000471	cpsf6	95	89.189	ENSACLG00000026325	cpsf6	55	94.375	Astatotilapia_calliptera
ENSSMAG00000000471	cpsf6	59	91.667	ENSAMXG00000016745	CPSF6	75	90.361	Astyanax_mexicanus
ENSSMAG00000000471	cpsf6	61	49.741	ENSBTAG00000015263	CPSF7	71	50.282	Bos_taurus
ENSSMAG00000000471	cpsf6	64	49.223	ENSCJAG00000019282	CPSF7	75	58.779	Callithrix_jacchus
ENSSMAG00000000471	cpsf6	61	49.741	ENSCAFG00000016152	CPSF7	71	50.847	Canis_familiaris
ENSSMAG00000000471	cpsf6	61	49.741	ENSCAFG00020012753	CPSF7	71	50.847	Canis_lupus_dingo
ENSSMAG00000000471	cpsf6	61	49.741	ENSCHIG00000014655	CPSF7	71	50.282	Capra_hircus
ENSSMAG00000000471	cpsf6	73	84.170	ENSTSYG00000008591	CPSF6	73	82.822	Carlito_syrichta
ENSSMAG00000000471	cpsf6	61	49.741	ENSTSYG00000010138	-	71	50.847	Carlito_syrichta
ENSSMAG00000000471	cpsf6	52	58.741	ENSCAPG00000006384	CPSF7	70	50.847	Cavia_aperea
ENSSMAG00000000471	cpsf6	54	58.741	ENSCPOG00000009980	CPSF7	71	50.847	Cavia_porcellus
ENSSMAG00000000471	cpsf6	61	49.223	ENSCCAG00000032367	CPSF7	71	50.282	Cebus_capucinus
ENSSMAG00000000471	cpsf6	64	49.223	ENSCATG00000042801	CPSF7	73	50.282	Cercocebus_atys
ENSSMAG00000000471	cpsf6	54	58.741	ENSCLAG00000003174	CPSF7	71	50.282	Chinchilla_lanigera
ENSSMAG00000000471	cpsf6	64	49.223	ENSCSAG00000006414	CPSF7	73	50.282	Chlorocebus_sabaeus
ENSSMAG00000000471	cpsf6	61	50.259	ENSCGRG00001020382	Cpsf7	71	50.829	Cricetulus_griseus_chok1gshd
ENSSMAG00000000471	cpsf6	64	50.259	ENSCGRG00000017954	Cpsf7	73	50.829	Cricetulus_griseus_crigri
ENSSMAG00000000471	cpsf6	95	94.595	ENSCSEG00000008967	cpsf6	55	96.250	Cynoglossus_semilaevis
ENSSMAG00000000471	cpsf6	74	38.605	ENSCVAG00000007392	CPSF7	68	42.949	Cyprinodon_variegatus
ENSSMAG00000000471	cpsf6	95	89.369	ENSCVAG00000014857	cpsf6	95	85.766	Cyprinodon_variegatus
ENSSMAG00000000471	cpsf6	61	49.741	ENSDNOG00000018517	CPSF7	75	59.542	Dasypus_novemcinctus
ENSSMAG00000000471	cpsf6	61	50.259	ENSETEG00000003765	CPSF7	62	62.500	Echinops_telfairi
ENSSMAG00000000471	cpsf6	65	82.028	ENSETEG00000002097	CPSF6	74	83.978	Echinops_telfairi
ENSSMAG00000000471	cpsf6	84	60.265	ENSEBUG00000003540	cpsf6	67	78.571	Eptatretus_burgeri
ENSSMAG00000000471	cpsf6	55	58.904	ENSEASG00005008196	CPSF7	71	50.847	Equus_asinus_asinus
ENSSMAG00000000471	cpsf6	61	49.741	ENSFCAG00000013677	CPSF7	74	63.333	Felis_catus
ENSSMAG00000000471	cpsf6	67	48.319	ENSFALG00000011927	CPSF7	76	56.069	Ficedula_albicollis
ENSSMAG00000000471	cpsf6	61	50.259	ENSFDAG00000003919	CPSF7	71	50.847	Fukomys_damarensis
