EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000001213 (Gene tree)
Gene ID: -
Gene Symbol: frg1
Alias: zgc:112426
Full Name: FSHD region gene 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 8307 bases
Position: chr8:5424043-5432349
Accession: ZDB-GENE-050417-324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000001930	FRG1	PF06229.12	8.3e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000001969	-	1097	-	ENSSMAP00000001930	255 (aa)	-	A0A2U9BPR6

Gene Model

Click here to download ENSSMAG00000001213's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000001213's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000001213	frg1	100	68.992	ENSG00000109536	FRG1	100	80.172	Homo_sapiens
ENSSMAG00000001213	frg1	100	85.490	ENSAPOG00000001060	frg1	100	85.490	Acanthochromis_polyacanthus
ENSSMAG00000001213	frg1	100	68.217	ENSAMEG00000013503	FRG1	100	68.605	Ailuropoda_melanoleuca
ENSSMAG00000001213	frg1	87	87.387	ENSACIG00000022283	frg1	100	87.387	Amphilophus_citrinellus
ENSSMAG00000001213	frg1	87	86.099	ENSAOCG00000024240	frg1	88	84.956	Amphiprion_ocellaris
ENSSMAG00000001213	frg1	100	85.490	ENSAPEG00000002486	frg1	100	85.490	Amphiprion_percula
ENSSMAG00000001213	frg1	100	85.882	ENSATEG00000010414	frg1	100	85.882	Anabas_testudineus
ENSSMAG00000001213	frg1	100	69.531	ENSAPLG00000007785	-	100	69.531	Anas_platyrhynchos
ENSSMAG00000001213	frg1	100	70.312	ENSACAG00000006877	-	100	70.312	Anolis_carolinensis
ENSSMAG00000001213	frg1	100	70.817	ENSANAG00000020876	FRG1	100	70.039	Aotus_nancymaae
ENSSMAG00000001213	frg1	100	78.431	ENSACLG00000027065	frg1	100	78.039	Astatotilapia_calliptera
ENSSMAG00000001213	frg1	100	80.078	ENSAMXG00000032700	frg1	100	80.078	Astyanax_mexicanus
ENSSMAG00000001213	frg1	100	68.217	ENSBTAG00000007089	FRG1	100	68.605	Bos_taurus
ENSSMAG00000001213	frg1	85	40.773	WBGene00014177	frg-1	89	40.164	Caenorhabditis_elegans
ENSSMAG00000001213	frg1	100	70.817	ENSCJAG00000011272	FRG1	100	70.039	Callithrix_jacchus
ENSSMAG00000001213	frg1	100	68.217	ENSCAFG00000007135	FRG1	100	68.605	Canis_familiaris
ENSSMAG00000001213	frg1	83	74.057	ENSCAFG00020000082	-	85	74.057	Canis_lupus_dingo
ENSSMAG00000001213	frg1	100	68.217	ENSCHIG00000011585	-	100	68.605	Capra_hircus
ENSSMAG00000001213	frg1	98	49.600	ENSTSYG00000031599	-	89	48.684	Carlito_syrichta
ENSSMAG00000001213	frg1	87	71.749	ENSCAPG00000016056	-	91	71.749	Cavia_aperea
ENSSMAG00000001213	frg1	100	69.650	ENSCPOG00000022277	-	100	70.428	Cavia_porcellus
ENSSMAG00000001213	frg1	100	70.817	ENSCCAG00000024627	FRG1	100	70.039	Cebus_capucinus
ENSSMAG00000001213	frg1	100	68.605	ENSCATG00000029230	FRG1	100	68.217	Cercocebus_atys
ENSSMAG00000001213	frg1	99	50.198	ENSCLAG00000009263	-	84	51.598	Chinchilla_lanigera
