EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000000903 (Gene tree)
Gene ID: -
Gene Symbol: rpusd2
Alias: -
Full Name: RNA pseudouridine synthase domain containing 2
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 2523 bases
Position: chr17:10282245-10284767
Accession: ZDB-GENE-120411-43
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000001401	PseudoU_synth_2	PF00849.22	4.1e-30	1	1
ENSSMAP00000001393	PseudoU_synth_2	PF00849.22	5e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000001425	-	1884	-	ENSSMAP00000001393	588 (aa)	-	-
ENSSMAT00000001433	-	1714	-	ENSSMAP00000001401	527 (aa)	-	A0A2U9CIR3

Gene Model

Click here to download ENSSMAG00000000903's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000000903's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000000903	rpusd2	91	56.485	ENSG00000166133	RPUSD2	82	56.485	Homo_sapiens
ENSSMAG00000000903	rpusd2	100	77.985	ENSAPOG00000000817	rpusd2	100	73.367	Acanthochromis_polyacanthus
ENSSMAG00000000903	rpusd2	94	55.400	ENSAMEG00000016996	RPUSD2	86	55.422	Ailuropoda_melanoleuca
ENSSMAG00000000903	rpusd2	100	76.075	ENSACIG00000024029	rpusd2	100	76.075	Amphilophus_citrinellus
ENSSMAG00000000903	rpusd2	100	78.212	ENSAOCG00000015237	rpusd2	100	74.167	Amphiprion_ocellaris
ENSSMAG00000000903	rpusd2	100	77.570	ENSAPEG00000021763	rpusd2	100	73.579	Amphiprion_percula
ENSSMAG00000000903	rpusd2	100	77.222	ENSATEG00000015242	rpusd2	100	73.090	Anabas_testudineus
ENSSMAG00000000903	rpusd2	85	59.111	ENSAPLG00000004723	RPUSD2	100	59.111	Anas_platyrhynchos
ENSSMAG00000000903	rpusd2	88	58.422	ENSACAG00000013893	RPUSD2	95	57.260	Anolis_carolinensis
ENSSMAG00000000903	rpusd2	99	53.030	ENSANAG00000009691	RPUSD2	84	55.419	Aotus_nancymaae
ENSSMAG00000000903	rpusd2	100	76.030	ENSACLG00000019531	rpusd2	100	71.859	Astatotilapia_calliptera
ENSSMAG00000000903	rpusd2	94	67.245	ENSAMXG00000013376	rpusd2	85	67.442	Astyanax_mexicanus
ENSSMAG00000000903	rpusd2	93	55.738	ENSBTAG00000003193	RPUSD2	93	52.583	Bos_taurus
ENSSMAG00000000903	rpusd2	54	41.754	WBGene00019498	K07E8.7	75	41.754	Caenorhabditis_elegans
ENSSMAG00000000903	rpusd2	99	52.751	ENSCJAG00000020841	RPUSD2	84	55.123	Callithrix_jacchus
ENSSMAG00000000903	rpusd2	99	52.319	ENSCAFG00000009165	RPUSD2	85	54.618	Canis_familiaris
ENSSMAG00000000903	rpusd2	99	52.319	ENSCAFG00020005849	RPUSD2	85	54.618	Canis_lupus_dingo
ENSSMAG00000000903	rpusd2	99	52.886	ENSCHIG00000006152	RPUSD2	83	55.328	Capra_hircus
ENSSMAG00000000903	rpusd2	93	56.122	ENSTSYG00000012844	RPUSD2	85	56.122	Carlito_syrichta
ENSSMAG00000000903	rpusd2	98	54.095	ENSCPOG00000013201	RPUSD2	84	55.400	Cavia_porcellus
ENSSMAG00000000903	rpusd2	93	55.328	ENSCCAG00000024378	RPUSD2	84	55.328	Cebus_capucinus