ENSSMAG00000000471	cpsf6	95	84.220	ENSFHEG00000019693	cpsf6	52	89.720	Fundulus_heteroclitus
ENSSMAG00000000471	cpsf6	55	99.333	ENSGMOG00000012951	cpsf6	59	99.333	Gadus_morhua
ENSSMAG00000000471	cpsf6	59	49.721	ENSGALG00000040962	CPSF7	63	51.412	Gallus_gallus
ENSSMAG00000000471	cpsf6	95	89.369	ENSHBUG00000005998	cpsf6	55	94.375	Haplochromis_burtoni
ENSSMAG00000000471	cpsf6	57	58.741	ENSHGLG00000019090	-	73	50.847	Heterocephalus_glaber_female
ENSSMAG00000000471	cpsf6	57	58.741	ENSHGLG00100013933	-	73	50.847	Heterocephalus_glaber_male
ENSSMAG00000000471	cpsf6	95	86.559	ENSHCOG00000014555	cpsf6	95	84.409	Hippocampus_comes
ENSSMAG00000000471	cpsf6	61	49.741	ENSSTOG00000007708	CPSF7	71	50.276	Ictidomys_tridecemlineatus
ENSSMAG00000000471	cpsf6	64	49.741	ENSJJAG00000019390	Cpsf7	73	50.847	Jaculus_jaculus
ENSSMAG00000000471	cpsf6	100	95.608	ENSLBEG00000015762	cpsf6	100	95.608	Labrus_bergylta
ENSSMAG00000000471	cpsf6	53	40.278	ENSLBEG00000000947	CPSF7	60	49.550	Labrus_bergylta
ENSSMAG00000000471	cpsf6	59	46.203	ENSLACG00000005542	CPSF7	70	45.570	Latimeria_chalumnae
ENSSMAG00000000471	cpsf6	64	84.393	ENSLAFG00000030413	CPSF6	74	84.393	Loxodonta_africana
ENSSMAG00000000471	cpsf6	61	50.259	ENSLAFG00000032084	CPSF7	71	50.847	Loxodonta_africana
ENSSMAG00000000471	cpsf6	61	49.223	ENSMFAG00000001401	CPSF7	71	50.282	Macaca_fascicularis
ENSSMAG00000000471	cpsf6	64	49.223	ENSMMUG00000015280	CPSF7	73	50.282	Macaca_mulatta
ENSSMAG00000000471	cpsf6	64	49.223	ENSMNEG00000029585	CPSF7	73	50.282	Macaca_nemestrina
ENSSMAG00000000471	cpsf6	61	49.223	ENSMLEG00000031269	CPSF7	70	50.282	Mandrillus_leucophaeus
ENSSMAG00000000471	cpsf6	100	96.068	ENSMAMG00000010385	cpsf6	100	96.068	Mastacembelus_armatus
ENSSMAG00000000471	cpsf6	95	89.369	ENSMZEG00005007975	cpsf6	55	94.375	Maylandia_zebra
ENSSMAG00000000471	cpsf6	61	49.741	ENSMAUG00000013020	Cpsf7	71	50.276	Mesocricetus_auratus
ENSSMAG00000000471	cpsf6	61	49.741	ENSMICG00000013788	CPSF7	71	50.847	Microcebus_murinus
ENSSMAG00000000471	cpsf6	61	49.741	ENSMOCG00000000072	Cpsf7	71	50.276	Microtus_ochrogaster
ENSSMAG00000000471	cpsf6	61	51.531	ENSMODG00000020364	CPSF7	63	60.606	Monodelphis_domestica
ENSSMAG00000000471	cpsf6	77	97.321	ENSMALG00000014908	cpsf6	89	97.321	Monopterus_albus
ENSSMAG00000000471	cpsf6	61	49.741	MGP_CAROLIEiJ_G0022690	Cpsf7	71	50.276	Mus_caroli
ENSSMAG00000000471	cpsf6	61	49.741	ENSMUSG00000034820	Cpsf7	71	50.276	Mus_musculus
ENSSMAG00000000471	cpsf6	61	49.741	MGP_PahariEiJ_G0014184	Cpsf7	71	50.276	Mus_pahari
