EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000001120 (Gene tree)
Gene ID: -
Gene Symbol: blm
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 9945 bases
Position: chr10:12866408-12876352
Accession: ZDB-GENE-070702-5
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000001780	HRDC	PF00570.23	5.1e-16	1	1
ENSSMAP00000001780	BDHCT	PF08072.11	3.2e-16	1	1
ENSSMAP00000001780	DEAD	PF00270.29	4.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000001817	-	5418	-	ENSSMAP00000001780	1372 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000001120's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000001120's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000001120	blm	76	53.747	ENSG00000197299	BLM	66	65.052	Homo_sapiens
ENSSMAG00000001120	blm	100	74.294	ENSAPOG00000017966	blm	100	74.294	Acanthochromis_polyacanthus
ENSSMAG00000001120	blm	57	64.803	ENSAMEG00000013843	BLM	55	64.586	Ailuropoda_melanoleuca
ENSSMAG00000001120	blm	100	72.491	ENSACIG00000023762	blm	100	72.140	Amphilophus_citrinellus
ENSSMAG00000001120	blm	100	75.578	ENSAOCG00000003318	blm	100	75.506	Amphiprion_ocellaris
ENSSMAG00000001120	blm	100	73.762	ENSAPEG00000018105	blm	100	73.692	Amphiprion_percula
ENSSMAG00000001120	blm	99	77.475	ENSATEG00000006421	blm	100	77.475	Anabas_testudineus
ENSSMAG00000001120	blm	81	51.224	ENSAPLG00000006878	BLM	82	60.829	Anas_platyrhynchos
ENSSMAG00000001120	blm	76	54.237	ENSACAG00000014275	BLM	84	64.015	Anolis_carolinensis
ENSSMAG00000001120	blm	100	72.670	ENSACLG00000020354	blm	100	71.947	Astatotilapia_calliptera
ENSSMAG00000001120	blm	99	56.690	ENSAMXG00000016970	blm	99	56.104	Astyanax_mexicanus
ENSSMAG00000001120	blm	59	70.439	ENSBTAG00000020301	BLM	68	70.439	Bos_taurus
ENSSMAG00000001120	blm	99	45.933	ENSCJAG00000009803	BLM	54	73.770	Callithrix_jacchus
ENSSMAG00000001120	blm	86	56.250	ENSCAFG00000012385	BLM	85	56.250	Canis_familiaris
ENSSMAG00000001120	blm	86	56.250	ENSCAFG00020016111	BLM	87	67.586	Canis_lupus_dingo
ENSSMAG00000001120	blm	54	69.352	ENSCAPG00000017976	BLM	69	69.352	Cavia_aperea
ENSSMAG00000001120	blm	81	50.475	ENSCPOG00000001761	BLM	59	61.649	Cavia_porcellus
ENSSMAG00000001120	blm	68	65.394	ENSCATG00000040609	BLM	75	76.066	Cercocebus_atys
ENSSMAG00000001120	blm	60	62.932	ENSCLAG00000012111	BLM	59	62.485	Chinchilla_lanigera
ENSSMAG00000001120	blm	68	65.179	ENSCSAG00000017040	BLM	68	65.438	Chlorocebus_sabaeus
ENSSMAG00000001120	blm	51	59.722	ENSCHOG00000006255	BLM	50	59.722	Choloepus_hoffmanni
ENSSMAG00000001120	blm	83	53.351	ENSCPBG00000025000	BLM	99	52.609	Chrysemys_picta_bellii
ENSSMAG00000001120	blm	60	62.574	ENSCGRG00001024897	Blm	60	62.338	Cricetulus_griseus_chok1gshd
ENSSMAG00000001120	blm	95	70.513	ENSCSEG00000013483	blm	99	69.910	Cynoglossus_semilaevis
