EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000000647 (Gene tree)
Gene ID: -
Gene Symbol: zc3hc1
Alias: zgc:154099
Full Name: zinc finger%2C C3HC-type containing 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 4956 bases
Position: chr2:17569357-17574312
Accession: ZDB-GENE-061013-94
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000001020	zf-C3HC	PF07967.13	1e-34	1	1
ENSSMAP00000001020	Rsm1	PF08600.10	1.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000001042	-	2837	-	ENSSMAP00000001020	554 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000000647's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000000647's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000000647	zc3hc1	86	43.713	ENSG00000091732	ZC3HC1	95	43.912	Homo_sapiens
ENSSMAG00000000647	zc3hc1	90	83.234	ENSAPOG00000009078	zc3hc1	100	83.034	Acanthochromis_polyacanthus
ENSSMAG00000000647	zc3hc1	86	43.976	ENSAMEG00000005425	ZC3HC1	95	43.976	Ailuropoda_melanoleuca
ENSSMAG00000000647	zc3hc1	90	81.312	ENSACIG00000019513	zc3hc1	100	81.312	Amphilophus_citrinellus
ENSSMAG00000000647	zc3hc1	90	82.236	ENSAOCG00000024310	zc3hc1	100	82.236	Amphiprion_ocellaris
ENSSMAG00000000647	zc3hc1	90	81.836	ENSAPEG00000004907	zc3hc1	100	81.836	Amphiprion_percula
ENSSMAG00000000647	zc3hc1	78	83.180	ENSATEG00000016898	zc3hc1	90	83.180	Anabas_testudineus
ENSSMAG00000000647	zc3hc1	79	42.731	ENSAPLG00000003832	ZC3HC1	97	44.444	Anas_platyrhynchos
ENSSMAG00000000647	zc3hc1	87	42.829	ENSACAG00000001638	ZC3HC1	97	42.633	Anolis_carolinensis
ENSSMAG00000000647	zc3hc1	86	41.833	ENSANAG00000022213	ZC3HC1	95	41.833	Aotus_nancymaae
ENSSMAG00000000647	zc3hc1	82	83.260	ENSACLG00000025033	zc3hc1	99	83.260	Astatotilapia_calliptera
ENSSMAG00000000647	zc3hc1	85	53.347	ENSAMXG00000036792	zc3hc1	97	52.720	Astyanax_mexicanus
ENSSMAG00000000647	zc3hc1	86	43.800	ENSBTAG00000011247	ZC3HC1	95	44.643	Bos_taurus
ENSSMAG00000000647	zc3hc1	86	43.713	ENSCJAG00000010536	ZC3HC1	95	43.713	Callithrix_jacchus
ENSSMAG00000000647	zc3hc1	86	44.444	ENSCAFG00000028735	-	95	43.838	Canis_familiaris
ENSSMAG00000000647	zc3hc1	86	44.444	ENSCAFG00000029401	-	94	43.838	Canis_familiaris
ENSSMAG00000000647	zc3hc1	86	44.578	ENSCAFG00000001499	-	94	43.976	Canis_familiaris
ENSSMAG00000000647	zc3hc1	86	44.848	ENSCAFG00000031850	-	95	44.242	Canis_familiaris
ENSSMAG00000000647	zc3hc1	86	43.662	ENSCAFG00020023333	-	95	43.058	Canis_lupus_dingo
ENSSMAG00000000647	zc3hc1	86	44.646	ENSCAFG00020006829	-	95	44.040	Canis_lupus_dingo
ENSSMAG00000000647	zc3hc1	86	39.638	ENSCHIG00000014103	ZC3HC1	95	39.919	Capra_hircus
ENSSMAG00000000647	zc3hc1	86	42.914	ENSTSYG00000002843	ZC3HC1	95	42.515	Carlito_syrichta
