EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000000609 (Gene tree)
Gene ID: -
Gene Symbol: thumpd3
Alias: cb255|sb:cb255|zgc:163086
Full Name: THUMP domain containing 3
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 11872 bases
Position: chr6:13294712-13306583
Accession: ZDB-GENE-030131-9745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000000974	THUMP	PF02926.17	4.3e-10	1	1
ENSSMAP00000000979	THUMP	PF02926.17	4.7e-10	1	1
ENSSMAP00000000974	UPF0020	PF01170.18	6.2e-40	1	1
ENSSMAP00000000979	UPF0020	PF01170.18	7e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000001001	-	1632	-	ENSSMAP00000000979	498 (aa)	-	-
ENSSMAT00000000996	-	1434	-	ENSSMAP00000000974	477 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000000609's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000000609's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000000609	thumpd3	94	57.265	ENSG00000134077	THUMPD3	92	58.422	Homo_sapiens
ENSSMAG00000000609	thumpd3	97	84.298	ENSAPOG00000015836	thumpd3	99	84.298	Acanthochromis_polyacanthus
ENSSMAG00000000609	thumpd3	92	60.793	ENSAMEG00000011321	THUMPD3	90	61.454	Ailuropoda_melanoleuca
ENSSMAG00000000609	thumpd3	97	85.560	ENSACIG00000020096	thumpd3	99	82.863	Amphilophus_citrinellus
ENSSMAG00000000609	thumpd3	98	84.829	ENSAOCG00000004399	thumpd3	100	82.966	Amphiprion_ocellaris
ENSSMAG00000000609	thumpd3	97	85.376	ENSAPEG00000016740	thumpd3	100	82.966	Amphiprion_percula
ENSSMAG00000000609	thumpd3	97	85.376	ENSATEG00000005345	thumpd3	99	82.520	Anabas_testudineus
ENSSMAG00000000609	thumpd3	79	63.038	ENSAPLG00000003598	THUMPD3	99	63.010	Anas_platyrhynchos
ENSSMAG00000000609	thumpd3	91	60.888	ENSACAG00000014974	THUMPD3	91	60.593	Anolis_carolinensis
ENSSMAG00000000609	thumpd3	93	57.516	ENSANAG00000002365	THUMPD3	92	57.849	Aotus_nancymaae
ENSSMAG00000000609	thumpd3	86	59.709	ENSACLG00000013504	-	89	58.178	Astatotilapia_calliptera
ENSSMAG00000000609	thumpd3	97	85.806	ENSACLG00000023333	thumpd3	99	83.773	Astatotilapia_calliptera
ENSSMAG00000000609	thumpd3	97	73.291	ENSAMXG00000015683	thumpd3	98	73.291	Astyanax_mexicanus
ENSSMAG00000000609	thumpd3	81	30.348	ENSBTAG00000004722	THUMPD2	78	30.049	Bos_taurus
ENSSMAG00000000609	thumpd3	93	60.776	ENSBTAG00000003112	THUMPD3	91	61.207	Bos_taurus
ENSSMAG00000000609	thumpd3	88	34.824	WBGene00010846	M04B2.2	96	35.529	Caenorhabditis_elegans
ENSSMAG00000000609	thumpd3	93	57.516	ENSCJAG00000015949	THUMPD3	91	58.747	Callithrix_jacchus
ENSSMAG00000000609	thumpd3	76	58.442	ENSCAFG00000008060	-	93	59.221	Canis_familiaris