ENSSMAG00000001120	blm	76	70.539	ENSCVAG00000017583	blm	92	78.125	Cyprinodon_variegatus
ENSSMAG00000001120	blm	99	56.585	ENSDARG00000077089	blm	100	56.747	Danio_rerio
ENSSMAG00000001120	blm	89	56.250	ENSDNOG00000010159	BLM	58	65.102	Dasypus_novemcinctus
ENSSMAG00000001120	blm	60	63.919	ENSDORG00000011033	Blm	99	54.597	Dipodomys_ordii
ENSSMAG00000001120	blm	52	60.000	ENSETEG00000015019	BLM	50	60.000	Echinops_telfairi
ENSSMAG00000001120	blm	72	44.970	ENSEASG00005006727	BLM	53	55.696	Equus_asinus_asinus
ENSSMAG00000001120	blm	81	48.969	ENSECAG00000011405	BLM	58	58.657	Equus_caballus
ENSSMAG00000001120	blm	79	64.051	ENSEEUG00000001434	BLM	65	63.452	Erinaceus_europaeus
ENSSMAG00000001120	blm	99	58.271	ENSELUG00000019098	blm	99	57.827	Esox_lucius
ENSSMAG00000001120	blm	84	65.355	ENSFCAG00000006087	BLM	60	72.951	Felis_catus
ENSSMAG00000001120	blm	62	60.412	ENSFALG00000010981	BLM	76	61.928	Ficedula_albicollis
ENSSMAG00000001120	blm	54	65.888	ENSFDAG00000012658	BLM	55	65.888	Fukomys_damarensis
ENSSMAG00000001120	blm	100	69.099	ENSFHEG00000002553	blm	100	69.550	Fundulus_heteroclitus
ENSSMAG00000001120	blm	99	59.437	ENSGMOG00000016431	blm	98	68.807	Gadus_morhua
ENSSMAG00000001120	blm	100	69.484	ENSGAFG00000001117	blm	100	69.484	Gambusia_affinis
ENSSMAG00000001120	blm	99	70.365	ENSGACG00000010863	blm	100	88.447	Gasterosteus_aculeatus
ENSSMAG00000001120	blm	58	62.763	ENSGAGG00000005383	BLM	84	62.434	Gopherus_agassizii
ENSSMAG00000001120	blm	57	65.689	ENSGGOG00000007710	BLM	75	75.410	Gorilla_gorilla
ENSSMAG00000001120	blm	100	74.767	ENSHBUG00000015943	blm	100	74.337	Haplochromis_burtoni
ENSSMAG00000001120	blm	76	52.887	ENSHGLG00000013231	BLM	63	65.031	Heterocephalus_glaber_female
ENSSMAG00000001120	blm	76	68.762	ENSHCOG00000011455	blm	100	68.446	Hippocampus_comes
ENSSMAG00000001120	blm	79	61.116	ENSIPUG00000000529	blm	79	70.225	Ictalurus_punctatus
ENSSMAG00000001120	blm	67	65.565	ENSSTOG00000005000	BLM	67	64.841	Ictidomys_tridecemlineatus
ENSSMAG00000001120	blm	100	72.890	ENSKMAG00000016608	blm	100	72.532	Kryptolebias_marmoratus
ENSSMAG00000001120	blm	60	82.233	ENSLBEG00000018729	blm	96	82.403	Labrus_bergylta
ENSSMAG00000001120	blm	61	65.157	ENSLACG00000006490	BLM	79	53.288	Latimeria_chalumnae
ENSSMAG00000001120	blm	99	52.503	ENSLOCG00000014302	blm	66	68.706	Lepisosteus_oculatus
ENSSMAG00000001120	blm	57	65.267	ENSMFAG00000042982	BLM	75	75.738	Macaca_fascicularis
ENSSMAG00000001120	blm	74	73.156	ENSMMUG00000019526	BLM	75	75.738	Macaca_mulatta
ENSSMAG00000001120	blm	57	65.267	ENSMNEG00000031251	BLM	75	75.738	Macaca_nemestrina
ENSSMAG00000001120	blm	84	61.529	ENSMLEG00000032934	BLM	59	61.959	Mandrillus_leucophaeus
ENSSMAG00000001120	blm	99	75.451	ENSMAMG00000008726	blm	99	75.451	Mastacembelus_armatus