ENSSMAG00000000903	rpusd2	91	56.458	ENSCATG00000043734	RPUSD2	83	56.458	Cercocebus_atys
ENSSMAG00000000903	rpusd2	99	53.920	ENSCLAG00000011862	RPUSD2	82	56.576	Chinchilla_lanigera
ENSSMAG00000000903	rpusd2	91	56.485	ENSCSAG00000007538	RPUSD2	87	56.695	Chlorocebus_sabaeus
ENSSMAG00000000903	rpusd2	70	53.930	ENSCHOG00000004834	RPUSD2	63	54.472	Choloepus_hoffmanni
ENSSMAG00000000903	rpusd2	92	59.118	ENSCPBG00000013419	RPUSD2	98	55.376	Chrysemys_picta_bellii
ENSSMAG00000000903	rpusd2	91	56.667	ENSCANG00000003659	RPUSD2	83	56.667	Colobus_angolensis_palliatus
ENSSMAG00000000903	rpusd2	91	56.757	ENSCGRG00001009839	Rpusd2	78	56.757	Cricetulus_griseus_chok1gshd
ENSSMAG00000000903	rpusd2	91	56.757	ENSCGRG00000012348	Rpusd2	80	56.757	Cricetulus_griseus_crigri
ENSSMAG00000000903	rpusd2	100	70.489	ENSCSEG00000001953	rpusd2	91	70.055	Cynoglossus_semilaevis
ENSSMAG00000000903	rpusd2	97	76.654	ENSCVAG00000010848	rpusd2	90	75.283	Cyprinodon_variegatus
ENSSMAG00000000903	rpusd2	94	68.000	ENSDARG00000060992	rpusd2	82	69.000	Danio_rerio
ENSSMAG00000000903	rpusd2	99	53.890	ENSDNOG00000047745	RPUSD2	83	56.757	Dasypus_novemcinctus
ENSSMAG00000000903	rpusd2	87	56.863	ENSDORG00000009092	Rpusd2	99	56.863	Dipodomys_ordii
ENSSMAG00000000903	rpusd2	85	46.272	FBgn0032256	RluA-2	78	46.272	Drosophila_melanogaster
ENSSMAG00000000903	rpusd2	86	45.877	FBgn0051719	RluA-1	63	45.877	Drosophila_melanogaster
ENSSMAG00000000903	rpusd2	98	54.913	ENSETEG00000008581	RPUSD2	85	57.054	Echinops_telfairi
ENSSMAG00000000903	rpusd2	83	35.189	ENSEBUG00000012149	rpusd2	83	35.189	Eptatretus_burgeri
ENSSMAG00000000903	rpusd2	93	55.918	ENSEASG00005016463	RPUSD2	82	55.918	Equus_asinus_asinus
ENSSMAG00000000903	rpusd2	93	55.918	ENSECAG00000024178	RPUSD2	82	55.918	Equus_caballus
ENSSMAG00000000903	rpusd2	99	47.228	ENSEEUG00000005132	RPUSD2	94	46.629	Erinaceus_europaeus
ENSSMAG00000000903	rpusd2	99	65.849	ENSELUG00000016786	rpusd2	88	68.938	Esox_lucius
ENSSMAG00000000903	rpusd2	94	54.800	ENSFCAG00000040796	RPUSD2	85	54.819	Felis_catus
ENSSMAG00000000903	rpusd2	86	60.440	ENSFALG00000001122	RPUSD2	97	60.645	Ficedula_albicollis
ENSSMAG00000000903	rpusd2	93	55.010	ENSFDAG00000003070	RPUSD2	90	55.010	Fukomys_damarensis
ENSSMAG00000000903	rpusd2	96	75.644	ENSFHEG00000007518	rpusd2	86	76.923	Fundulus_heteroclitus
ENSSMAG00000000903	rpusd2	94	70.635	ENSGMOG00000011014	rpusd2	98	70.541	Gadus_morhua
ENSSMAG00000000903	rpusd2	94	59.082	ENSGALG00000041216	RPUSD2	97	59.192	Gallus_gallus
ENSSMAG00000000903	rpusd2	95	74.751	ENSGAFG00000003390	rpusd2	88	71.402	Gambusia_affinis
ENSSMAG00000000903	rpusd2	99	77.589	ENSGACG00000008656	rpusd2	99	77.589	Gasterosteus_aculeatus
ENSSMAG00000000903	rpusd2	92	60.243	ENSGAGG00000013098	RPUSD2	90	60.243	Gopherus_agassizii
