EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000001297 (Gene tree)
Gene ID: -
Gene Symbol: oscp1a
Alias: oscp1|zgc:171454
Full Name: organic solute carrier partner 1a
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 351 bases
Position: chr22:5113279-5113629
Accession: ZDB-GENE-080204-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000002088	LSM	PF01423.22	8.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000002128	-	351	-	ENSSMAP00000002088	117 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000001297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000001297's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000001297	oscp1a	62	33.333	ENSSMAG00000021020	lsm4	51	32.468

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000001297	oscp1a	98	64.348	ENSG00000181817	LSM10	93	64.348	Homo_sapiens
ENSSMAG00000001297	oscp1a	98	66.087	ENSAMEG00000019854	LSM10	93	66.087	Ailuropoda_melanoleuca
ENSSMAG00000001297	oscp1a	100	87.179	ENSACIG00000015420	oscp1a	77	87.179	Amphilophus_citrinellus
ENSSMAG00000001297	oscp1a	100	88.034	ENSAOCG00000014654	-	97	88.034	Amphiprion_ocellaris
ENSSMAG00000001297	oscp1a	100	88.034	ENSAOCG00000015618	LSM10	97	88.034	Amphiprion_ocellaris
ENSSMAG00000001297	oscp1a	92	84.259	ENSAOCG00000015607	LSM10	84	84.259	Amphiprion_ocellaris
ENSSMAG00000001297	oscp1a	92	84.259	ENSAPEG00000021851	LSM10	84	84.259	Amphiprion_percula
ENSSMAG00000001297	oscp1a	100	88.034	ENSAPEG00000021845	-	97	88.034	Amphiprion_percula
ENSSMAG00000001297	oscp1a	95	90.991	ENSATEG00000006310	oscp1a	82	90.991	Anabas_testudineus
ENSSMAG00000001297	oscp1a	96	58.929	ENSACAG00000001231	LSM10	91	58.929	Anolis_carolinensis
ENSSMAG00000001297	oscp1a	98	65.217	ENSANAG00000018759	-	93	65.217	Aotus_nancymaae
ENSSMAG00000001297	oscp1a	98	63.478	ENSANAG00000031489	-	94	63.478	Aotus_nancymaae
ENSSMAG00000001297	oscp1a	100	89.744	ENSACLG00000004728	oscp1a	95	89.744	Astatotilapia_calliptera
ENSSMAG00000001297	oscp1a	100	78.632	ENSAMXG00000025301	oscp1a	97	78.632	Astyanax_mexicanus
ENSSMAG00000001297	oscp1a	98	65.217	ENSBTAG00000024096	LSM10	94	65.217	Bos_taurus
ENSSMAG00000001297	oscp1a	98	66.087	ENSCJAG00000044880	LSM10	93	66.087	Callithrix_jacchus
ENSSMAG00000001297	oscp1a	98	66.957	ENSCAFG00000003382	LSM10	93	66.957	Canis_familiaris
ENSSMAG00000001297	oscp1a	98	66.957	ENSCAFG00020008920	LSM10	93	66.957	Canis_lupus_dingo
ENSSMAG00000001297	oscp1a	98	65.217	ENSCHIG00000009398	LSM10	94	65.217	Capra_hircus
ENSSMAG00000001297	oscp1a	98	67.826	ENSCAPG00000012567	LSM10	93	67.826	Cavia_aperea
ENSSMAG00000001297	oscp1a	98	67.826	ENSCPOG00000039302	LSM10	93	67.826	Cavia_porcellus
ENSSMAG00000001297	oscp1a	98	62.609	ENSCCAG00000008378	-	93	62.609	Cebus_capucinus
ENSSMAG00000001297	oscp1a	98	65.217	ENSCCAG00000018913	-	93	65.217	Cebus_capucinus
ENSSMAG00000001297	oscp1a	98	64.348	ENSCATG00000006589	LSM10	93	64.348	Cercocebus_atys
ENSSMAG00000001297	oscp1a	98	66.087	ENSCLAG00000008633	LSM10	93	66.087	Chinchilla_lanigera
ENSSMAG00000001297	oscp1a	98	64.348	ENSCSAG00000000134	LSM10	93	64.348	Chlorocebus_sabaeus
ENSSMAG00000001297	oscp1a	98	62.393	ENSCHOG00000008615	LSM10	94	62.393	Choloepus_hoffmanni
