EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000000942 (Gene tree)
Gene ID: -
Gene Symbol: rasef
Alias: si:ch73-275j21.1
Full Name: RAS and EF-hand domain containing
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 18926 bases
Position: chr9:14904579-14923504
Accession: ZDB-GENE-081105-157
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000001470	MMR_HSR1	PF01926.23	1.7e-08	1	1
ENSSMAP00000001458	MMR_HSR1	PF01926.23	1.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000001502	-	5068	-	ENSSMAP00000001470	719 (aa)	-	-
ENSSMAT00000001490	-	4668	-	ENSSMAP00000001458	836 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000000942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000000942's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000000942	rasef	70	43.069	ENSSMAG00000011200	CRACR2A	72	43.069
ENSSMAG00000000942	rasef	74	36.681	ENSSMAG00000001304	cracr2ab	73	35.772
ENSSMAG00000000942	rasef	71	64.417	ENSSMAG00000001513	zgc:162879	82	64.417
ENSSMAG00000000942	rasef	66	44.444	ENSSMAG00000013579	cracr2b	74	44.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000000942	rasef	99	48.627	ENSG00000165105	RASEF	99	49.281	Homo_sapiens
ENSSMAG00000000942	rasef	90	80.310	ENSAPOG00000024369	rasef	99	80.620	Acanthochromis_polyacanthus
ENSSMAG00000000942	rasef	95	50.959	ENSAMEG00000009467	RASEF	95	50.959	Ailuropoda_melanoleuca
ENSSMAG00000000942	rasef	95	73.907	ENSACIG00000005549	rasef	98	73.761	Amphilophus_citrinellus
ENSSMAG00000000942	rasef	94	74.853	ENSAOCG00000011464	rasef	92	74.853	Amphiprion_ocellaris
ENSSMAG00000000942	rasef	99	81.641	ENSAPEG00000003461	rasef	99	81.502	Amphiprion_percula
ENSSMAG00000000942	rasef	95	80.786	ENSATEG00000015032	rasef	100	80.669	Anabas_testudineus
ENSSMAG00000000942	rasef	88	50.076	ENSAPLG00000013969	RASEF	99	49.924	Anas_platyrhynchos
ENSSMAG00000000942	rasef	96	50.899	ENSACAG00000002155	RASEF	96	52.941	Anolis_carolinensis
ENSSMAG00000000942	rasef	99	48.758	ENSANAG00000035226	RASEF	99	48.958	Aotus_nancymaae
ENSSMAG00000000942	rasef	99	82.893	ENSACLG00000017818	rasef	99	82.893	Astatotilapia_calliptera
ENSSMAG00000000942	rasef	94	56.170	ENSAMXG00000011411	rasef	93	56.454	Astyanax_mexicanus
ENSSMAG00000000942	rasef	99	49.606	ENSBTAG00000021751	RASEF	99	49.606	Bos_taurus
ENSSMAG00000000942	rasef	99	49.279	ENSCJAG00000003547	RASEF	99	49.672	Callithrix_jacchus
ENSSMAG00000000942	rasef	92	53.451	ENSCAFG00000001453	RASEF	89	48.877	Canis_familiaris
ENSSMAG00000000942	rasef	92	53.612	ENSCAFG00020023859	RASEF	96	49.665	Canis_lupus_dingo
