EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000001107 (Gene tree)
Gene ID: -
Gene Symbol: raly
Alias: zgc:103445
Full Name: RALY heterogeneous nuclear ribonucleoprotein
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 33711 bases
Position: chr6:1104313-1138023
Accession: ZDB-GENE-041010-127
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000001787	RRM_1	PF00076.22	2.4e-10	1	1
ENSSMAP00000001775	RRM_1	PF00076.22	3.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000001825	-	837	-	ENSSMAP00000001787	278 (aa)	-	-
ENSSMAT00000001814	-	4083	-	ENSSMAP00000001775	296 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000001107's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000001107's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000001107	raly	86	47.692	ENSSMAG00000011147	-	92	46.875
ENSSMAG00000001107	raly	70	51.628	ENSSMAG00000013592	-	91	43.253
ENSSMAG00000001107	raly	91	54.348	ENSSMAG00000015907	-	77	58.369
ENSSMAG00000001107	raly	89	52.330	ENSSMAG00000005608	-	90	53.232

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000001107	raly	72	74.884	ENSG00000125970	RALY	100	87.640	Homo_sapiens
ENSSMAG00000001107	raly	99	77.778	ENSAPOG00000001026	raly	99	77.778	Acanthochromis_polyacanthus
ENSSMAG00000001107	raly	95	60.458	ENSAMEG00000009050	RALY	73	72.566	Ailuropoda_melanoleuca
ENSSMAG00000001107	raly	75	91.441	ENSACIG00000024288	raly	86	91.441	Amphilophus_citrinellus
ENSSMAG00000001107	raly	95	80.565	ENSAOCG00000009883	raly	85	80.565	Amphiprion_ocellaris
ENSSMAG00000001107	raly	95	81.272	ENSAPEG00000024106	raly	86	81.272	Amphiprion_percula
ENSSMAG00000001107	raly	95	79.402	ENSATEG00000004870	raly	96	80.731	Anabas_testudineus
ENSSMAG00000001107	raly	91	67.286	ENSAPLG00000012983	RALY	85	71.311	Anas_platyrhynchos
ENSSMAG00000001107	raly	95	66.192	ENSACAG00000008983	RALY	75	71.311	Anolis_carolinensis
ENSSMAG00000001107	raly	72	74.419	ENSANAG00000019376	RALY	72	71.818	Aotus_nancymaae
ENSSMAG00000001107	raly	98	83.333	ENSACLG00000007561	raly	87	85.263	Astatotilapia_calliptera
ENSSMAG00000001107	raly	93	56.478	ENSBTAG00000016524	RALY	77	72.477	Bos_taurus
ENSSMAG00000001107	raly	72	74.419	ENSCJAG00000018361	-	70	71.818	Callithrix_jacchus
ENSSMAG00000001107	raly	67	73.846	ENSCJAG00000009449	-	67	73.333	Callithrix_jacchus
ENSSMAG00000001107	raly	95	62.799	ENSCAFG00000007490	RALY	82	68.313	Canis_familiaris
ENSSMAG00000001107	raly	95	62.799	ENSCAFG00020005069	RALY	82	68.313	Canis_lupus_dingo
ENSSMAG00000001107	raly	95	61.184	ENSCHIG00000026609	RALY	73	74.091	Capra_hircus
ENSSMAG00000001107	raly	93	60.417	ENSTSYG00000002598	RALY	85	64.822	Carlito_syrichta
ENSSMAG00000001107	raly	90	56.115	ENSCAPG00000008110	RALY	94	69.697	Cavia_aperea
ENSSMAG00000001107	raly	95	58.307	ENSCPOG00000000309	RALY	94	75.253	Cavia_porcellus
ENSSMAG00000001107	raly	72	74.419	ENSCCAG00000024548	RALY	72	71.818	Cebus_capucinus
ENSSMAG00000001107	raly	72	74.419	ENSCATG00000031769	RALY	74	67.431	Cercocebus_atys
ENSSMAG00000001107	raly	73	74.091	ENSCLAG00000016899	RALY	76	67.769	Chinchilla_lanigera