ENSSMAG00000000609	thumpd3	92	60.262	ENSCAFG00000005499	THUMPD3	90	60.917	Canis_familiaris
ENSSMAG00000000609	thumpd3	92	60.262	ENSCAFG00020008895	-	90	60.917	Canis_lupus_dingo
ENSSMAG00000000609	thumpd3	82	59.512	ENSCAFG00020025887	-	94	60.244	Canis_lupus_dingo
ENSSMAG00000000609	thumpd3	93	60.907	ENSCHIG00000024037	THUMPD3	90	61.572	Capra_hircus
ENSSMAG00000000609	thumpd3	94	56.897	ENSTSYG00000000159	THUMPD3	92	57.783	Carlito_syrichta
ENSSMAG00000000609	thumpd3	87	40.380	ENSCAPG00000017486	THUMPD3	83	41.093	Cavia_aperea
ENSSMAG00000000609	thumpd3	93	58.225	ENSCPOG00000033287	THUMPD3	95	56.936	Cavia_porcellus
ENSSMAG00000000609	thumpd3	93	57.516	ENSCCAG00000027067	-	92	58.209	Cebus_capucinus
ENSSMAG00000000609	thumpd3	95	50.968	ENSCCAG00000021429	-	96	51.059	Cebus_capucinus
ENSSMAG00000000609	thumpd3	93	57.667	ENSCATG00000040999	THUMPD3	91	58.531	Cercocebus_atys
ENSSMAG00000000609	thumpd3	93	59.091	ENSCLAG00000000690	THUMPD3	91	59.524	Chinchilla_lanigera
ENSSMAG00000000609	thumpd3	93	57.883	ENSCSAG00000010753	THUMPD3	91	58.747	Chlorocebus_sabaeus
ENSSMAG00000000609	thumpd3	78	49.416	ENSCHOG00000012851	THUMPD3	74	49.027	Choloepus_hoffmanni
ENSSMAG00000000609	thumpd3	94	58.800	ENSCPBG00000014771	THUMPD3	98	58.717	Chrysemys_picta_bellii
ENSSMAG00000000609	thumpd3	92	41.648	ENSCSAVG00000008668	-	97	40.275	Ciona_savignyi
ENSSMAG00000000609	thumpd3	93	57.667	ENSCANG00000031901	THUMPD3	91	58.531	Colobus_angolensis_palliatus
ENSSMAG00000000609	thumpd3	94	58.405	ENSCGRG00001024117	Thumpd3	92	59.483	Cricetulus_griseus_chok1gshd
ENSSMAG00000000609	thumpd3	94	58.405	ENSCGRG00000018116	Thumpd3	92	59.483	Cricetulus_griseus_crigri
ENSSMAG00000000609	thumpd3	97	82.151	ENSCSEG00000002546	thumpd3	96	82.151	Cynoglossus_semilaevis
ENSSMAG00000000609	thumpd3	97	80.258	ENSCVAG00000001019	thumpd3	98	77.485	Cyprinodon_variegatus
ENSSMAG00000000609	thumpd3	97	68.008	ENSDARG00000059634	thumpd3	99	68.008	Danio_rerio
ENSSMAG00000000609	thumpd3	92	60.394	ENSDNOG00000047668	THUMPD3	88	60.917	Dasypus_novemcinctus
ENSSMAG00000000609	thumpd3	91	59.300	ENSDORG00000003257	Thumpd3	93	58.723	Dipodomys_ordii
ENSSMAG00000000609	thumpd3	60	55.229	ENSETEG00000020239	-	60	56.209	Echinops_telfairi
ENSSMAG00000000609	thumpd3	90	51.345	ENSEBUG00000004221	thumpd3	97	51.345	Eptatretus_burgeri
ENSSMAG00000000609	thumpd3	92	57.987	ENSEASG00005013327	THUMPD3	90	58.590	Equus_asinus_asinus
ENSSMAG00000000609	thumpd3	91	60.398	ENSECAG00000002016	THUMPD3	90	60.573	Equus_caballus