ENSSMAG00000000942	rasef	99	49.020	ENSCHIG00000020336	RASEF	99	49.285	Capra_hircus
ENSSMAG00000000942	rasef	75	50.538	ENSTSYG00000006987	RASEF	99	50.358	Carlito_syrichta
ENSSMAG00000000942	rasef	72	46.065	ENSCAPG00000010585	-	99	46.065	Cavia_aperea
ENSSMAG00000000942	rasef	86	50.633	ENSCPOG00000005004	RASEF	99	50.633	Cavia_porcellus
ENSSMAG00000000942	rasef	99	49.410	ENSCCAG00000031624	RASEF	99	49.803	Cebus_capucinus
ENSSMAG00000000942	rasef	71	37.977	ENSCLAG00000004622	-	88	37.786	Chinchilla_lanigera
ENSSMAG00000000942	rasef	99	48.691	ENSCSAG00000007663	RASEF	99	48.560	Chlorocebus_sabaeus
ENSSMAG00000000942	rasef	84	52.104	ENSCHOG00000001831	RASEF	96	51.942	Choloepus_hoffmanni
ENSSMAG00000000942	rasef	99	50.880	ENSCPBG00000019037	RASEF	99	50.882	Chrysemys_picta_bellii
ENSSMAG00000000942	rasef	99	48.501	ENSCANG00000034081	RASEF	99	48.892	Colobus_angolensis_palliatus
ENSSMAG00000000942	rasef	85	50.555	ENSCGRG00001001324	Rasef	99	50.396	Cricetulus_griseus_chok1gshd
ENSSMAG00000000942	rasef	80	49.832	ENSCGRG00000006455	Rasef	99	49.664	Cricetulus_griseus_crigri
ENSSMAG00000000942	rasef	92	69.335	ENSCSEG00000017898	rasef	93	69.173	Cynoglossus_semilaevis
ENSSMAG00000000942	rasef	99	79.833	ENSCVAG00000006168	rasef	96	79.694	Cyprinodon_variegatus
ENSSMAG00000000942	rasef	95	56.356	ENSDARG00000076250	rasef	98	55.244	Danio_rerio
ENSSMAG00000000942	rasef	95	51.355	ENSDNOG00000006002	RASEF	87	50.999	Dasypus_novemcinctus
ENSSMAG00000000942	rasef	79	50.171	ENSDORG00000015570	Rasef	99	49.915	Dipodomys_ordii
ENSSMAG00000000942	rasef	84	34.219	ENSEBUG00000012179	rasef	99	34.796	Eptatretus_burgeri
ENSSMAG00000000942	rasef	95	42.179	ENSEBUG00000012629	rasef	99	46.667	Eptatretus_burgeri
ENSSMAG00000000942	rasef	99	51.230	ENSEASG00005015967	RASEF	99	50.951	Equus_asinus_asinus
ENSSMAG00000000942	rasef	99	50.470	ENSECAG00000000324	RASEF	98	51.817	Equus_caballus
ENSSMAG00000000942	rasef	81	47.811	ENSEEUG00000008455	RASEF	99	47.811	Erinaceus_europaeus
ENSSMAG00000000942	rasef	95	50.748	ENSFCAG00000002416	RASEF	95	51.293	Felis_catus
ENSSMAG00000000942	rasef	86	52.441	ENSFALG00000003611	RASEF	99	52.283	Ficedula_albicollis
ENSSMAG00000000942	rasef	86	51.987	ENSFDAG00000013428	RASEF	99	51.828	Fukomys_damarensis
ENSSMAG00000000942	rasef	99	71.008	ENSFHEG00000022470	rasef	96	70.868	Fundulus_heteroclitus
ENSSMAG00000000942	rasef	82	82.184	ENSGMOG00000010090	rasef	99	82.184	Gadus_morhua
ENSSMAG00000000942	rasef	96	50.552	ENSGALG00000012576	RASEF	97	50.970	Gallus_gallus
ENSSMAG00000000942	rasef	99	77.469	ENSGAFG00000013735	rasef	98	77.222	Gambusia_affinis