ENSSMAG00000001213	frg1	100	69.650	ENSCLAG00000000370	-	100	70.428	Chinchilla_lanigera
ENSSMAG00000001213	frg1	100	56.977	ENSCLAG00000004960	-	100	58.140	Chinchilla_lanigera
ENSSMAG00000001213	frg1	100	50.980	ENSCLAG00000006068	-	100	50.980	Chinchilla_lanigera
ENSSMAG00000001213	frg1	83	71.698	ENSCSAG00000017729	-	98	71.698	Chlorocebus_sabaeus
ENSSMAG00000001213	frg1	100	68.605	ENSCSAG00000002899	FRG1	100	68.217	Chlorocebus_sabaeus
ENSSMAG00000001213	frg1	86	70.909	ENSCPBG00000009211	-	88	69.027	Chrysemys_picta_bellii
ENSSMAG00000001213	frg1	99	47.566	ENSCING00000005161	-	80	51.869	Ciona_intestinalis
ENSSMAG00000001213	frg1	51	54.615	ENSCSAVG00000008018	-	71	54.615	Ciona_savignyi
ENSSMAG00000001213	frg1	100	68.605	ENSCANG00000020991	FRG1	100	68.217	Colobus_angolensis_palliatus
ENSSMAG00000001213	frg1	100	68.605	ENSCGRG00001014998	Frg1	100	68.217	Cricetulus_griseus_chok1gshd
ENSSMAG00000001213	frg1	100	55.642	ENSCGRG00000003902	-	96	55.642	Cricetulus_griseus_crigri
ENSSMAG00000001213	frg1	100	68.605	ENSCGRG00000011860	-	100	68.217	Cricetulus_griseus_crigri
ENSSMAG00000001213	frg1	96	79.918	ENSCSEG00000015950	frg1	100	79.918	Cynoglossus_semilaevis
ENSSMAG00000001213	frg1	100	81.961	ENSCVAG00000009985	frg1	100	81.961	Cyprinodon_variegatus
ENSSMAG00000001213	frg1	100	79.216	ENSDARG00000056504	frg1	100	81.690	Danio_rerio
ENSSMAG00000001213	frg1	100	68.605	ENSDNOG00000014886	FRG1	100	68.605	Dasypus_novemcinctus
ENSSMAG00000001213	frg1	100	60.465	ENSDORG00000016190	Frg1	100	61.628	Dipodomys_ordii
ENSSMAG00000001213	frg1	100	46.442	FBgn0036964	FRG1	81	50.230	Drosophila_melanogaster
ENSSMAG00000001213	frg1	100	68.992	ENSETEG00000012349	-	100	67.829	Echinops_telfairi
ENSSMAG00000001213	frg1	58	51.007	ENSEBUG00000014053	frg1	80	49.677	Eptatretus_burgeri
ENSSMAG00000001213	frg1	58	56.081	ENSEBUG00000012359	FRG1	70	64.348	Eptatretus_burgeri
ENSSMAG00000001213	frg1	100	69.650	ENSEASG00005017497	FRG1	100	70.039	Equus_asinus_asinus
ENSSMAG00000001213	frg1	100	69.650	ENSECAG00000003122	FRG1	100	70.039	Equus_caballus
ENSSMAG00000001213	frg1	62	73.885	ENSEEUG00000000145	-	100	73.885	Erinaceus_europaeus
ENSSMAG00000001213	frg1	100	81.569	ENSELUG00000021712	frg1	100	81.569	Esox_lucius
ENSSMAG00000001213	frg1	100	68.217	ENSFCAG00000025737	FRG1	100	68.605	Felis_catus
ENSSMAG00000001213	frg1	87	68.468	ENSFALG00000011231	-	89	67.257	Ficedula_albicollis
ENSSMAG00000001213	frg1	100	59.615	ENSFDAG00000012697	-	98	62.617	Fukomys_damarensis
ENSSMAG00000001213	frg1	100	69.650	ENSFDAG00000000962	-	100	70.039	Fukomys_damarensis
ENSSMAG00000001213	frg1	100	81.569	ENSFHEG00000010540	frg1	100	81.176	Fundulus_heteroclitus