ENSSMAG00000000609	thumpd3	93	53.813	ENSEEUG00000014696	THUMPD3	95	52.772	Erinaceus_europaeus
ENSSMAG00000000609	thumpd3	94	76.276	ENSELUG00000018246	thumpd3	68	88.043	Esox_lucius
ENSSMAG00000000609	thumpd3	92	60.486	ENSFCAG00000006171	THUMPD3	90	61.148	Felis_catus
ENSSMAG00000000609	thumpd3	85	57.309	ENSFALG00000013631	THUMPD3	93	57.658	Ficedula_albicollis
ENSSMAG00000000609	thumpd3	92	59.519	ENSFDAG00000014825	THUMPD3	90	60.394	Fukomys_damarensis
ENSSMAG00000000609	thumpd3	97	82.906	ENSFHEG00000006006	thumpd3	99	80.160	Fundulus_heteroclitus
ENSSMAG00000000609	thumpd3	97	68.936	ENSGMOG00000007923	thumpd3	98	67.909	Gadus_morhua
ENSSMAG00000000609	thumpd3	90	59.013	ENSGALG00000044813	THUMPD3	96	58.700	Gallus_gallus
ENSSMAG00000000609	thumpd3	97	82.869	ENSGAFG00000021645	thumpd3	99	80.561	Gambusia_affinis
ENSSMAG00000000609	thumpd3	99	81.316	ENSGACG00000000930	thumpd3	100	81.316	Gasterosteus_aculeatus
ENSSMAG00000000609	thumpd3	91	61.123	ENSGAGG00000022750	THUMPD3	94	60.460	Gopherus_agassizii
ENSSMAG00000000609	thumpd3	94	56.624	ENSGGOG00000000604	THUMPD3	92	58.244	Gorilla_gorilla
ENSSMAG00000000609	thumpd3	97	85.591	ENSHBUG00000013405	thumpd3	99	83.570	Haplochromis_burtoni
ENSSMAG00000000609	thumpd3	93	59.002	ENSHGLG00000016200	THUMPD3	91	59.653	Heterocephalus_glaber_female
ENSSMAG00000000609	thumpd3	93	58.874	ENSHGLG00100017321	-	91	59.524	Heterocephalus_glaber_male
ENSSMAG00000000609	thumpd3	90	52.339	ENSHGLG00100000505	-	92	53.007	Heterocephalus_glaber_male
ENSSMAG00000000609	thumpd3	97	80.346	ENSHCOG00000004871	thumpd3	99	79.114	Hippocampus_comes
ENSSMAG00000000609	thumpd3	95	71.868	ENSIPUG00000019415	THUMPD3	94	71.868	Ictalurus_punctatus
ENSSMAG00000000609	thumpd3	92	59.912	ENSSTOG00000003973	THUMPD3	94	58.526	Ictidomys_tridecemlineatus
ENSSMAG00000000609	thumpd3	96	53.361	ENSJJAG00000017751	Thumpd3	94	53.498	Jaculus_jaculus
ENSSMAG00000000609	thumpd3	100	79.960	ENSKMAG00000021025	thumpd3	94	79.960	Kryptolebias_marmoratus
ENSSMAG00000000609	thumpd3	97	84.698	ENSLBEG00000012252	thumpd3	99	82.056	Labrus_bergylta
ENSSMAG00000000609	thumpd3	92	61.039	ENSLACG00000018604	THUMPD3	93	57.916	Latimeria_chalumnae
ENSSMAG00000000609	thumpd3	96	61.980	ENSLOCG00000009800	thumpd3	94	65.812	Lepisosteus_oculatus
ENSSMAG00000000609	thumpd3	93	60.000	ENSLAFG00000005103	THUMPD3	91	60.259	Loxodonta_africana
ENSSMAG00000000609	thumpd3	92	58.297	ENSMFAG00000044884	THUMPD3	90	59.170	Macaca_fascicularis
ENSSMAG00000000609	thumpd3	92	58.297	ENSMMUG00000017307	THUMPD3	90	59.170	Macaca_mulatta