ENSSMAG00000001107	raly	72	74.419	ENSCSAG00000012199	RALY	76	66.255	Chlorocebus_sabaeus
ENSSMAG00000001107	raly	73	67.273	ENSCHOG00000000266	RALY	100	58.798	Choloepus_hoffmanni
ENSSMAG00000001107	raly	93	68.345	ENSCPBG00000019164	RALY	90	72.653	Chrysemys_picta_bellii
ENSSMAG00000001107	raly	72	74.419	ENSCANG00000037952	RALY	72	71.818	Colobus_angolensis_palliatus
ENSSMAG00000001107	raly	73	73.636	ENSCGRG00001014652	Raly	66	75.758	Cricetulus_griseus_chok1gshd
ENSSMAG00000001107	raly	73	73.636	ENSCGRG00000011726	Raly	66	75.758	Cricetulus_griseus_crigri
ENSSMAG00000001107	raly	91	75.373	ENSDARG00000059972	raly	88	79.918	Danio_rerio
ENSSMAG00000001107	raly	95	57.732	ENSDNOG00000046782	-	79	70.183	Dasypus_novemcinctus
ENSSMAG00000001107	raly	94	61.786	ENSDNOG00000003227	-	88	65.462	Dasypus_novemcinctus
ENSSMAG00000001107	raly	68	75.758	ENSDORG00000013400	Raly	94	75.253	Dipodomys_ordii
ENSSMAG00000001107	raly	73	63.636	ENSETEG00000012464	-	99	62.727	Echinops_telfairi
ENSSMAG00000001107	raly	65	59.184	ENSETEG00000001919	-	63	59.686	Echinops_telfairi
ENSSMAG00000001107	raly	95	61.538	ENSEASG00005008501	RALY	77	72.018	Equus_asinus_asinus
ENSSMAG00000001107	raly	95	61.538	ENSECAG00000012357	RALY	78	69.547	Equus_caballus
ENSSMAG00000001107	raly	95	61.538	ENSECAG00000037642	-	78	69.547	Equus_caballus
ENSSMAG00000001107	raly	95	61.538	ENSECAG00000030217	-	78	69.547	Equus_caballus
ENSSMAG00000001107	raly	73	62.100	ENSEEUG00000005356	RALY	78	56.198	Erinaceus_europaeus
ENSSMAG00000001107	raly	92	72.318	ENSELUG00000011138	raly	90	74.627	Esox_lucius
ENSSMAG00000001107	raly	95	61.953	ENSFCAG00000025252	RALY	80	68.313	Felis_catus
ENSSMAG00000001107	raly	73	71.818	ENSFDAG00000010175	RALY	100	89.412	Fukomys_damarensis
ENSSMAG00000001107	raly	75	87.387	ENSFHEG00000018618	raly	84	87.387	Fundulus_heteroclitus
ENSSMAG00000001107	raly	75	67.421	ENSGMOG00000012589	raly	100	67.421	Gadus_morhua
ENSSMAG00000001107	raly	97	65.972	ENSGALG00000033696	RALY	90	72.131	Gallus_gallus
ENSSMAG00000001107	raly	95	70.629	ENSGACG00000003636	raly	97	72.028	Gasterosteus_aculeatus
ENSSMAG00000001107	raly	82	72.653	ENSGAGG00000016266	RALY	75	72.653	Gopherus_agassizii
ENSSMAG00000001107	raly	72	74.419	ENSGGOG00000022709	RALY	75	68.203	Gorilla_gorilla
ENSSMAG00000001107	raly	96	71.656	ENSHBUG00000021321	raly	99	74.914	Haplochromis_burtoni
ENSSMAG00000001107	raly	73	73.636	ENSHGLG00000017779	-	94	75.253	Heterocephalus_glaber_female
ENSSMAG00000001107	raly	68	70.202	ENSHGLG00000021175	-	69	69.192	Heterocephalus_glaber_female
ENSSMAG00000001107	raly	90	46.840	ENSHGLG00100000278	-	76	56.122	Heterocephalus_glaber_male
ENSSMAG00000001107	raly	95	46.392	ENSHGLG00100003829	-	70	56.061	Heterocephalus_glaber_male
ENSSMAG00000001107	raly	73	73.636	ENSHGLG00100003933	RALY	100	74.522	Heterocephalus_glaber_male
ENSSMAG00000001107	raly	80	54.622	ENSHCOG00000012268	raly	96	56.502	Hippocampus_comes
ENSSMAG00000001107	raly	95	59.807	ENSSTOG00000008810	RALY	71	73.636	Ictidomys_tridecemlineatus
ENSSMAG00000001107	raly	68	76.768	ENSJJAG00000008473	Raly	100	73.248	Jaculus_jaculus