ENSSMAG00000000942	rasef	99	76.870	ENSGACG00000007528	rasef	99	76.870	Gasterosteus_aculeatus
ENSSMAG00000000942	rasef	96	51.340	ENSGAGG00000007338	RASEF	95	51.763	Gopherus_agassizii
ENSSMAG00000000942	rasef	99	48.497	ENSGGOG00000006651	RASEF	99	49.150	Gorilla_gorilla
ENSSMAG00000000942	rasef	99	82.754	ENSHBUG00000010345	rasef	98	82.754	Haplochromis_burtoni
ENSSMAG00000000942	rasef	99	49.401	ENSHGLG00000000399	RASEF	99	49.134	Heterocephalus_glaber_female
ENSSMAG00000000942	rasef	86	51.669	ENSHGLG00100008043	RASEF	99	51.510	Heterocephalus_glaber_male
ENSSMAG00000000942	rasef	93	83.920	ENSHCOG00000010976	rasef	99	83.920	Hippocampus_comes
ENSSMAG00000000942	rasef	95	53.704	ENSIPUG00000008768	rasef	94	53.371	Ictalurus_punctatus
ENSSMAG00000000942	rasef	99	48.695	ENSSTOG00000004311	RASEF	99	48.831	Ictidomys_tridecemlineatus
ENSSMAG00000000942	rasef	86	52.313	ENSJJAG00000023215	Rasef	99	52.313	Jaculus_jaculus
ENSSMAG00000000942	rasef	99	77.379	ENSKMAG00000021106	rasef	99	71.293	Kryptolebias_marmoratus
ENSSMAG00000000942	rasef	95	78.174	ENSLBEG00000021098	-	99	62.742	Labrus_bergylta
ENSSMAG00000000942	rasef	96	54.302	ENSLACG00000010849	RASEF	95	55.385	Latimeria_chalumnae
ENSSMAG00000000942	rasef	95	59.033	ENSLOCG00000002094	rasef	95	58.748	Lepisosteus_oculatus
ENSSMAG00000000942	rasef	86	52.923	ENSLAFG00000010552	RASEF	99	52.765	Loxodonta_africana
ENSSMAG00000000942	rasef	99	48.370	ENSMFAG00000046414	RASEF	99	49.022	Macaca_fascicularis
ENSSMAG00000000942	rasef	99	48.182	ENSMNEG00000044341	RASEF	99	48.831	Macaca_nemestrina
ENSSMAG00000000942	rasef	99	48.370	ENSMLEG00000034579	RASEF	99	49.022	Mandrillus_leucophaeus
ENSSMAG00000000942	rasef	87	80.578	ENSMAMG00000001536	rasef	96	80.738	Mastacembelus_armatus
ENSSMAG00000000942	rasef	96	72.093	ENSMZEG00005004819	rasef	99	72.093	Maylandia_zebra
ENSSMAG00000000942	rasef	86	51.577	ENSMAUG00000010820	Rasef	99	51.420	Mesocricetus_auratus
ENSSMAG00000000942	rasef	88	52.769	ENSMICG00000011836	RASEF	99	49.541	Microcebus_murinus
ENSSMAG00000000942	rasef	87	51.659	ENSMOCG00000000943	Rasef	99	50.764	Microtus_ochrogaster
ENSSMAG00000000942	rasef	96	70.870	ENSMMOG00000000102	rasef	97	71.159	Mola_mola
ENSSMAG00000000942	rasef	99	49.608	ENSMODG00000009037	RASEF	99	52.308	Monodelphis_domestica
ENSSMAG00000000942	rasef	99	72.462	ENSMALG00000009830	rasef	99	72.184	Monopterus_albus
ENSSMAG00000000942	rasef	88	50.698	MGP_CAROLIEiJ_G0026109	Rasef	99	50.594	Mus_caroli
ENSSMAG00000000942	rasef	99	50.476	ENSMUSG00000043003	Rasef	99	50.764	Mus_musculus