ENSSMAG00000000471	cpsf6	61	49.741	MGP_SPRETEiJ_G0023604	Cpsf7	71	50.276	Mus_spretus
ENSSMAG00000000471	cpsf6	53	58.219	ENSMPUG00000014163	CPSF7	68	49.718	Mustela_putorius_furo
ENSSMAG00000000471	cpsf6	61	78.488	ENSMLUG00000023960	-	71	77.273	Myotis_lucifugus
ENSSMAG00000000471	cpsf6	63	86.232	ENSMLUG00000028728	-	79	84.722	Myotis_lucifugus
ENSSMAG00000000471	cpsf6	64	49.741	ENSMLUG00000013278	CPSF7	73	50.847	Myotis_lucifugus
ENSSMAG00000000471	cpsf6	61	51.295	ENSNGAG00000005031	Cpsf7	71	50.847	Nannospalax_galili
ENSSMAG00000000471	cpsf6	61	49.223	ENSNLEG00000002529	CPSF7	65	50.282	Nomascus_leucogenys
ENSSMAG00000000471	cpsf6	61	53.368	ENSMEUG00000002261	CPSF7	71	51.381	Notamacropus_eugenii
ENSSMAG00000000471	cpsf6	61	48.045	ENSODEG00000002610	CPSF7	71	50.556	Octodon_degus
ENSSMAG00000000471	cpsf6	62	88.554	ENSODEG00000004418	-	77	87.952	Octodon_degus
ENSSMAG00000000471	cpsf6	95	88.108	ENSONIG00000011702	cpsf6	55	90.938	Oreochromis_niloticus
ENSSMAG00000000471	cpsf6	62	48.925	ENSOCUG00000024726	CPSF7	71	49.724	Oryctolagus_cuniculus
ENSSMAG00000000471	cpsf6	62	33.766	ENSORLG00000006495	CPSF7	58	48.649	Oryzias_latipes
ENSSMAG00000000471	cpsf6	64	34.934	ENSORLG00020012657	CPSF7	58	48.649	Oryzias_latipes_hni
ENSSMAG00000000471	cpsf6	62	33.766	ENSORLG00015011091	CPSF7	58	49.550	Oryzias_latipes_hsok
ENSSMAG00000000471	cpsf6	61	49.741	ENSOGAG00000027958	CPSF7	66	50.847	Otolemur_garnettii
ENSSMAG00000000471	cpsf6	96	37.608	ENSOARG00000012937	CPSF7	64	50.282	Ovis_aries
ENSSMAG00000000471	cpsf6	61	49.223	ENSPPAG00000028232	CPSF7	69	50.282	Pan_paniscus
ENSSMAG00000000471	cpsf6	61	49.741	ENSPPRG00000008538	CPSF7	71	50.847	Panthera_pardus
ENSSMAG00000000471	cpsf6	61	49.741	ENSPTIG00000021699	CPSF7	71	50.847	Panthera_tigris_altaica
ENSSMAG00000000471	cpsf6	61	49.223	ENSPTRG00000003742	CPSF7	71	50.282	Pan_troglodytes
ENSSMAG00000000471	cpsf6	75	93.443	ENSPANG00000011641	CPSF6	64	84.530	Papio_anubis
ENSSMAG00000000471	cpsf6	61	49.223	ENSPANG00000006037	CPSF7	70	50.282	Papio_anubis
ENSSMAG00000000471	cpsf6	62	42.857	ENSPKIG00000018054	CPSF7	73	48.387	Paramormyrops_kingsleyae
ENSSMAG00000000471	cpsf6	64	49.741	ENSPEMG00000012648	Cpsf7	73	50.276	Peromyscus_maniculatus_bairdii
ENSSMAG00000000471	cpsf6	61	51.531	ENSPCIG00000002551	CPSF7	73	60.606	Phascolarctos_cinereus
ENSSMAG00000000471	cpsf6	77	94.828	ENSPLAG00000005715	cpsf6	95	87.568	Poecilia_latipinna
ENSSMAG00000000471	cpsf6	95	84.838	ENSPMEG00000001353	cpsf6	95	87.568	Poecilia_mexicana