ENSSMAG00000000903	rpusd2	91	56.485	ENSGGOG00000006684	RPUSD2	82	56.485	Gorilla_gorilla
ENSSMAG00000000903	rpusd2	100	76.217	ENSHBUG00000023777	rpusd2	100	72.437	Haplochromis_burtoni
ENSSMAG00000000903	rpusd2	94	54.970	ENSHGLG00000012765	RPUSD2	84	54.970	Heterocephalus_glaber_female
ENSSMAG00000000903	rpusd2	94	54.970	ENSHGLG00100006653	RPUSD2	84	54.970	Heterocephalus_glaber_male
ENSSMAG00000000903	rpusd2	98	73.846	ENSHCOG00000015587	rpusd2	100	67.000	Hippocampus_comes
ENSSMAG00000000903	rpusd2	94	69.091	ENSIPUG00000021006	rpusd2	81	69.091	Ictalurus_punctatus
ENSSMAG00000000903	rpusd2	98	54.633	ENSSTOG00000025619	RPUSD2	83	56.187	Ictidomys_tridecemlineatus
ENSSMAG00000000903	rpusd2	88	58.280	ENSJJAG00000023160	Rpusd2	84	57.469	Jaculus_jaculus
ENSSMAG00000000903	rpusd2	96	76.172	ENSKMAG00000006618	rpusd2	85	76.541	Kryptolebias_marmoratus
ENSSMAG00000000903	rpusd2	98	77.735	ENSLBEG00000021571	rpusd2	99	72.727	Labrus_bergylta
ENSSMAG00000000903	rpusd2	87	59.565	ENSLACG00000017338	RPUSD2	99	59.565	Latimeria_chalumnae
ENSSMAG00000000903	rpusd2	96	65.476	ENSLOCG00000014755	rpusd2	95	66.129	Lepisosteus_oculatus
ENSSMAG00000000903	rpusd2	91	56.485	ENSLAFG00000015588	RPUSD2	84	56.485	Loxodonta_africana
ENSSMAG00000000903	rpusd2	91	56.458	ENSMFAG00000045062	RPUSD2	83	56.458	Macaca_fascicularis
ENSSMAG00000000903	rpusd2	91	56.695	ENSMMUG00000001483	RPUSD2	83	56.458	Macaca_mulatta
ENSSMAG00000000903	rpusd2	91	49.482	ENSMNEG00000041429	RPUSD2	83	49.275	Macaca_nemestrina
ENSSMAG00000000903	rpusd2	69	54.645	ENSMLEG00000036551	RPUSD2	80	54.645	Mandrillus_leucophaeus
ENSSMAG00000000903	rpusd2	100	74.908	ENSMAMG00000001077	rpusd2	98	71.476	Mastacembelus_armatus
ENSSMAG00000000903	rpusd2	100	76.030	ENSMZEG00005006947	rpusd2	100	76.030	Maylandia_zebra
ENSSMAG00000000903	rpusd2	89	60.554	ENSMGAG00000003058	RPUSD2	97	60.554	Meleagris_gallopavo
ENSSMAG00000000903	rpusd2	91	55.785	ENSMAUG00000020467	Rpusd2	80	55.785	Mesocricetus_auratus
ENSSMAG00000000903	rpusd2	93	55.714	ENSMICG00000028637	RPUSD2	84	55.714	Microcebus_murinus
ENSSMAG00000000903	rpusd2	91	56.549	ENSMOCG00000020061	Rpusd2	81	56.549	Microtus_ochrogaster
ENSSMAG00000000903	rpusd2	100	77.528	ENSMMOG00000012020	rpusd2	99	72.773	Mola_mola
ENSSMAG00000000903	rpusd2	90	57.411	ENSMODG00000000300	RPUSD2	83	57.411	Monodelphis_domestica
ENSSMAG00000000903	rpusd2	100	76.243	ENSMALG00000010024	rpusd2	100	73.554	Monopterus_albus
ENSSMAG00000000903	rpusd2	91	55.717	MGP_CAROLIEiJ_G0024130	Rpusd2	80	55.717	Mus_caroli
ENSSMAG00000000903	rpusd2	91	56.757	ENSMUSG00000027324	Rpusd2	80	56.757	Mus_musculus
ENSSMAG00000000903	rpusd2	91	56.549	MGP_PahariEiJ_G0025573	Rpusd2	80	56.549	Mus_pahari
