EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000001244 (Gene tree)
Gene ID: -
Gene Symbol: setd1ba
Alias: im:7156157|si:dkey-237o15.4
Full Name: SET domain containing 1B%2C a
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 11952 bases
Position: chr16:8438714-8450665
Accession: ZDB-GENE-050309-289
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000002087	RRM_1	PF00076.22	7.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000002127	-	5277	-	ENSSMAP00000002087	1758 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000001244's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000001244's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000001244	setd1ba	99	77.039	ENSAPOG00000014731	setd1ba	100	78.444	Acanthochromis_polyacanthus
ENSSMAG00000001244	setd1ba	99	72.351	ENSACIG00000016453	setd1ba	100	72.803	Amphilophus_citrinellus
ENSSMAG00000001244	setd1ba	96	77.443	ENSAOCG00000012148	setd1ba	99	78.336	Amphiprion_ocellaris
ENSSMAG00000001244	setd1ba	99	78.801	ENSAPEG00000010762	setd1ba	99	79.728	Amphiprion_percula
ENSSMAG00000001244	setd1ba	91	87.106	ENSATEG00000021563	setd1ba	99	88.006	Anabas_testudineus
ENSSMAG00000001244	setd1ba	85	57.612	ENSAPLG00000005217	SETD1B	83	58.777	Anas_platyrhynchos
ENSSMAG00000001244	setd1ba	52	71.171	ENSCAFG00020016619	SETD1B	76	56.688	Canis_lupus_dingo
ENSSMAG00000001244	setd1ba	50	71.646	ENSCHIG00000013406	SETD1B	87	61.329	Capra_hircus
ENSSMAG00000001244	setd1ba	69	53.635	ENSCPBG00000026067	SETD1B	90	53.889	Chrysemys_picta_bellii
ENSSMAG00000001244	setd1ba	51	65.758	ENSECAG00000006549	SETD1B	84	56.688	Equus_caballus
ENSSMAG00000001244	setd1ba	51	88.438	ENSGMOG00000009831	setd1ba	58	88.438	Gadus_morhua
ENSSMAG00000001244	setd1ba	55	71.611	ENSGALG00000004324	SETD1B	83	59.027	Gallus_gallus
ENSSMAG00000001244	setd1ba	88	81.908	ENSGAFG00000008712	setd1ba	97	81.908	Gambusia_affinis
ENSSMAG00000001244	setd1ba	67	57.016	ENSGAGG00000025013	SETD1B	85	59.006	Gopherus_agassizii
ENSSMAG00000001244	setd1ba	99	72.708	ENSHCOG00000001951	setd1ba	99	71.781	Hippocampus_comes
ENSSMAG00000001244	setd1ba	99	72.234	ENSKMAG00000007804	setd1ba	99	71.800	Kryptolebias_marmoratus
ENSSMAG00000001244	setd1ba	99	73.192	ENSLBEG00000020113	setd1ba	100	73.058	Labrus_bergylta
ENSSMAG00000001244	setd1ba	72	54.345	ENSLACG00000018379	SETD1B	72	54.345	Latimeria_chalumnae
ENSSMAG00000001244	setd1ba	61	78.261	ENSLAFG00000026518	SETD1B	73	74.352	Loxodonta_africana
ENSSMAG00000001244	setd1ba	99	77.334	ENSMAMG00000011027	setd1ba	100	78.036	Mastacembelus_armatus
ENSSMAG00000001244	setd1ba	63	54.179	ENSMGAG00000004421	SETD1B	82	58.150	Meleagris_gallopavo
ENSSMAG00000001244	setd1ba	99	77.554	ENSMMOG00000008190	setd1ba	99	78.133	Mola_mola
ENSSMAG00000001244	setd1ba	99	76.203	ENSNBRG00000002915	setd1ba	99	76.715	Neolamprologus_brichardi
ENSSMAG00000001244	setd1ba	66	78.209	ENSODEG00000010155	SETD1B	85	56.529	Octodon_degus
ENSSMAG00000001244	setd1ba	99	73.629	ENSORLG00000008435	setd1ba	100	73.039	Oryzias_latipes
ENSSMAG00000001244	setd1ba	99	73.757	ENSORLG00020017079	setd1ba	100	73.396	Oryzias_latipes_hni
ENSSMAG00000001244	setd1ba	53	73.313	ENSORLG00015004156	setd1ba	99	67.257	Oryzias_latipes_hsok
ENSSMAG00000001244	setd1ba	63	61.165	ENSPSIG00000015966	-	54	49.664	Pelodiscus_sinensis
ENSSMAG00000001244	setd1ba	88	80.229	ENSPMGG00000011527	setd1ba	91	80.229	Periophthalmus_magnuspinnatus
ENSSMAG00000001244	setd1ba	53	70.175	ENSPFOG00000019768	setd1ba	100	71.816	Poecilia_formosa
ENSSMAG00000001244	setd1ba	99	76.136	ENSPNYG00000009484	setd1ba	99	76.649	Pundamilia_nyererei
ENSSMAG00000001244	setd1ba	70	68.878	ENSSFOG00015004814	SETD1B	78	66.027	Scleropages_formosus
ENSSMAG00000001244	setd1ba	70	49.852	ENSSPUG00000011847	SETD1B	84	54.334	Sphenodon_punctatus
ENSSMAG00000001244	setd1ba	99	79.989	ENSSPAG00000015470	setd1ba	100	79.989	Stegastes_partitus
ENSSMAG00000001244	setd1ba	51	79.880	ENSSSCG00000009806	SETD1B	90	59.291	Sus_scrofa
ENSSMAG00000001244	setd1ba	97	71.858	ENSTRUG00000009533	setd1ba	100	72.053	Takifugu_rubripes
ENSSMAG00000001244	setd1ba	99	74.040	ENSTNIG00000009090	setd1ba	100	74.216	Tetraodon_nigroviridis