ENSSMAG00000000471	cpsf6	55	91.022	ENSPREG00000004417	cpsf6	95	87.568	Poecilia_reticulata
ENSSMAG00000000471	cpsf6	61	49.223	ENSPPYG00000003188	CPSF7	71	50.282	Pongo_abelii
ENSSMAG00000000471	cpsf6	61	49.741	ENSPCOG00000011976	CPSF7	71	50.847	Propithecus_coquereli
ENSSMAG00000000471	cpsf6	61	49.741	ENSPVAG00000010675	CPSF7	71	50.847	Pteropus_vampyrus
ENSSMAG00000000471	cpsf6	95	89.369	ENSPNYG00000020315	cpsf6	55	94.062	Pundamilia_nyererei
ENSSMAG00000000471	cpsf6	56	46.104	ENSPNAG00000015073	CPSF7	69	46.951	Pygocentrus_nattereri
ENSSMAG00000000471	cpsf6	64	49.741	ENSRNOG00000020668	Cpsf7	73	50.276	Rattus_norvegicus
ENSSMAG00000000471	cpsf6	64	49.223	ENSRBIG00000031429	CPSF7	77	58.779	Rhinopithecus_bieti
ENSSMAG00000000471	cpsf6	61	49.223	ENSRROG00000045009	CPSF7	71	50.282	Rhinopithecus_roxellana
ENSSMAG00000000471	cpsf6	61	49.223	ENSSBOG00000018431	CPSF7	71	50.282	Saimiri_boliviensis_boliviensis
ENSSMAG00000000471	cpsf6	74	84.231	ENSSBOG00000010652	CPSF6	51	83.071	Saimiri_boliviensis_boliviensis
ENSSMAG00000000471	cpsf6	59	50.777	ENSSHAG00000011964	CPSF7	68	51.381	Sarcophilus_harrisii
ENSSMAG00000000471	cpsf6	63	41.379	ENSSFOG00015010288	cpsf7	68	47.143	Scleropages_formosus
ENSSMAG00000000471	cpsf6	100	97.607	ENSSDUG00000005024	cpsf6	100	97.607	Seriola_dumerili
ENSSMAG00000000471	cpsf6	100	97.607	ENSSLDG00000009042	cpsf6	100	97.607	Seriola_lalandi_dorsalis
ENSSMAG00000000471	cpsf6	80	83.858	ENSSARG00000006743	CPSF6	74	86.166	Sorex_araneus
ENSSMAG00000000471	cpsf6	61	50.256	ENSSPUG00000019344	CPSF7	73	52.841	Sphenodon_punctatus
ENSSMAG00000000471	cpsf6	100	96.587	ENSSPAG00000013906	cpsf6	100	96.587	Stegastes_partitus
ENSSMAG00000000471	cpsf6	61	49.741	ENSSSCG00000013083	CPSF7	75	59.542	Sus_scrofa
ENSSMAG00000000471	cpsf6	59	52.809	ENSTGUG00000006513	CPSF7	71	53.488	Taeniopygia_guttata
ENSSMAG00000000471	cpsf6	59	49.223	ENSTTRG00000011085	CPSF7	70	50.847	Tursiops_truncatus
ENSSMAG00000000471	cpsf6	61	49.741	ENSUAMG00000017809	CPSF7	71	50.847	Ursus_americanus
ENSSMAG00000000471	cpsf6	56	88.485	ENSUMAG00000020779	CPSF6	64	89.697	Ursus_maritimus
ENSSMAG00000000471	cpsf6	64	49.741	ENSUMAG00000011825	CPSF7	73	50.847	Ursus_maritimus
ENSSMAG00000000471	cpsf6	61	49.741	ENSVVUG00000004939	CPSF7	75	59.542	Vulpes_vulpes
ENSSMAG00000000471	cpsf6	97	37.436	ENSXETG00000006715	cpsf7	65	47.753	Xenopus_tropicalis
ENSSMAG00000000471	cpsf6	55	91.022	ENSXMAG00000003459	cpsf6	95	87.568	Xiphophorus_maculatus