ENSSMAG00000001107	raly	68	88.832	ENSKMAG00000015656	raly	80	88.832	Kryptolebias_marmoratus
ENSSMAG00000001107	raly	75	91.855	ENSLBEG00000022656	raly	85	91.855	Labrus_bergylta
ENSSMAG00000001107	raly	93	67.500	ENSLACG00000008596	RALY	91	67.803	Latimeria_chalumnae
ENSSMAG00000001107	raly	97	72.569	ENSLOCG00000007219	raly	99	71.088	Lepisosteus_oculatus
ENSSMAG00000001107	raly	95	59.744	ENSLAFG00000000321	RALY	69	74.545	Loxodonta_africana
ENSSMAG00000001107	raly	72	74.884	ENSMFAG00000033131	RALY	70	72.273	Macaca_fascicularis
ENSSMAG00000001107	raly	72	74.884	ENSMMUG00000018093	RALY	70	72.273	Macaca_mulatta
ENSSMAG00000001107	raly	72	74.884	ENSMNEG00000044988	RALY	75	68.203	Macaca_nemestrina
ENSSMAG00000001107	raly	72	74.419	ENSMLEG00000028900	RALY	70	71.818	Mandrillus_leucophaeus
ENSSMAG00000001107	raly	95	76.207	ENSMAMG00000012529	raly	88	76.552	Mastacembelus_armatus
ENSSMAG00000001107	raly	96	68.712	ENSMZEG00005016550	raly	99	72.937	Maylandia_zebra
ENSSMAG00000001107	raly	94	61.716	ENSMGAG00000002214	RALY	73	75.893	Meleagris_gallopavo
ENSSMAG00000001107	raly	68	76.263	ENSMAUG00000005739	Raly	94	75.758	Mesocricetus_auratus
ENSSMAG00000001107	raly	95	62.290	ENSMICG00000039074	RALY	77	72.477	Microcebus_murinus
ENSSMAG00000001107	raly	73	73.636	ENSMOCG00000009450	Raly	75	67.355	Microtus_ochrogaster
ENSSMAG00000001107	raly	74	92.237	ENSMMOG00000013788	raly	84	92.237	Mola_mola
ENSSMAG00000001107	raly	94	60.279	ENSMODG00000002819	-	87	65.613	Monodelphis_domestica
ENSSMAG00000001107	raly	100	84.615	ENSMALG00000007071	raly	75	85.284	Monopterus_albus
ENSSMAG00000001107	raly	73	73.182	MGP_CAROLIEiJ_G0024519	Raly	100	74.522	Mus_caroli
ENSSMAG00000001107	raly	73	73.636	ENSMUSG00000027593	Raly	100	74.522	Mus_musculus
ENSSMAG00000001107	raly	73	73.636	MGP_PahariEiJ_G0025963	Raly	100	74.522	Mus_pahari
ENSSMAG00000001107	raly	73	73.636	MGP_SPRETEiJ_G0025441	Raly	100	74.522	Mus_spretus
ENSSMAG00000001107	raly	95	62.799	ENSMPUG00000017820	RALY	82	68.313	Mustela_putorius_furo
ENSSMAG00000001107	raly	93	62.712	ENSMLUG00000005330	-	82	68.724	Myotis_lucifugus
ENSSMAG00000001107	raly	93	56.228	ENSMLUG00000027895	-	88	56.654	Myotis_lucifugus
ENSSMAG00000001107	raly	68	76.263	ENSNGAG00000001263	Raly	94	75.758	Nannospalax_galili
ENSSMAG00000001107	raly	96	71.975	ENSNBRG00000014761	raly	99	75.258	Neolamprologus_brichardi
ENSSMAG00000001107	raly	81	55.328	ENSNLEG00000010031	-	68	62.222	Nomascus_leucogenys
ENSSMAG00000001107	raly	74	72.197	ENSOPRG00000008423	RALY	78	66.667	Ochotona_princeps
ENSSMAG00000001107	raly	58	60.234	ENSODEG00000011160	-	70	59.649	Octodon_degus
ENSSMAG00000001107	raly	73	70.000	ENSODEG00000008369	-	79	64.198	Octodon_degus
ENSSMAG00000001107	raly	67	65.482	ENSODEG00000012831	-	100	64.975	Octodon_degus
ENSSMAG00000001107	raly	100	83.946	ENSONIG00000004416	raly	100	83.946	Oreochromis_niloticus
ENSSMAG00000001107	raly	73	74.091	ENSOCUG00000000477	RALY	65	67.490	Oryctolagus_cuniculus
ENSSMAG00000001107	raly	72	76.037	ENSOGAG00000032337	RALY	72	71.304	Otolemur_garnettii
ENSSMAG00000001107	raly	93	61.204	ENSOARG00000008957	RALY	73	74.091	Ovis_aries