ENSSMAG00000000942	rasef	88	50.153	MGP_PahariEiJ_G0028447	Rasef	99	50.168	Mus_pahari
ENSSMAG00000000942	rasef	88	50.698	MGP_SPRETEiJ_G0027075	Rasef	99	50.594	Mus_spretus
ENSSMAG00000000942	rasef	76	52.128	ENSMPUG00000013070	RASEF	95	51.950	Mustela_putorius_furo
ENSSMAG00000000942	rasef	95	50.676	ENSMLUG00000013108	RASEF	95	51.015	Myotis_lucifugus
ENSSMAG00000000942	rasef	80	51.273	ENSNGAG00000014878	Rasef	99	51.104	Nannospalax_galili
ENSSMAG00000000942	rasef	95	65.743	ENSNBRG00000012335	rasef	99	65.743	Neolamprologus_brichardi
ENSSMAG00000000942	rasef	99	48.366	ENSNLEG00000003245	RASEF	99	48.758	Nomascus_leucogenys
ENSSMAG00000000942	rasef	99	48.026	ENSMEUG00000016412	RASEF	99	50.000	Notamacropus_eugenii
ENSSMAG00000000942	rasef	85	47.368	ENSOPRG00000002742	-	80	47.368	Ochotona_princeps
ENSSMAG00000000942	rasef	99	82.615	ENSONIG00000015021	rasef	99	81.944	Oreochromis_niloticus
ENSSMAG00000000942	rasef	99	47.882	ENSOANG00000010379	RASEF	99	48.395	Ornithorhynchus_anatinus
ENSSMAG00000000942	rasef	99	47.507	ENSOCUG00000001548	RASEF	99	47.786	Oryctolagus_cuniculus
ENSSMAG00000000942	rasef	99	76.912	ENSORLG00000005076	rasef	99	75.030	Oryzias_latipes
ENSSMAG00000000942	rasef	99	76.773	ENSORLG00020020049	rasef	99	74.789	Oryzias_latipes_hni
ENSSMAG00000000942	rasef	99	76.773	ENSORLG00015008479	rasef	99	74.789	Oryzias_latipes_hsok
ENSSMAG00000000942	rasef	99	78.164	ENSOMEG00000023457	rasef	99	80.058	Oryzias_melastigma
ENSSMAG00000000942	rasef	86	53.081	ENSOGAG00000012724	RASEF	99	52.923	Otolemur_garnettii
ENSSMAG00000000942	rasef	99	49.279	ENSOARG00000009073	RASEF	94	49.485	Ovis_aries
ENSSMAG00000000942	rasef	99	50.067	ENSPPAG00000042152	RASEF	99	50.472	Pan_paniscus
ENSSMAG00000000942	rasef	99	48.761	ENSPPRG00000008487	RASEF	99	49.673	Panthera_pardus
ENSSMAG00000000942	rasef	85	54.341	ENSPTIG00000006676	RASEF	91	52.874	Panthera_tigris_altaica
ENSSMAG00000000942	rasef	99	50.067	ENSPTRG00000021052	RASEF	99	50.472	Pan_troglodytes
ENSSMAG00000000942	rasef	99	48.240	ENSPANG00000024899	RASEF	99	48.892	Papio_anubis
ENSSMAG00000000942	rasef	83	52.529	ENSPSIG00000017699	RASEF	92	53.191	Pelodiscus_sinensis
ENSSMAG00000000942	rasef	87	78.571	ENSPMGG00000015499	rasef	94	78.571	Periophthalmus_magnuspinnatus
ENSSMAG00000000942	rasef	86	51.675	ENSPEMG00000002797	Rasef	99	51.515	Peromyscus_maniculatus_bairdii
ENSSMAG00000000942	rasef	77	46.667	ENSPMAG00000001634	rasef	98	46.667	Petromyzon_marinus
ENSSMAG00000000942	rasef	99	50.000	ENSPCIG00000027655	RASEF	99	52.308	Phascolarctos_cinereus
ENSSMAG00000000942	rasef	99	71.829	ENSPFOG00000018924	rasef	99	71.562	Poecilia_formosa