ENSSMAG00000000647	zc3hc1	78	39.198	ENSCAPG00000016300	ZC3HC1	94	38.170	Cavia_aperea
ENSSMAG00000000647	zc3hc1	86	44.910	ENSCPOG00000014034	ZC3HC1	96	44.467	Cavia_porcellus
ENSSMAG00000000647	zc3hc1	86	32.056	ENSCCAG00000020384	ZC3HC1	99	37.247	Cebus_capucinus
ENSSMAG00000000647	zc3hc1	86	43.313	ENSCATG00000023130	ZC3HC1	95	43.513	Cercocebus_atys
ENSSMAG00000000647	zc3hc1	74	35.377	ENSCLAG00000008260	ZC3HC1	88	32.134	Chinchilla_lanigera
ENSSMAG00000000647	zc3hc1	66	41.192	ENSCSAG00000009881	ZC3HC1	97	41.192	Chlorocebus_sabaeus
ENSSMAG00000000647	zc3hc1	78	46.358	ENSCHOG00000011846	ZC3HC1	96	45.695	Choloepus_hoffmanni
ENSSMAG00000000647	zc3hc1	87	44.533	ENSCPBG00000017519	ZC3HC1	97	44.334	Chrysemys_picta_bellii
ENSSMAG00000000647	zc3hc1	86	43.313	ENSCANG00000029091	ZC3HC1	95	43.513	Colobus_angolensis_palliatus
ENSSMAG00000000647	zc3hc1	86	43.232	ENSCGRG00001018805	Zc3hc1	95	43.434	Cricetulus_griseus_chok1gshd
ENSSMAG00000000647	zc3hc1	86	42.020	ENSCGRG00000017114	Zc3hc1	95	42.424	Cricetulus_griseus_crigri
ENSSMAG00000000647	zc3hc1	91	75.000	ENSCSEG00000009284	zc3hc1	99	74.803	Cynoglossus_semilaevis
ENSSMAG00000000647	zc3hc1	90	70.942	ENSCVAG00000011566	zc3hc1	99	70.541	Cyprinodon_variegatus
ENSSMAG00000000647	zc3hc1	90	60.239	ENSDARG00000062651	zc3hc1	100	60.040	Danio_rerio
ENSSMAG00000000647	zc3hc1	85	44.556	ENSDNOG00000045016	ZC3HC1	94	44.196	Dasypus_novemcinctus
ENSSMAG00000000647	zc3hc1	74	46.099	ENSDORG00000008697	Zc3hc1	85	51.163	Dipodomys_ordii
ENSSMAG00000000647	zc3hc1	79	46.460	ENSEASG00005008789	ZC3HC1	93	46.903	Equus_asinus_asinus
ENSSMAG00000000647	zc3hc1	86	43.927	ENSECAG00000017886	ZC3HC1	95	44.332	Equus_caballus
ENSSMAG00000000647	zc3hc1	58	50.000	ENSEEUG00000003123	ZC3HC1	66	49.412	Erinaceus_europaeus
ENSSMAG00000000647	zc3hc1	89	60.079	ENSELUG00000023168	zc3hc1	99	60.588	Esox_lucius
ENSSMAG00000000647	zc3hc1	86	43.800	ENSFCAG00000010429	ZC3HC1	95	43.600	Felis_catus
ENSSMAG00000000647	zc3hc1	77	43.237	ENSFALG00000005006	ZC3HC1	94	42.257	Ficedula_albicollis
ENSSMAG00000000647	zc3hc1	86	44.578	ENSFDAG00000019897	ZC3HC1	95	46.847	Fukomys_damarensis
ENSSMAG00000000647	zc3hc1	90	72.289	ENSFHEG00000020149	zc3hc1	99	71.227	Fundulus_heteroclitus
ENSSMAG00000000647	zc3hc1	89	66.935	ENSGMOG00000002914	zc3hc1	99	65.927	Gadus_morhua
ENSSMAG00000000647	zc3hc1	85	42.626	ENSGALG00000008003	ZC3HC1	95	41.818	Gallus_gallus
ENSSMAG00000000647	zc3hc1	90	74.297	ENSGAFG00000016095	zc3hc1	99	73.896	Gambusia_affinis
ENSSMAG00000000647	zc3hc1	90	77.711	ENSGACG00000019706	zc3hc1	100	76.707	Gasterosteus_aculeatus
ENSSMAG00000000647	zc3hc1	70	43.765	ENSGAGG00000016106	ZC3HC1	99	44.743	Gopherus_agassizii
ENSSMAG00000000647	zc3hc1	86	43.912	ENSGGOG00000015504	ZC3HC1	95	44.112	Gorilla_gorilla