ENSSMAG00000000903	rpusd2	91	56.965	MGP_SPRETEiJ_G0025046	Rpusd2	81	56.965	Mus_spretus
ENSSMAG00000000903	rpusd2	94	55.221	ENSMPUG00000008517	RPUSD2	85	55.221	Mustela_putorius_furo
ENSSMAG00000000903	rpusd2	91	56.875	ENSMLUG00000007971	RPUSD2	98	54.151	Myotis_lucifugus
ENSSMAG00000000903	rpusd2	91	57.380	ENSNGAG00000014126	Rpusd2	82	57.380	Nannospalax_galili
ENSSMAG00000000903	rpusd2	100	75.094	ENSNBRG00000010070	rpusd2	100	71.022	Neolamprologus_brichardi
ENSSMAG00000000903	rpusd2	91	56.276	ENSNLEG00000035735	RPUSD2	82	56.276	Nomascus_leucogenys
ENSSMAG00000000903	rpusd2	91	57.588	ENSMEUG00000008500	RPUSD2	86	57.588	Notamacropus_eugenii
ENSSMAG00000000903	rpusd2	97	55.382	ENSOPRG00000014177	-	84	56.735	Ochotona_princeps
ENSSMAG00000000903	rpusd2	98	53.772	ENSODEG00000017193	RPUSD2	82	56.632	Octodon_degus
ENSSMAG00000000903	rpusd2	99	75.327	ENSONIG00000020102	rpusd2	100	74.345	Oreochromis_niloticus
ENSSMAG00000000903	rpusd2	93	56.364	ENSOCUG00000015745	RPUSD2	81	56.364	Oryctolagus_cuniculus
ENSSMAG00000000903	rpusd2	98	71.785	ENSORLG00000015516	rpusd2	99	65.593	Oryzias_latipes
ENSSMAG00000000903	rpusd2	98	71.593	ENSORLG00020010533	rpusd2	99	65.372	Oryzias_latipes_hni
ENSSMAG00000000903	rpusd2	98	70.802	ENSORLG00015009206	rpusd2	99	64.983	Oryzias_latipes_hsok
ENSSMAG00000000903	rpusd2	96	72.461	ENSOMEG00000007355	rpusd2	85	70.240	Oryzias_melastigma
ENSSMAG00000000903	rpusd2	91	56.042	ENSOGAG00000004867	RPUSD2	86	56.042	Otolemur_garnettii
ENSSMAG00000000903	rpusd2	99	53.208	ENSOARG00000020235	RPUSD2	94	53.235	Ovis_aries
ENSSMAG00000000903	rpusd2	91	56.485	ENSPPAG00000032874	RPUSD2	82	56.485	Pan_paniscus
ENSSMAG00000000903	rpusd2	99	52.632	ENSPPRG00000010446	RPUSD2	93	52.045	Panthera_pardus
ENSSMAG00000000903	rpusd2	99	52.632	ENSPTIG00000013316	RPUSD2	93	52.045	Panthera_tigris_altaica
ENSSMAG00000000903	rpusd2	91	56.485	ENSPTRG00000006924	RPUSD2	82	56.485	Pan_troglodytes
ENSSMAG00000000903	rpusd2	91	56.667	ENSPANG00000019339	RPUSD2	83	56.667	Papio_anubis
ENSSMAG00000000903	rpusd2	95	62.681	ENSPKIG00000023017	rpusd2	81	63.469	Paramormyrops_kingsleyae
ENSSMAG00000000903	rpusd2	70	57.258	ENSPSIG00000012680	RPUSD2	100	57.258	Pelodiscus_sinensis
ENSSMAG00000000903	rpusd2	80	92.000	ENSPMGG00000018165	rpusd2	83	92.000	Periophthalmus_magnuspinnatus
ENSSMAG00000000903	rpusd2	91	56.846	ENSPEMG00000012878	Rpusd2	84	56.846	Peromyscus_maniculatus_bairdii
ENSSMAG00000000903	rpusd2	74	67.251	ENSPCIG00000023199	RPUSD2	75	67.449	Phascolarctos_cinereus
ENSSMAG00000000903	rpusd2	94	74.749	ENSPFOG00000006829	rpusd2	98	66.497	Poecilia_formosa
ENSSMAG00000000903	rpusd2	94	74.498	ENSPLAG00000022914	rpusd2	96	74.498	Poecilia_latipinna
ENSSMAG00000000903	rpusd2	94	74.498	ENSPMEG00000009835	rpusd2	96	74.498	Poecilia_mexicana