ENSSMAG00000000609	thumpd3	92	58.297	ENSMNEG00000030529	THUMPD3	90	59.170	Macaca_nemestrina
ENSSMAG00000000609	thumpd3	93	57.883	ENSMLEG00000032943	THUMPD3	91	58.531	Mandrillus_leucophaeus
ENSSMAG00000000609	thumpd3	98	81.585	ENSMAMG00000023934	thumpd3	97	80.882	Mastacembelus_armatus
ENSSMAG00000000609	thumpd3	97	85.806	ENSMZEG00005010623	thumpd3	99	83.773	Maylandia_zebra
ENSSMAG00000000609	thumpd3	81	60.945	ENSMGAG00000010182	THUMPD3	100	61.404	Meleagris_gallopavo
ENSSMAG00000000609	thumpd3	92	60.088	ENSMAUG00000012250	Thumpd3	90	58.422	Mesocricetus_auratus
ENSSMAG00000000609	thumpd3	91	55.819	ENSMICG00000010095	THUMPD3	89	56.624	Microcebus_murinus
ENSSMAG00000000609	thumpd3	92	60.394	ENSMOCG00000020148	Thumpd3	90	60.832	Microtus_ochrogaster
ENSSMAG00000000609	thumpd3	97	82.543	ENSMMOG00000021791	thumpd3	99	81.568	Mola_mola
ENSSMAG00000000609	thumpd3	92	57.451	ENSMODG00000004715	-	94	57.322	Monodelphis_domestica
ENSSMAG00000000609	thumpd3	92	84.475	ENSMALG00000017316	thumpd3	99	82.340	Monopterus_albus
ENSSMAG00000000609	thumpd3	58	52.258	MGP_CAROLIEiJ_G0028714	-	62	53.398	Mus_caroli
ENSSMAG00000000609	thumpd3	94	59.062	ENSMUSG00000030264	Thumpd3	92	59.062	Mus_musculus
ENSSMAG00000000609	thumpd3	94	59.275	MGP_PahariEiJ_G0022465	Thumpd3	96	57.637	Mus_pahari
ENSSMAG00000000609	thumpd3	94	59.062	MGP_SPRETEiJ_G0029742	Thumpd3	92	59.062	Mus_spretus
ENSSMAG00000000609	thumpd3	93	54.405	ENSMPUG00000005219	-	93	53.747	Mustela_putorius_furo
ENSSMAG00000000609	thumpd3	93	60.613	ENSMPUG00000017066	-	93	59.701	Mustela_putorius_furo
ENSSMAG00000000609	thumpd3	94	57.806	ENSMLUG00000008538	THUMPD3	92	58.017	Myotis_lucifugus
ENSSMAG00000000609	thumpd3	93	59.611	ENSNGAG00000021014	-	92	59.402	Nannospalax_galili
ENSSMAG00000000609	thumpd3	92	50.000	ENSNGAG00000001549	-	91	49.339	Nannospalax_galili
ENSSMAG00000000609	thumpd3	97	84.946	ENSNBRG00000004886	thumpd3	99	82.759	Neolamprologus_brichardi
ENSSMAG00000000609	thumpd3	93	57.667	ENSNLEG00000003863	THUMPD3	92	58.209	Nomascus_leucogenys
ENSSMAG00000000609	thumpd3	81	59.305	ENSMEUG00000009819	THUMPD3	96	59.305	Notamacropus_eugenii
ENSSMAG00000000609	thumpd3	84	58.571	ENSOPRG00000002020	THUMPD3	99	59.330	Ochotona_princeps
ENSSMAG00000000609	thumpd3	71	55.866	ENSODEG00000018242	THUMPD3	100	56.704	Octodon_degus
ENSSMAG00000000609	thumpd3	97	85.376	ENSONIG00000018977	thumpd3	99	82.696	Oreochromis_niloticus
ENSSMAG00000000609	thumpd3	82	56.459	ENSOANG00000014481	THUMPD3	97	56.459	Ornithorhynchus_anatinus
ENSSMAG00000000609	thumpd3	94	60.645	ENSOCUG00000010921	THUMPD3	95	58.388	Oryctolagus_cuniculus