ENSSMAG00000000647	zc3hc1	90	81.800	ENSHBUG00000008347	zc3hc1	100	81.800	Haplochromis_burtoni
ENSSMAG00000000647	zc3hc1	86	44.600	ENSHGLG00000005085	ZC3HC1	96	44.200	Heterocephalus_glaber_female
ENSSMAG00000000647	zc3hc1	86	44.600	ENSHGLG00100011395	ZC3HC1	96	44.200	Heterocephalus_glaber_male
ENSSMAG00000000647	zc3hc1	90	69.739	ENSHCOG00000014309	zc3hc1	100	69.539	Hippocampus_comes
ENSSMAG00000000647	zc3hc1	86	42.656	ENSSTOG00000023599	-	95	42.857	Ictidomys_tridecemlineatus
ENSSMAG00000000647	zc3hc1	93	75.723	ENSKMAG00000015315	zc3hc1	96	75.530	Kryptolebias_marmoratus
ENSSMAG00000000647	zc3hc1	90	76.832	ENSLBEG00000017325	zc3hc1	100	76.832	Labrus_bergylta
ENSSMAG00000000647	zc3hc1	72	45.199	ENSLACG00000013032	ZC3HC1	98	44.965	Latimeria_chalumnae
ENSSMAG00000000647	zc3hc1	90	53.488	ENSLOCG00000015963	zc3hc1	99	53.101	Lepisosteus_oculatus
ENSSMAG00000000647	zc3hc1	86	44.289	ENSLAFG00000001292	ZC3HC1	95	44.289	Loxodonta_africana
ENSSMAG00000000647	zc3hc1	86	43.513	ENSMFAG00000030176	ZC3HC1	95	43.713	Macaca_fascicularis
ENSSMAG00000000647	zc3hc1	86	42.430	ENSMMUG00000006155	ZC3HC1	98	41.406	Macaca_mulatta
ENSSMAG00000000647	zc3hc1	86	43.513	ENSMNEG00000011833	ZC3HC1	98	41.344	Macaca_nemestrina
ENSSMAG00000000647	zc3hc1	86	43.513	ENSMLEG00000027328	ZC3HC1	98	41.451	Mandrillus_leucophaeus
ENSSMAG00000000647	zc3hc1	90	83.433	ENSMAMG00000010691	zc3hc1	100	83.433	Mastacembelus_armatus
ENSSMAG00000000647	zc3hc1	90	81.600	ENSMZEG00005007142	zc3hc1	100	81.600	Maylandia_zebra
ENSSMAG00000000647	zc3hc1	85	40.837	ENSMGAG00000002977	ZC3HC1	95	40.954	Meleagris_gallopavo
ENSSMAG00000000647	zc3hc1	74	40.972	ENSMAUG00000017032	Zc3hc1	91	40.972	Mesocricetus_auratus
ENSSMAG00000000647	zc3hc1	86	43.800	ENSMICG00000009167	ZC3HC1	95	44.000	Microcebus_murinus
ENSSMAG00000000647	zc3hc1	86	44.153	ENSMOCG00000015239	Zc3hc1	95	46.866	Microtus_ochrogaster
ENSSMAG00000000647	zc3hc1	79	77.677	ENSMMOG00000002204	zc3hc1	99	77.677	Mola_mola
ENSSMAG00000000647	zc3hc1	88	33.205	ENSMODG00000014630	ZC3HC1	97	32.892	Monodelphis_domestica
ENSSMAG00000000647	zc3hc1	88	79.550	ENSMALG00000014447	zc3hc1	100	79.000	Monopterus_albus
ENSSMAG00000000647	zc3hc1	86	41.551	MGP_CAROLIEiJ_G0028183	Zc3hc1	95	41.434	Mus_caroli
ENSSMAG00000000647	zc3hc1	86	41.800	ENSMUSG00000039130	Zc3hc1	95	41.683	Mus_musculus
ENSSMAG00000000647	zc3hc1	86	39.879	MGP_PahariEiJ_G0021941	Zc3hc1	92	44.280	Mus_pahari
ENSSMAG00000000647	zc3hc1	86	41.884	MGP_SPRETEiJ_G0029183	Zc3hc1	95	41.767	Mus_spretus
ENSSMAG00000000647	zc3hc1	81	43.497	ENSMPUG00000005297	ZC3HC1	90	43.376	Mustela_putorius_furo
ENSSMAG00000000647	zc3hc1	86	44.890	ENSMLUG00000000063	-	95	44.689	Myotis_lucifugus