ENSSMAG00000000903	rpusd2	94	75.150	ENSPREG00000016441	rpusd2	94	66.723	Poecilia_reticulata
ENSSMAG00000000903	rpusd2	91	56.159	ENSPPYG00000006355	RPUSD2	82	56.159	Pongo_abelii
ENSSMAG00000000903	rpusd2	93	55.123	ENSPCOG00000028019	RPUSD2	84	55.123	Propithecus_coquereli
ENSSMAG00000000903	rpusd2	99	53.232	ENSPVAG00000001837	RPUSD2	84	55.215	Pteropus_vampyrus
ENSSMAG00000000903	rpusd2	96	76.265	ENSPNYG00000021507	rpusd2	93	77.426	Pundamilia_nyererei
ENSSMAG00000000903	rpusd2	91	56.965	ENSRNOG00000010528	LOC100911166	80	56.965	Rattus_norvegicus
ENSSMAG00000000903	rpusd2	91	56.965	ENSRNOG00000046797	Rpusd2	80	56.965	Rattus_norvegicus
ENSSMAG00000000903	rpusd2	91	56.695	ENSRBIG00000030813	RPUSD2	83	56.667	Rhinopithecus_bieti
ENSSMAG00000000903	rpusd2	91	56.485	ENSRROG00000026664	RPUSD2	83	56.458	Rhinopithecus_roxellana
ENSSMAG00000000903	rpusd2	52	47.842	YDL036C	-	60	47.842	Saccharomyces_cerevisiae
ENSSMAG00000000903	rpusd2	55	44.295	YOL066C	RIB2	50	44.295	Saccharomyces_cerevisiae
ENSSMAG00000000903	rpusd2	93	56.148	ENSSBOG00000035031	RPUSD2	84	56.148	Saimiri_boliviensis_boliviensis
ENSSMAG00000000903	rpusd2	70	54.717	ENSSHAG00000015108	RPUSD2	91	54.717	Sarcophilus_harrisii
ENSSMAG00000000903	rpusd2	99	59.099	ENSSFOG00015019057	rpusd2	81	61.439	Scleropages_formosus
ENSSMAG00000000903	rpusd2	100	81.284	ENSSDUG00000019139	rpusd2	100	78.383	Seriola_dumerili
ENSSMAG00000000903	rpusd2	100	81.101	ENSSLDG00000005938	rpusd2	100	78.218	Seriola_lalandi_dorsalis
ENSSMAG00000000903	rpusd2	94	55.929	ENSSARG00000002792	RPUSD2	88	55.929	Sorex_araneus
ENSSMAG00000000903	rpusd2	91	57.143	ENSSPUG00000001206	RPUSD2	90	57.143	Sphenodon_punctatus
ENSSMAG00000000903	rpusd2	100	77.589	ENSSPAG00000003578	rpusd2	100	73.142	Stegastes_partitus
ENSSMAG00000000903	rpusd2	99	52.964	ENSSSCG00000036700	RPUSD2	82	55.809	Sus_scrofa
ENSSMAG00000000903	rpusd2	100	73.684	ENSTRUG00000025880	rpusd2	99	73.704	Takifugu_rubripes
ENSSMAG00000000903	rpusd2	98	74.757	ENSTNIG00000017329	rpusd2	99	74.757	Tetraodon_nigroviridis
ENSSMAG00000000903	rpusd2	99	47.701	ENSTBEG00000007933	RPUSD2	84	49.284	Tupaia_belangeri
ENSSMAG00000000903	rpusd2	99	54.221	ENSTTRG00000010585	RPUSD2	83	57.173	Tursiops_truncatus
ENSSMAG00000000903	rpusd2	99	53.759	ENSUAMG00000001470	RPUSD2	99	53.346	Ursus_americanus
ENSSMAG00000000903	rpusd2	99	53.759	ENSUMAG00000012487	RPUSD2	82	53.532	Ursus_maritimus
ENSSMAG00000000903	rpusd2	99	53.759	ENSVPAG00000003844	RPUSD2	84	56.122	Vicugna_pacos
ENSSMAG00000000903	rpusd2	99	51.948	ENSVVUG00000026590	RPUSD2	85	54.418	Vulpes_vulpes
ENSSMAG00000000903	rpusd2	91	56.504	ENSXETG00000015973	rpusd2	98	56.504	Xenopus_tropicalis
ENSSMAG00000000903	rpusd2	100	71.780	ENSXMAG00000021821	rpusd2	99	71.591	Xiphophorus_maculatus