EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000001030 (Gene tree)
Gene ID: -
Gene Symbol: chd7
Alias: -
Full Name: chromodomain helicase DNA binding protein 7
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 51161 bases
Position: chr7:19297505-19348665
Accession: ZDB-GENE-070912-179
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000001705	BRK	PF07533.16	7.9e-22	1	1
ENSSMAP00000001725	BRK	PF07533.16	2.3e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000001760	-	2574	-	ENSSMAP00000001725	857 (aa)	-	-
ENSSMAT00000001741	-	4905	-	ENSSMAP00000001705	1634 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000001030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000001030's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000001030	chd7	87	64.639	ENSG00000171316	CHD7	97	64.516	Homo_sapiens
ENSSMAG00000001030	chd7	68	71.637	ENSACIG00000001590	chd7	51	70.751	Amphilophus_citrinellus
ENSSMAG00000001030	chd7	64	90.761	ENSAOCG00000002337	chd7	51	73.830	Amphiprion_ocellaris
ENSSMAG00000001030	chd7	89	90.217	ENSAPEG00000010332	chd7	50	83.756	Amphiprion_percula
ENSSMAG00000001030	chd7	68	76.955	ENSATEG00000002590	chd7	52	76.897	Anabas_testudineus
ENSSMAG00000001030	chd7	92	52.992	ENSACAG00000005760	CHD7	50	54.639	Anolis_carolinensis
ENSSMAG00000001030	chd7	95	54.756	ENSDARG00000075211	chd7	52	56.202	Danio_rerio
ENSSMAG00000001030	chd7	93	59.146	ENSELUG00000024442	chd7	53	61.712	Esox_lucius
ENSSMAG00000001030	chd7	97	89.744	ENSFHEG00000001311	chd7	52	78.078	Fundulus_heteroclitus
ENSSMAG00000001030	chd7	97	75.150	ENSHBUG00000019225	chd7	53	80.448	Haplochromis_burtoni
ENSSMAG00000001030	chd7	95	77.489	ENSHCOG00000014380	chd7	51	68.462	Hippocampus_comes
ENSSMAG00000001030	chd7	97	77.510	ENSLBEG00000020842	chd7	52	76.506	Labrus_bergylta
ENSSMAG00000001030	chd7	89	53.528	ENSLACG00000002461	CHD7	52	53.540	Latimeria_chalumnae
ENSSMAG00000001030	chd7	93	52.991	ENSLOCG00000005062	chd7	82	55.843	Lepisosteus_oculatus
ENSSMAG00000001030	chd7	97	74.749	ENSMZEG00005010646	chd7	52	80.299	Maylandia_zebra
ENSSMAG00000001030	chd7	100	65.627	ENSMMOG00000021538	-	96	69.584	Mola_mola
ENSSMAG00000001030	chd7	92	74.651	ENSORLG00000013492	chd7	50	77.811	Oryzias_latipes
ENSSMAG00000001030	chd7	93	51.213	ENSPCIG00000000025	-	69	54.270	Phascolarctos_cinereus
ENSSMAG00000001030	chd7	97	89.326	ENSPFOG00000004891	chd7	83	72.067	Poecilia_formosa
ENSSMAG00000001030	chd7	52	88.660	ENSSFOG00015015077	chd7	50	61.333	Scleropages_formosus
ENSSMAG00000001030	chd7	100	81.023	ENSSLDG00000022595	chd7	100	80.907	Seriola_lalandi_dorsalis