ENSSMAG00000001120	blm	100	71.709	ENSMZEG00005022323	blm	100	71.060	Maylandia_zebra
ENSSMAG00000001120	blm	84	62.791	ENSMICG00000034442	BLM	83	62.791	Microcebus_murinus
ENSSMAG00000001120	blm	87	62.901	ENSMOCG00000016367	Blm	68	63.020	Microtus_ochrogaster
ENSSMAG00000001120	blm	100	74.122	ENSMMOG00000006959	blm	100	74.140	Mola_mola
ENSSMAG00000001120	blm	72	62.326	ENSMODG00000019449	BLM	67	62.209	Monodelphis_domestica
ENSSMAG00000001120	blm	100	77.077	ENSMALG00000007323	blm	100	76.703	Monopterus_albus
ENSSMAG00000001120	blm	60	61.927	MGP_CAROLIEiJ_G0029907	Blm	59	61.484	Mus_caroli
ENSSMAG00000001120	blm	99	46.091	ENSMUSG00000030528	Blm	59	61.229	Mus_musculus
ENSSMAG00000001120	blm	60	61.720	MGP_PahariEiJ_G0013129	Blm	59	61.720	Mus_pahari
ENSSMAG00000001120	blm	60	61.960	MGP_SPRETEiJ_G0031009	Blm	59	61.584	Mus_spretus
ENSSMAG00000001120	blm	99	45.102	ENSMLUG00000014697	BLM	60	61.313	Myotis_lucifugus
ENSSMAG00000001120	blm	86	62.919	ENSNGAG00000001275	Blm	62	62.230	Nannospalax_galili
ENSSMAG00000001120	blm	100	71.689	ENSNBRG00000019702	blm	100	71.619	Neolamprologus_brichardi
ENSSMAG00000001120	blm	84	63.265	ENSNLEG00000012087	BLM	74	61.168	Nomascus_leucogenys
ENSSMAG00000001120	blm	53	65.247	ENSOPRG00000011667	BLM	61	64.698	Ochotona_princeps
ENSSMAG00000001120	blm	76	50.750	ENSODEG00000015373	BLM	99	50.758	Octodon_degus
ENSSMAG00000001120	blm	100	69.294	ENSONIG00000015193	blm	100	69.511	Oreochromis_niloticus
ENSSMAG00000001120	blm	56	66.023	ENSOANG00000009316	-	100	65.633	Ornithorhynchus_anatinus
ENSSMAG00000001120	blm	99	45.831	ENSOCUG00000013969	BLM	86	50.512	Oryctolagus_cuniculus
ENSSMAG00000001120	blm	100	72.330	ENSORLG00000008110	blm	100	72.115	Oryzias_latipes
ENSSMAG00000001120	blm	100	72.186	ENSORLG00020004812	blm	100	71.971	Oryzias_latipes_hni
ENSSMAG00000001120	blm	100	72.330	ENSORLG00015018640	blm	100	74.571	Oryzias_latipes_hsok
ENSSMAG00000001120	blm	100	71.459	ENSOMEG00000023545	blm	100	71.173	Oryzias_melastigma
ENSSMAG00000001120	blm	83	48.805	ENSOGAG00000005708	BLM	60	59.767	Otolemur_garnettii
ENSSMAG00000001120	blm	99	46.227	ENSOARG00000012875	BLM	59	61.647	Ovis_aries
ENSSMAG00000001120	blm	60	65.434	ENSPPAG00000032173	BLM	56	73.361	Pan_paniscus
ENSSMAG00000001120	blm	68	65.228	ENSPPRG00000002471	BLM	63	72.951	Panthera_pardus
ENSSMAG00000001120	blm	60	64.467	ENSPTIG00000016168	BLM	54	72.505	Panthera_tigris_altaica
ENSSMAG00000001120	blm	79	62.791	ENSPTRG00000007460	BLM	71	64.533	Pan_troglodytes
ENSSMAG00000001120	blm	65	65.140	ENSPANG00000018572	BLM	75	75.738	Papio_anubis
ENSSMAG00000001120	blm	89	73.467	ENSPKIG00000008954	blm	88	73.018	Paramormyrops_kingsleyae
ENSSMAG00000001120	blm	72	69.130	ENSPMGG00000006629	blm	100	69.231	Periophthalmus_magnuspinnatus
ENSSMAG00000001120	blm	68	62.692	ENSPEMG00000017348	Blm	70	62.692	Peromyscus_maniculatus_bairdii