ENSSMAG00000000609	thumpd3	97	79.482	ENSORLG00000000676	thumpd3	97	78.316	Oryzias_latipes
ENSSMAG00000000609	thumpd3	99	79.449	ENSORLG00020007509	thumpd3	97	79.449	Oryzias_latipes_hni
ENSSMAG00000000609	thumpd3	97	79.914	ENSORLG00015003615	thumpd3	97	78.737	Oryzias_latipes_hsok
ENSSMAG00000000609	thumpd3	96	77.609	ENSOMEG00000014115	thumpd3	99	75.256	Oryzias_melastigma
ENSSMAG00000000609	thumpd3	82	57.598	ENSOGAG00000017111	THUMPD3	99	57.635	Otolemur_garnettii
ENSSMAG00000000609	thumpd3	93	60.691	ENSOARG00000007139	THUMPD3	88	61.572	Ovis_aries
ENSSMAG00000000609	thumpd3	94	57.265	ENSPPAG00000025852	THUMPD3	92	58.422	Pan_paniscus
ENSSMAG00000000609	thumpd3	92	60.486	ENSPPRG00000008071	THUMPD3	90	60.480	Panthera_pardus
ENSSMAG00000000609	thumpd3	75	30.000	ENSPTIG00000004118	THUMPD2	76	30.000	Panthera_tigris_altaica
ENSSMAG00000000609	thumpd3	92	60.486	ENSPTIG00000017923	THUMPD3	90	60.927	Panthera_tigris_altaica
ENSSMAG00000000609	thumpd3	94	57.051	ENSPTRG00000014585	THUMPD3	92	58.209	Pan_troglodytes
ENSSMAG00000000609	thumpd3	93	57.451	ENSPANG00000016253	THUMPD3	91	58.315	Papio_anubis
ENSSMAG00000000609	thumpd3	99	66.942	ENSPKIG00000014009	thumpd3	98	66.942	Paramormyrops_kingsleyae
ENSSMAG00000000609	thumpd3	90	59.524	ENSPSIG00000007370	THUMPD3	94	58.004	Pelodiscus_sinensis
ENSSMAG00000000609	thumpd3	98	77.234	ENSPMGG00000017563	thumpd3	99	76.409	Periophthalmus_magnuspinnatus
ENSSMAG00000000609	thumpd3	92	59.300	ENSPEMG00000022411	Thumpd3	90	59.560	Peromyscus_maniculatus_bairdii
ENSSMAG00000000609	thumpd3	92	53.879	ENSPMAG00000001291	thumpd3	98	55.180	Petromyzon_marinus
ENSSMAG00000000609	thumpd3	93	58.887	ENSPCIG00000002049	THUMPD3	94	58.038	Phascolarctos_cinereus
ENSSMAG00000000609	thumpd3	97	82.581	ENSPFOG00000002318	thumpd3	99	80.120	Poecilia_formosa
ENSSMAG00000000609	thumpd3	97	82.581	ENSPLAG00000014804	thumpd3	99	80.120	Poecilia_latipinna
ENSSMAG00000000609	thumpd3	97	82.581	ENSPMEG00000000582	thumpd3	99	80.120	Poecilia_mexicana
ENSSMAG00000000609	thumpd3	97	82.479	ENSPREG00000009176	thumpd3	99	80.240	Poecilia_reticulata
ENSSMAG00000000609	thumpd3	90	44.725	ENSPPYG00000017616	-	89	44.470	Pongo_abelii
ENSSMAG00000000609	thumpd3	93	57.451	ENSPPYG00000029461	THUMPD3	91	58.315	Pongo_abelii
ENSSMAG00000000609	thumpd3	82	58.537	ENSPCAG00000015398	THUMPD3	97	59.709	Procavia_capensis
ENSSMAG00000000609	thumpd3	92	49.782	ENSPCOG00000018095	-	90	52.203	Propithecus_coquereli
ENSSMAG00000000609	thumpd3	81	53.350	ENSPCOG00000023618	-	92	52.826	Propithecus_coquereli