ENSSMAG00000000942	rasef	88	66.403	ENSPLAG00000022907	RASEF	99	66.086	Poecilia_latipinna
ENSSMAG00000000942	rasef	99	78.273	ENSPMEG00000006546	rasef	99	77.994	Poecilia_mexicana
ENSSMAG00000000942	rasef	99	77.747	ENSPREG00000018728	rasef	97	77.469	Poecilia_reticulata
ENSSMAG00000000942	rasef	99	48.758	ENSPPYG00000019320	RASEF	99	48.627	Pongo_abelii
ENSSMAG00000000942	rasef	99	49.157	ENSPCOG00000022979	RASEF	99	49.027	Propithecus_coquereli
ENSSMAG00000000942	rasef	96	50.134	ENSPVAG00000003682	RASEF	95	50.806	Pteropus_vampyrus
ENSSMAG00000000942	rasef	96	77.424	ENSPNYG00000010579	rasef	95	77.457	Pundamilia_nyererei
ENSSMAG00000000942	rasef	95	55.920	ENSPNAG00000016447	rasef	94	55.920	Pygocentrus_nattereri
ENSSMAG00000000942	rasef	99	49.393	ENSRNOG00000024190	Rasef	99	49.123	Rattus_norvegicus
ENSSMAG00000000942	rasef	99	49.349	ENSRBIG00000039516	RASEF	99	49.349	Rhinopithecus_bieti
ENSSMAG00000000942	rasef	94	50.681	ENSRROG00000044397	RASEF	99	50.681	Rhinopithecus_roxellana
ENSSMAG00000000942	rasef	99	47.718	ENSSBOG00000029298	RASEF	98	47.588	Saimiri_boliviensis_boliviensis
ENSSMAG00000000942	rasef	99	55.027	ENSSFOG00015009014	rasef	99	54.620	Scleropages_formosus
ENSSMAG00000000942	rasef	95	62.996	ENSSDUG00000022228	rasef	93	65.823	Seriola_dumerili
ENSSMAG00000000942	rasef	99	81.363	ENSSLDG00000001784	rasef	99	77.218	Seriola_lalandi_dorsalis
ENSSMAG00000000942	rasef	96	50.425	ENSSPUG00000002899	RASEF	95	50.283	Sphenodon_punctatus
ENSSMAG00000000942	rasef	99	82.434	ENSSPAG00000002442	rasef	96	82.573	Stegastes_partitus
ENSSMAG00000000942	rasef	88	53.323	ENSSSCG00000040707	-	93	53.168	Sus_scrofa
ENSSMAG00000000942	rasef	99	50.399	ENSTGUG00000003216	RASEF	99	50.266	Taeniopygia_guttata
ENSSMAG00000000942	rasef	100	77.947	ENSTRUG00000011541	rasef	100	77.947	Takifugu_rubripes
ENSSMAG00000000942	rasef	99	69.241	ENSTNIG00000006010	rasef	100	69.241	Tetraodon_nigroviridis
ENSSMAG00000000942	rasef	99	44.226	ENSTTRG00000002061	RASEF	99	44.928	Tursiops_truncatus
ENSSMAG00000000942	rasef	99	50.270	ENSUAMG00000021591	RASEF	99	50.000	Ursus_americanus
ENSSMAG00000000942	rasef	86	51.969	ENSUMAG00000004670	RASEF	94	51.811	Ursus_maritimus
ENSSMAG00000000942	rasef	83	54.215	ENSVVUG00000029736	RASEF	93	53.974	Vulpes_vulpes
ENSSMAG00000000942	rasef	96	49.586	ENSXETG00000016758	mgc147600	95	49.448	Xenopus_tropicalis
ENSSMAG00000000942	rasef	82	56.566	ENSXCOG00000005178	rasef	85	56.566	Xiphophorus_couchianus
ENSSMAG00000000942	rasef	99	78.025	ENSXMAG00000015129	rasef	99	77.747	Xiphophorus_maculatus