ENSSMAG00000000647	zc3hc1	61	40.169	ENSMLUG00000029228	-	99	40.169	Myotis_lucifugus
ENSSMAG00000000647	zc3hc1	86	44.646	ENSNGAG00000019014	Zc3hc1	95	44.848	Nannospalax_galili
ENSSMAG00000000647	zc3hc1	90	81.200	ENSNBRG00000004577	zc3hc1	100	81.200	Neolamprologus_brichardi
ENSSMAG00000000647	zc3hc1	85	43.585	ENSNLEG00000012698	ZC3HC1	97	41.953	Nomascus_leucogenys
ENSSMAG00000000647	zc3hc1	86	44.200	ENSMEUG00000011023	ZC3HC1	95	43.400	Notamacropus_eugenii
ENSSMAG00000000647	zc3hc1	86	43.713	ENSODEG00000014604	ZC3HC1	96	43.487	Octodon_degus
ENSSMAG00000000647	zc3hc1	90	82.000	ENSONIG00000011644	zc3hc1	100	82.000	Oreochromis_niloticus
ENSSMAG00000000647	zc3hc1	78	40.476	ENSOANG00000011460	ZC3HC1	95	40.476	Ornithorhynchus_anatinus
ENSSMAG00000000647	zc3hc1	86	43.625	ENSOCUG00000017137	ZC3HC1	95	43.426	Oryctolagus_cuniculus
ENSSMAG00000000647	zc3hc1	89	76.316	ENSORLG00000014409	zc3hc1	99	75.595	Oryzias_latipes
ENSSMAG00000000647	zc3hc1	89	76.721	ENSORLG00020015874	zc3hc1	99	75.992	Oryzias_latipes_hni
ENSSMAG00000000647	zc3hc1	89	75.911	ENSORLG00015014641	zc3hc1	99	75.198	Oryzias_latipes_hsok
ENSSMAG00000000647	zc3hc1	89	76.721	ENSOMEG00000000215	zc3hc1	99	75.944	Oryzias_melastigma
ENSSMAG00000000647	zc3hc1	89	76.316	ENSOMEG00000020604	zc3hc1	99	75.547	Oryzias_melastigma
ENSSMAG00000000647	zc3hc1	86	38.600	ENSOGAG00000026193	ZC3HC1	95	39.000	Otolemur_garnettii
ENSSMAG00000000647	zc3hc1	86	43.254	ENSOARG00000004907	ZC3HC1	94	43.539	Ovis_aries
ENSSMAG00000000647	zc3hc1	86	43.713	ENSPPAG00000043172	ZC3HC1	95	43.912	Pan_paniscus
ENSSMAG00000000647	zc3hc1	86	43.976	ENSPPRG00000001004	ZC3HC1	95	43.775	Panthera_pardus
ENSSMAG00000000647	zc3hc1	86	44.177	ENSPTIG00000007823	ZC3HC1	95	43.976	Panthera_tigris_altaica
ENSSMAG00000000647	zc3hc1	86	43.713	ENSPTRG00000019685	ZC3HC1	95	43.912	Pan_troglodytes
ENSSMAG00000000647	zc3hc1	85	43.750	ENSPANG00000014229	ZC3HC1	95	42.629	Papio_anubis
ENSSMAG00000000647	zc3hc1	89	53.057	ENSPKIG00000007172	zc3hc1	99	52.930	Paramormyrops_kingsleyae
ENSSMAG00000000647	zc3hc1	79	43.791	ENSPSIG00000016646	ZC3HC1	87	43.133	Pelodiscus_sinensis
ENSSMAG00000000647	zc3hc1	86	67.292	ENSPMGG00000003548	zc3hc1	95	66.667	Periophthalmus_magnuspinnatus
ENSSMAG00000000647	zc3hc1	86	41.988	ENSPEMG00000000514	Zc3hc1	95	42.626	Peromyscus_maniculatus_bairdii
ENSSMAG00000000647	zc3hc1	86	40.918	ENSPCIG00000020619	ZC3HC1	99	41.220	Phascolarctos_cinereus
ENSSMAG00000000647	zc3hc1	90	74.096	ENSPFOG00000003466	zc3hc1	99	73.695	Poecilia_formosa
ENSSMAG00000000647	zc3hc1	90	74.297	ENSPLAG00000022211	zc3hc1	99	73.896	Poecilia_latipinna
ENSSMAG00000000647	zc3hc1	90	73.896	ENSPMEG00000001458	zc3hc1	99	73.494	Poecilia_mexicana
ENSSMAG00000000647	zc3hc1	90	74.096	ENSPREG00000004004	zc3hc1	99	73.695	Poecilia_reticulata