ENSSMAG00000000609	thumpd3	94	57.996	ENSPVAG00000008721	THUMPD3	92	58.422	Pteropus_vampyrus
ENSSMAG00000000609	thumpd3	97	85.806	ENSPNYG00000006918	thumpd3	99	83.773	Pundamilia_nyererei
ENSSMAG00000000609	thumpd3	97	71.922	ENSPNAG00000014936	thumpd3	96	71.922	Pygocentrus_nattereri
ENSSMAG00000000609	thumpd3	94	59.615	ENSRNOG00000006941	Thumpd3	91	59.188	Rattus_norvegicus
ENSSMAG00000000609	thumpd3	93	57.974	ENSRBIG00000035954	THUMPD3	92	58.836	Rhinopithecus_bieti
ENSSMAG00000000609	thumpd3	93	57.759	ENSRROG00000035734	THUMPD3	92	58.621	Rhinopithecus_roxellana
ENSSMAG00000000609	thumpd3	93	57.330	ENSSBOG00000023567	THUMPD3	92	59.020	Saimiri_boliviensis_boliviensis
ENSSMAG00000000609	thumpd3	92	58.913	ENSSHAG00000014467	THUMPD3	94	58.542	Sarcophilus_harrisii
ENSSMAG00000000609	thumpd3	96	71.550	ENSSFOG00015019210	thumpd3	95	71.550	Scleropages_formosus
ENSSMAG00000000609	thumpd3	97	87.312	ENSSDUG00000012179	thumpd3	99	86.792	Seriola_dumerili
ENSSMAG00000000609	thumpd3	97	86.882	ENSSLDG00000022028	thumpd3	99	84.274	Seriola_lalandi_dorsalis
ENSSMAG00000000609	thumpd3	80	65.584	ENSSARG00000002239	THUMPD3	82	65.584	Sorex_araneus
ENSSMAG00000000609	thumpd3	92	59.062	ENSSPUG00000017461	THUMPD3	94	58.212	Sphenodon_punctatus
ENSSMAG00000000609	thumpd3	97	85.961	ENSSPAG00000008345	thumpd3	98	83.099	Stegastes_partitus
ENSSMAG00000000609	thumpd3	92	60.480	ENSSSCG00000011542	THUMPD3	90	61.572	Sus_scrofa
ENSSMAG00000000609	thumpd3	90	61.521	ENSTGUG00000010440	THUMPD3	100	61.521	Taeniopygia_guttata
ENSSMAG00000000609	thumpd3	96	75.000	ENSTRUG00000004420	thumpd3	96	75.000	Takifugu_rubripes
ENSSMAG00000000609	thumpd3	96	80.392	ENSTNIG00000014627	thumpd3	99	80.392	Tetraodon_nigroviridis
ENSSMAG00000000609	thumpd3	94	55.011	ENSTBEG00000003450	THUMPD3	93	55.158	Tupaia_belangeri
ENSSMAG00000000609	thumpd3	93	59.913	ENSTTRG00000009694	THUMPD3	90	60.917	Tursiops_truncatus
ENSSMAG00000000609	thumpd3	92	60.573	ENSUAMG00000009412	THUMPD3	90	61.013	Ursus_americanus
ENSSMAG00000000609	thumpd3	93	61.969	ENSUMAG00000019241	THUMPD3	91	61.969	Ursus_maritimus
ENSSMAG00000000609	thumpd3	76	56.955	ENSVPAG00000002855	THUMPD3	91	58.182	Vicugna_pacos
ENSSMAG00000000609	thumpd3	92	60.262	ENSVVUG00000025278	THUMPD3	90	60.917	Vulpes_vulpes
ENSSMAG00000000609	thumpd3	90	60.619	ENSXETG00000001447	thumpd3	93	59.197	Xenopus_tropicalis
ENSSMAG00000000609	thumpd3	97	82.227	ENSXCOG00000000159	thumpd3	98	82.227	Xiphophorus_couchianus
ENSSMAG00000000609	thumpd3	97	81.624	ENSXMAG00000001423	thumpd3	99	79.600	Xiphophorus_maculatus