ENSSMAG00000001213	frg1	100	78.431	ENSGMOG00000000867	frg1	100	78.431	Gadus_morhua
ENSSMAG00000001213	frg1	100	68.750	ENSGALG00000013590	-	100	69.141	Gallus_gallus
ENSSMAG00000001213	frg1	81	76.329	ENSGAFG00000013855	frg1	100	76.329	Gambusia_affinis
ENSSMAG00000001213	frg1	100	85.098	ENSGACG00000016888	frg1	100	85.098	Gasterosteus_aculeatus
ENSSMAG00000001213	frg1	100	69.531	ENSGAGG00000025012	-	100	69.531	Gopherus_agassizii
ENSSMAG00000001213	frg1	100	42.966	ENSGGOG00000040796	-	67	54.037	Gorilla_gorilla
ENSSMAG00000001213	frg1	67	69.591	ENSGGOG00000012888	-	86	69.591	Gorilla_gorilla
ENSSMAG00000001213	frg1	100	83.137	ENSHBUG00000010667	frg1	100	83.137	Haplochromis_burtoni
ENSSMAG00000001213	frg1	100	70.039	ENSHGLG00000005601	FRG1	100	70.817	Heterocephalus_glaber_female
ENSSMAG00000001213	frg1	100	58.594	ENSHGLG00000001211	-	100	58.984	Heterocephalus_glaber_female
ENSSMAG00000001213	frg1	99	66.016	ENSHGLG00000020943	-	99	66.797	Heterocephalus_glaber_female
ENSSMAG00000001213	frg1	99	66.797	ENSHGLG00000020402	-	94	67.578	Heterocephalus_glaber_female
ENSSMAG00000001213	frg1	100	58.984	ENSHGLG00100010674	-	100	59.375	Heterocephalus_glaber_male
ENSSMAG00000001213	frg1	100	70.428	ENSHGLG00100016261	-	100	71.206	Heterocephalus_glaber_male
ENSSMAG00000001213	frg1	99	66.016	ENSHGLG00100021211	-	99	66.797	Heterocephalus_glaber_male
ENSSMAG00000001213	frg1	100	55.859	ENSHGLG00100015285	-	100	54.688	Heterocephalus_glaber_male
ENSSMAG00000001213	frg1	88	82.667	ENSHCOG00000000224	frg1	97	82.819	Hippocampus_comes
ENSSMAG00000001213	frg1	100	77.043	ENSIPUG00000022716	frg1	100	78.210	Ictalurus_punctatus
ENSSMAG00000001213	frg1	100	68.605	ENSSTOG00000002857	-	100	68.217	Ictidomys_tridecemlineatus
ENSSMAG00000001213	frg1	100	68.217	ENSJJAG00000020625	Frg1	100	68.605	Jaculus_jaculus
ENSSMAG00000001213	frg1	100	82.745	ENSKMAG00000005841	frg1	100	82.745	Kryptolebias_marmoratus
ENSSMAG00000001213	frg1	100	84.314	ENSLBEG00000001466	frg1	100	84.314	Labrus_bergylta
ENSSMAG00000001213	frg1	100	60.536	ENSLACG00000010243	frg1	100	60.536	Latimeria_chalumnae
ENSSMAG00000001213	frg1	100	76.471	ENSLOCG00000013868	frg1	100	76.471	Lepisosteus_oculatus
ENSSMAG00000001213	frg1	100	68.217	ENSLAFG00000011191	FRG1	100	68.217	Loxodonta_africana
ENSSMAG00000001213	frg1	100	68.605	ENSMFAG00000031178	FRG1	100	68.217	Macaca_fascicularis
ENSSMAG00000001213	frg1	83	64.019	ENSMFAG00000042873	-	89	64.019	Macaca_fascicularis
ENSSMAG00000001213	frg1	78	63.547	ENSMMUG00000047496	-	87	63.547	Macaca_mulatta
ENSSMAG00000001213	frg1	100	68.605	ENSMMUG00000001824	FRG1	100	68.217	Macaca_mulatta
ENSSMAG00000001213	frg1	96	63.563	ENSMNEG00000018620	FRG1	100	63.158	Macaca_nemestrina