ENSSMAG00000000647	zc3hc1	85	41.365	ENSPPYG00000017998	ZC3HC1	94	41.365	Pongo_abelii
ENSSMAG00000000647	zc3hc1	79	45.575	ENSPCAG00000001182	ZC3HC1	94	45.796	Procavia_capensis
ENSSMAG00000000647	zc3hc1	86	43.600	ENSPCOG00000017354	ZC3HC1	95	43.600	Propithecus_coquereli
ENSSMAG00000000647	zc3hc1	86	41.548	ENSPVAG00000003195	ZC3HC1	95	41.260	Pteropus_vampyrus
ENSSMAG00000000647	zc3hc1	90	81.600	ENSPNYG00000020692	zc3hc1	100	81.600	Pundamilia_nyererei
ENSSMAG00000000647	zc3hc1	88	53.200	ENSPNAG00000020746	zc3hc1	96	54.451	Pygocentrus_nattereri
ENSSMAG00000000647	zc3hc1	86	41.400	ENSRNOG00000010154	Zc3hc1	95	41.283	Rattus_norvegicus
ENSSMAG00000000647	zc3hc1	78	45.575	ENSRBIG00000029409	ZC3HC1	85	56.195	Rhinopithecus_bieti
ENSSMAG00000000647	zc3hc1	86	42.914	ENSRROG00000041831	ZC3HC1	95	43.513	Rhinopithecus_roxellana
ENSSMAG00000000647	zc3hc1	74	49.593	ENSSBOG00000032787	ZC3HC1	95	34.531	Saimiri_boliviensis_boliviensis
ENSSMAG00000000647	zc3hc1	79	44.789	ENSSHAG00000002529	ZC3HC1	94	44.000	Sarcophilus_harrisii
ENSSMAG00000000647	zc3hc1	90	54.669	ENSSFOG00015003667	zc3hc1	96	53.891	Scleropages_formosus
ENSSMAG00000000647	zc3hc1	92	85.039	ENSSDUG00000004241	zc3hc1	99	83.858	Seriola_dumerili
ENSSMAG00000000647	zc3hc1	92	85.433	ENSSLDG00000025056	zc3hc1	99	84.252	Seriola_lalandi_dorsalis
ENSSMAG00000000647	zc3hc1	86	40.162	ENSSARG00000012013	ZC3HC1	95	40.041	Sorex_araneus
ENSSMAG00000000647	zc3hc1	74	39.535	ENSSPUG00000000778	ZC3HC1	81	39.443	Sphenodon_punctatus
ENSSMAG00000000647	zc3hc1	90	84.032	ENSSPAG00000020041	zc3hc1	100	83.832	Stegastes_partitus
ENSSMAG00000000647	zc3hc1	86	43.750	ENSSSCG00000016565	ZC3HC1	99	43.069	Sus_scrofa
ENSSMAG00000000647	zc3hc1	90	67.404	ENSTRUG00000020077	zc3hc1	99	67.404	Takifugu_rubripes
ENSSMAG00000000647	zc3hc1	90	68.000	ENSTNIG00000007585	zc3hc1	99	69.362	Tetraodon_nigroviridis
ENSSMAG00000000647	zc3hc1	86	36.454	ENSTBEG00000005216	ZC3HC1	96	36.255	Tupaia_belangeri
ENSSMAG00000000647	zc3hc1	85	43.293	ENSTTRG00000008458	ZC3HC1	98	42.683	Tursiops_truncatus
ENSSMAG00000000647	zc3hc1	86	44.040	ENSUAMG00000020249	ZC3HC1	95	44.153	Ursus_americanus
ENSSMAG00000000647	zc3hc1	86	43.600	ENSUMAG00000009268	ZC3HC1	95	43.952	Ursus_maritimus
ENSSMAG00000000647	zc3hc1	56	42.368	ENSVPAG00000010846	ZC3HC1	53	45.756	Vicugna_pacos
ENSSMAG00000000647	zc3hc1	81	44.872	ENSVVUG00000012386	ZC3HC1	94	44.231	Vulpes_vulpes
ENSSMAG00000000647	zc3hc1	80	40.305	ENSXETG00000033900	zc3hc1	92	39.651	Xenopus_tropicalis
ENSSMAG00000000647	zc3hc1	90	72.892	ENSXCOG00000013570	zc3hc1	99	72.490	Xiphophorus_couchianus
ENSSMAG00000000647	zc3hc1	82	76.703	ENSXMAG00000010979	zc3hc1	98	76.264	Xiphophorus_maculatus