ENSSMAG00000001120	blm	99	46.216	ENSPCIG00000006609	BLM	69	61.672	Phascolarctos_cinereus
ENSSMAG00000001120	blm	100	68.750	ENSPFOG00000005059	blm	100	68.750	Poecilia_formosa
ENSSMAG00000001120	blm	100	68.534	ENSPLAG00000017344	blm	100	68.508	Poecilia_latipinna
ENSSMAG00000001120	blm	100	68.822	ENSPMEG00000000321	blm	100	68.822	Poecilia_mexicana
ENSSMAG00000001120	blm	100	68.651	ENSPREG00000007715	blm	100	68.674	Poecilia_reticulata
ENSSMAG00000001120	blm	84	64.413	ENSPPYG00000006784	BLM	58	64.249	Pongo_abelii
ENSSMAG00000001120	blm	60	61.171	ENSPCAG00000008960	BLM	59	60.766	Procavia_capensis
ENSSMAG00000001120	blm	84	62.791	ENSPCOG00000000439	BLM	56	62.791	Propithecus_coquereli
ENSSMAG00000001120	blm	71	75.082	ENSPVAG00000011642	BLM	60	75.082	Pteropus_vampyrus
ENSSMAG00000001120	blm	91	84.588	ENSPNYG00000010956	blm	95	83.713	Pundamilia_nyererei
ENSSMAG00000001120	blm	100	58.795	ENSPNAG00000011714	blm	100	58.489	Pygocentrus_nattereri
ENSSMAG00000001120	blm	99	46.448	ENSRNOG00000011213	Blm	63	62.156	Rattus_norvegicus
ENSSMAG00000001120	blm	84	65.443	ENSRBIG00000029656	BLM	82	72.449	Rhinopithecus_bieti
ENSSMAG00000001120	blm	84	65.443	ENSRROG00000037871	BLM	76	75.244	Rhinopithecus_roxellana
ENSSMAG00000001120	blm	51	72.746	ENSSBOG00000030957	BLM	54	72.746	Saimiri_boliviensis_boliviensis
ENSSMAG00000001120	blm	64	71.981	ENSSFOG00015015462	blm	72	71.731	Scleropages_formosus
ENSSMAG00000001120	blm	100	80.500	ENSSDUG00000010955	blm	100	80.500	Seriola_dumerili
ENSSMAG00000001120	blm	100	80.129	ENSSLDG00000000634	blm	100	80.129	Seriola_lalandi_dorsalis
ENSSMAG00000001120	blm	76	49.586	ENSSARG00000006398	BLM	59	60.610	Sorex_araneus
ENSSMAG00000001120	blm	81	51.167	ENSSPUG00000000013	BLM	97	50.870	Sphenodon_punctatus
ENSSMAG00000001120	blm	99	75.442	ENSSPAG00000013999	blm	99	75.442	Stegastes_partitus
ENSSMAG00000001120	blm	64	65.621	ENSSSCG00000001816	BLM	65	64.979	Sus_scrofa
ENSSMAG00000001120	blm	71	53.675	ENSTGUG00000009959	-	83	55.423	Taeniopygia_guttata
ENSSMAG00000001120	blm	99	70.130	ENSTRUG00000019860	blm	99	70.274	Takifugu_rubripes
ENSSMAG00000001120	blm	99	65.678	ENSTNIG00000019246	blm	99	64.947	Tetraodon_nigroviridis
ENSSMAG00000001120	blm	57	65.522	ENSTTRG00000016386	BLM	55	64.885	Tursiops_truncatus
ENSSMAG00000001120	blm	83	51.217	ENSUMAG00000009105	BLM	96	67.906	Ursus_maritimus
ENSSMAG00000001120	blm	57	61.977	ENSVPAG00000000085	BLM	55	61.450	Vicugna_pacos
ENSSMAG00000001120	blm	86	56.250	ENSVVUG00000006402	BLM	55	77.507	Vulpes_vulpes
ENSSMAG00000001120	blm	99	47.051	ENSXETG00000007847	blm	55	65.823	Xenopus_tropicalis
ENSSMAG00000001120	blm	100	65.895	ENSXCOG00000020227	blm	100	65.684	Xiphophorus_couchianus
ENSSMAG00000001120	blm	100	69.269	ENSXMAG00000002951	blm	100	68.911	Xiphophorus_maculatus