ENSSMAG00000001213	frg1	100	68.605	ENSMLEG00000028881	FRG1	100	68.217	Mandrillus_leucophaeus
ENSSMAG00000001213	frg1	100	86.275	ENSMAMG00000012406	frg1	100	86.275	Mastacembelus_armatus
ENSSMAG00000001213	frg1	100	82.745	ENSMZEG00005007549	frg1	100	82.745	Maylandia_zebra
ENSSMAG00000001213	frg1	100	69.141	ENSMGAG00000011481	-	100	69.531	Meleagris_gallopavo
ENSSMAG00000001213	frg1	100	68.605	ENSMAUG00000000847	Frg1	100	68.217	Mesocricetus_auratus
ENSSMAG00000001213	frg1	100	68.992	ENSMICG00000046816	FRG1	100	68.605	Microcebus_murinus
ENSSMAG00000001213	frg1	100	62.257	ENSMOCG00000023000	Frg1	100	61.868	Microtus_ochrogaster
ENSSMAG00000001213	frg1	88	83.036	ENSMMOG00000004008	frg1	96	83.186	Mola_mola
ENSSMAG00000001213	frg1	100	68.217	ENSMODG00000019031	-	87	68.217	Monodelphis_domestica
ENSSMAG00000001213	frg1	100	86.275	ENSMALG00000018497	frg1	100	86.275	Monopterus_albus
ENSSMAG00000001213	frg1	100	68.217	MGP_CAROLIEiJ_G0031006	Frg1	100	67.829	Mus_caroli
ENSSMAG00000001213	frg1	100	68.217	ENSMUSG00000031590	Frg1	100	67.829	Mus_musculus
ENSSMAG00000001213	frg1	100	68.605	MGP_PahariEiJ_G0021475	Frg1	100	68.217	Mus_pahari
ENSSMAG00000001213	frg1	100	67.829	MGP_SPRETEiJ_G0032120	Frg1	100	67.442	Mus_spretus
ENSSMAG00000001213	frg1	100	68.217	ENSMPUG00000017962	FRG1	100	68.605	Mustela_putorius_furo
ENSSMAG00000001213	frg1	100	70.817	ENSMLUG00000023179	FRG1	100	70.039	Myotis_lucifugus
ENSSMAG00000001213	frg1	100	68.605	ENSNGAG00000016411	Frg1	100	68.217	Nannospalax_galili
ENSSMAG00000001213	frg1	81	76.329	ENSNBRG00000006806	frg1	95	74.057	Neolamprologus_brichardi
ENSSMAG00000001213	frg1	78	65.672	ENSNLEG00000036059	-	86	65.672	Nomascus_leucogenys
ENSSMAG00000001213	frg1	78	64.179	ENSNLEG00000028874	-	91	64.179	Nomascus_leucogenys
ENSSMAG00000001213	frg1	100	59.302	ENSNLEG00000032333	-	100	59.302	Nomascus_leucogenys
ENSSMAG00000001213	frg1	100	68.872	ENSNLEG00000000930	FRG1	100	69.261	Nomascus_leucogenys
ENSSMAG00000001213	frg1	100	62.452	ENSNLEG00000035849	-	100	61.686	Nomascus_leucogenys
ENSSMAG00000001213	frg1	100	49.219	ENSNLEG00000032846	-	100	59.821	Nomascus_leucogenys
ENSSMAG00000001213	frg1	60	71.053	ENSMEUG00000007509	-	59	71.053	Notamacropus_eugenii
ENSSMAG00000001213	frg1	100	59.302	ENSOPRG00000004722	-	100	59.922	Ochotona_princeps
ENSSMAG00000001213	frg1	100	53.906	ENSODEG00000006953	-	91	60.287	Octodon_degus
ENSSMAG00000001213	frg1	100	69.650	ENSODEG00000006458	-	100	70.428	Octodon_degus
ENSSMAG00000001213	frg1	100	83.984	ENSONIG00000010162	frg1	100	83.984	Oreochromis_niloticus
ENSSMAG00000001213	frg1	71	70.556	ENSOANG00000005659	-	80	70.556	Ornithorhynchus_anatinus
ENSSMAG00000001213	frg1	100	68.992	ENSOCUG00000009038	-	100	68.605	Oryctolagus_cuniculus