ENSSMAG00000001107	raly	72	74.419	ENSPPAG00000034951	RALY	71	71.818	Pan_paniscus
ENSSMAG00000001107	raly	95	61.953	ENSPPRG00000014593	RALY	80	68.313	Panthera_pardus
ENSSMAG00000001107	raly	95	61.953	ENSPTIG00000021910	RALY	80	68.313	Panthera_tigris_altaica
ENSSMAG00000001107	raly	72	74.419	ENSPTRG00000013410	RALY	75	67.742	Pan_troglodytes
ENSSMAG00000001107	raly	72	74.419	ENSPANG00000018093	RALY	70	71.818	Papio_anubis
ENSSMAG00000001107	raly	97	73.264	ENSPKIG00000004894	raly	99	71.622	Paramormyrops_kingsleyae
ENSSMAG00000001107	raly	82	64.062	ENSPSIG00000017714	RALY	87	64.062	Pelodiscus_sinensis
ENSSMAG00000001107	raly	68	76.263	ENSPEMG00000021466	Raly	76	70.046	Peromyscus_maniculatus_bairdii
ENSSMAG00000001107	raly	94	63.309	ENSPCIG00000011153	-	86	69.262	Phascolarctos_cinereus
ENSSMAG00000001107	raly	72	74.419	ENSPPYG00000010932	RALY	71	71.818	Pongo_abelii
ENSSMAG00000001107	raly	73	63.636	ENSPCAG00000016867	RALY	78	61.538	Procavia_capensis
ENSSMAG00000001107	raly	95	61.616	ENSPCOG00000016363	RALY	77	72.222	Propithecus_coquereli
ENSSMAG00000001107	raly	93	62.500	ENSPVAG00000015827	RALY	82	67.901	Pteropus_vampyrus
ENSSMAG00000001107	raly	90	73.826	ENSPNYG00000011247	raly	99	73.826	Pundamilia_nyererei
ENSSMAG00000001107	raly	91	72.222	ENSPNAG00000011812	raly	89	74.603	Pygocentrus_nattereri
ENSSMAG00000001107	raly	73	73.182	ENSRNOG00000017405	Raly	77	66.942	Rattus_norvegicus
ENSSMAG00000001107	raly	72	74.419	ENSRBIG00000030203	RALY	72	69.130	Rhinopithecus_bieti
ENSSMAG00000001107	raly	72	74.419	ENSRROG00000038781	RALY	72	69.130	Rhinopithecus_roxellana
ENSSMAG00000001107	raly	72	74.884	ENSSBOG00000001418	RALY	70	72.273	Saimiri_boliviensis_boliviensis
ENSSMAG00000001107	raly	68	76.410	ENSSHAG00000016830	RALY	68	76.410	Sarcophilus_harrisii
ENSSMAG00000001107	raly	90	76.119	ENSSFOG00015012304	raly	94	78.571	Scleropages_formosus
ENSSMAG00000001107	raly	100	84.000	ENSSDUG00000002411	raly	100	85.000	Seriola_dumerili
ENSSMAG00000001107	raly	96	82.699	ENSSLDG00000017872	raly	95	83.737	Seriola_lalandi_dorsalis
ENSSMAG00000001107	raly	72	60.465	ENSSARG00000002763	-	69	60.664	Sorex_araneus
ENSSMAG00000001107	raly	91	68.889	ENSSPUG00000006251	RALY	96	69.444	Sphenodon_punctatus
ENSSMAG00000001107	raly	60	93.258	ENSSPAG00000022480	-	71	93.258	Stegastes_partitus
ENSSMAG00000001107	raly	73	75.455	ENSSSCG00000007275	RALY	70	72.018	Sus_scrofa
ENSSMAG00000001107	raly	73	77.064	ENSTGUG00000003715	RALY	100	77.064	Taeniopygia_guttata
ENSSMAG00000001107	raly	73	60.000	ENSTBEG00000009812	RALY	77	54.733	Tupaia_belangeri
ENSSMAG00000001107	raly	72	74.654	ENSTTRG00000006590	RALY	71	73.733	Tursiops_truncatus
ENSSMAG00000001107	raly	92	61.986	ENSUAMG00000006993	RALY	83	68.313	Ursus_americanus
ENSSMAG00000001107	raly	97	61.168	ENSUMAG00000024106	RALY	82	68.313	Ursus_maritimus
ENSSMAG00000001107	raly	57	73.256	ENSVPAG00000000373	RALY	58	72.093	Vicugna_pacos
ENSSMAG00000001107	raly	95	62.799	ENSVVUG00000004546	RALY	82	68.313	Vulpes_vulpes
ENSSMAG00000001107	raly	91	62.105	ENSXETG00000019514	raly	89	66.154	Xenopus_tropicalis