ENSSMAG00000001213	frg1	96	82.787	ENSORLG00000008106	frg1	89	82.787	Oryzias_latipes
ENSSMAG00000001213	frg1	100	82.745	ENSORLG00020014355	frg1	100	82.745	Oryzias_latipes_hni
ENSSMAG00000001213	frg1	100	83.529	ENSORLG00015014159	frg1	100	83.529	Oryzias_latipes_hsok
ENSSMAG00000001213	frg1	88	77.232	ENSOMEG00000002468	frg1	93	77.232	Oryzias_melastigma
ENSSMAG00000001213	frg1	100	69.380	ENSOGAG00000005749	-	100	68.605	Otolemur_garnettii
ENSSMAG00000001213	frg1	100	67.433	ENSOARG00000008592	FRG1	100	67.816	Ovis_aries
ENSSMAG00000001213	frg1	84	69.444	ENSPPAG00000043170	-	100	68.981	Pan_paniscus
ENSSMAG00000001213	frg1	96	53.101	ENSPPAG00000043174	-	86	53.778	Pan_paniscus
ENSSMAG00000001213	frg1	100	67.829	ENSPPRG00000025003	-	100	68.217	Panthera_pardus
ENSSMAG00000001213	frg1	100	68.482	ENSPPRG00000019777	-	100	67.704	Panthera_pardus
ENSSMAG00000001213	frg1	100	67.829	ENSPTIG00000006588	-	100	68.217	Panthera_tigris_altaica
ENSSMAG00000001213	frg1	100	68.872	ENSPTIG00000006566	-	100	68.093	Panthera_tigris_altaica
ENSSMAG00000001213	frg1	87	62.389	ENSPTRG00000043123	-	94	60.515	Pan_troglodytes
ENSSMAG00000001213	frg1	100	68.992	ENSPTRG00000050205	-	100	68.605	Pan_troglodytes
ENSSMAG00000001213	frg1	96	57.490	ENSPTRG00000050204	-	85	62.069	Pan_troglodytes
ENSSMAG00000001213	frg1	95	56.735	ENSPTRG00000052363	-	97	60.577	Pan_troglodytes
ENSSMAG00000001213	frg1	96	58.300	ENSPTRG00000044710	-	85	63.054	Pan_troglodytes
ENSSMAG00000001213	frg1	100	68.992	ENSPTRG00000016671	-	100	68.605	Pan_troglodytes
ENSSMAG00000001213	frg1	82	56.808	ENSPANG00000031530	-	84	63.889	Papio_anubis
ENSSMAG00000001213	frg1	100	73.047	ENSPKIG00000024189	frg1	100	75.391	Paramormyrops_kingsleyae
ENSSMAG00000001213	frg1	84	73.023	ENSPSIG00000017971	-	82	73.023	Pelodiscus_sinensis
ENSSMAG00000001213	frg1	98	74.603	ENSPMGG00000019273	frg1	87	81.818	Periophthalmus_magnuspinnatus
ENSSMAG00000001213	frg1	100	68.605	ENSPEMG00000000650	Frg1	100	68.217	Peromyscus_maniculatus_bairdii
ENSSMAG00000001213	frg1	100	68.992	ENSPCIG00000007530	-	69	68.992	Phascolarctos_cinereus
ENSSMAG00000001213	frg1	100	80.392	ENSPFOG00000006721	frg1	100	80.392	Poecilia_formosa
ENSSMAG00000001213	frg1	100	80.392	ENSPMEG00000013816	frg1	100	80.392	Poecilia_mexicana
ENSSMAG00000001213	frg1	100	80.784	ENSPREG00000000097	frg1	100	80.784	Poecilia_reticulata
ENSSMAG00000001213	frg1	56	75.862	ENSPPYG00000029810	-	100	75.862	Pongo_abelii
ENSSMAG00000001213	frg1	62	67.722	ENSPPYG00000011275	-	87	67.722	Pongo_abelii
ENSSMAG00000001213	frg1	95	67.480	ENSPCAG00000014953	-	100	67.480	Procavia_capensis
ENSSMAG00000001213	frg1	79	55.882	ENSPCOG00000022726	FRG1	95	56.373	Propithecus_coquereli
ENSSMAG00000001213	frg1	100	55.426	ENSPVAG00000010551	FRG1	100	54.651	Pteropus_vampyrus
ENSSMAG00000001213	frg1	67	86.047	ENSPNYG00000015209	frg1	74	86.047	Pundamilia_nyererei
ENSSMAG00000001213	frg1	100	75.969	ENSPNAG00000013259	frg1	100	74.806	Pygocentrus_nattereri
ENSSMAG00000001213	frg1	100	68.217	ENSRNOG00000009846	Frg1	100	67.829	Rattus_norvegicus
ENSSMAG00000001213	frg1	87	68.304	ENSRBIG00000042219	-	94	67.556	Rhinopithecus_bieti
ENSSMAG00000001213	frg1	82	66.825	ENSRROG00000032084	-	88	66.825	Rhinopithecus_roxellana
ENSSMAG00000001213	frg1	100	66.667	ENSRROG00000015523	FRG1	100	66.279	Rhinopithecus_roxellana
ENSSMAG00000001213	frg1	100	70.817	ENSSBOG00000034175	FRG1	100	70.039	Saimiri_boliviensis_boliviensis
ENSSMAG00000001213	frg1	100	67.829	ENSSHAG00000005886	-	100	67.829	Sarcophilus_harrisii
ENSSMAG00000001213	frg1	97	75.403	ENSSFOG00015021361	frg1	99	74.597	Scleropages_formosus
ENSSMAG00000001213	frg1	100	86.667	ENSSDUG00000018886	frg1	100	86.667	Seriola_dumerili
ENSSMAG00000001213	frg1	100	85.882	ENSSLDG00000024191	frg1	100	85.882	Seriola_lalandi_dorsalis
ENSSMAG00000001213	frg1	65	74.405	ENSSARG00000002471	-	95	71.910	Sorex_araneus
ENSSMAG00000001213	frg1	100	70.196	ENSSPUG00000017326	-	99	71.028	Sphenodon_punctatus
ENSSMAG00000001213	frg1	100	80.000	ENSSPAG00000013294	frg1	86	87.850	Stegastes_partitus
ENSSMAG00000001213	frg1	100	68.605	ENSSSCG00000006996	FRG1	100	68.992	Sus_scrofa
ENSSMAG00000001213	frg1	100	68.359	ENSTGUG00000007028	-	100	68.359	Taeniopygia_guttata
ENSSMAG00000001213	frg1	100	82.353	ENSTRUG00000016208	frg1	100	82.353	Takifugu_rubripes
ENSSMAG00000001213	frg1	100	81.176	ENSTNIG00000007128	frg1	100	81.176	Tetraodon_nigroviridis
ENSSMAG00000001213	frg1	83	50.237	ENSTBEG00000012789	-	99	50.237	Tupaia_belangeri
ENSSMAG00000001213	frg1	100	68.217	ENSTBEG00000014491	-	100	67.829	Tupaia_belangeri
ENSSMAG00000001213	frg1	78	44.949	ENSTBEG00000017605	-	99	44.949	Tupaia_belangeri
ENSSMAG00000001213	frg1	100	67.829	ENSTTRG00000003429	FRG1	100	68.217	Tursiops_truncatus
ENSSMAG00000001213	frg1	96	67.480	ENSUAMG00000012123	-	84	73.632	Ursus_americanus
ENSSMAG00000001213	frg1	100	68.217	ENSUMAG00000021119	FRG1	100	68.605	Ursus_maritimus
ENSSMAG00000001213	frg1	100	66.667	ENSVPAG00000000616	FRG1	100	66.667	Vicugna_pacos
ENSSMAG00000001213	frg1	87	72.197	ENSVPAG00000011977	-	96	70.925	Vicugna_pacos
ENSSMAG00000001213	frg1	83	74.057	ENSVVUG00000007181	-	77	74.057	Vulpes_vulpes
ENSSMAG00000001213	frg1	100	72.374	ENSXETG00000012470	frg1	100	72.266	Xenopus_tropicalis
ENSSMAG00000001213	frg1	100	76.471	ENSXCOG00000005312	frg1	84	83.962	Xiphophorus_couchianus
ENSSMAG00000001213	frg1	100	80.392	ENSXMAG00000007751	frg1	100	80.392	Xiphophorus_maculatus