ENSSMAG00000001297	oscp1a	81	30.526	ENSCING00000024984	-	83	30.526	Ciona_intestinalis
ENSSMAG00000001297	oscp1a	83	31.959	ENSCSAVG00000001896	-	83	31.959	Ciona_savignyi
ENSSMAG00000001297	oscp1a	98	64.348	ENSCANG00000019928	LSM10	93	64.348	Colobus_angolensis_palliatus
ENSSMAG00000001297	oscp1a	98	66.087	ENSCGRG00001004317	-	94	66.087	Cricetulus_griseus_chok1gshd
ENSSMAG00000001297	oscp1a	97	59.483	ENSCGRG00001022673	-	93	59.483	Cricetulus_griseus_chok1gshd
ENSSMAG00000001297	oscp1a	98	66.087	ENSCGRG00000014935	-	94	66.087	Cricetulus_griseus_crigri
ENSSMAG00000001297	oscp1a	97	59.483	ENSCGRG00000015514	-	93	59.483	Cricetulus_griseus_crigri
ENSSMAG00000001297	oscp1a	99	89.655	ENSCSEG00000010374	oscp1a	78	89.655	Cynoglossus_semilaevis
ENSSMAG00000001297	oscp1a	98	80.000	ENSCVAG00000001536	oscp1a	87	80.000	Cyprinodon_variegatus
ENSSMAG00000001297	oscp1a	68	77.500	ENSDARG00000109563	CABZ01074453.1	93	77.500	Danio_rerio
ENSSMAG00000001297	oscp1a	98	77.391	ENSDARG00000101222	oscp1a	95	77.391	Danio_rerio
ENSSMAG00000001297	oscp1a	98	66.087	ENSDNOG00000036662	LSM10	93	66.087	Dasypus_novemcinctus
ENSSMAG00000001297	oscp1a	98	66.957	ENSDORG00000007579	Lsm10	93	66.957	Dipodomys_ordii
ENSSMAG00000001297	oscp1a	98	65.217	ENSETEG00000005703	LSM10	93	65.217	Echinops_telfairi
ENSSMAG00000001297	oscp1a	96	50.893	ENSEBUG00000001312	oscp1a	92	50.893	Eptatretus_burgeri
ENSSMAG00000001297	oscp1a	98	66.087	ENSEASG00005012194	LSM10	93	66.087	Equus_asinus_asinus
ENSSMAG00000001297	oscp1a	98	66.087	ENSECAG00000005071	LSM10	93	66.087	Equus_caballus
ENSSMAG00000001297	oscp1a	98	67.826	ENSEEUG00000012032	LSM10	93	67.826	Erinaceus_europaeus
ENSSMAG00000001297	oscp1a	98	85.217	ENSELUG00000007452	oscp1a	94	85.217	Esox_lucius
ENSSMAG00000001297	oscp1a	96	63.393	ENSFALG00000000851	LSM10	91	63.393	Ficedula_albicollis
ENSSMAG00000001297	oscp1a	98	66.957	ENSFDAG00000021056	LSM10	93	66.957	Fukomys_damarensis
ENSSMAG00000001297	oscp1a	97	80.702	ENSFHEG00000001058	oscp1a	98	80.702	Fundulus_heteroclitus
ENSSMAG00000001297	oscp1a	97	71.053	ENSGMOG00000019832	oscp1a	96	71.053	Gadus_morhua
ENSSMAG00000001297	oscp1a	97	64.912	ENSGALG00000002127	LSM10	93	64.912	Gallus_gallus
ENSSMAG00000001297	oscp1a	91	72.897	ENSGAFG00000016445	oscp1a	87	72.897	Gambusia_affinis
ENSSMAG00000001297	oscp1a	100	93.162	ENSGACG00000002329	oscp1a	96	93.162	Gasterosteus_aculeatus
ENSSMAG00000001297	oscp1a	97	64.602	ENSGAGG00000024848	LSM10	92	64.602	Gopherus_agassizii
ENSSMAG00000001297	oscp1a	98	64.348	ENSGGOG00000003556	LSM10	93	64.348	Gorilla_gorilla
ENSSMAG00000001297	oscp1a	100	90.598	ENSHBUG00000001722	oscp1a	95	90.598	Haplochromis_burtoni
ENSSMAG00000001297	oscp1a	98	65.217	ENSHGLG00000011625	LSM10	93	65.217	Heterocephalus_glaber_female
ENSSMAG00000001297	oscp1a	98	65.217	ENSHGLG00100001769	LSM10	93	65.217	Heterocephalus_glaber_male
ENSSMAG00000001297	oscp1a	89	75.000	ENSIPUG00000005808	oscp1a	90	75.000	Ictalurus_punctatus
ENSSMAG00000001297	oscp1a	98	66.957	ENSSTOG00000000606	LSM10	93	66.957	Ictidomys_tridecemlineatus
ENSSMAG00000001297	oscp1a	100	88.889	ENSKMAG00000012143	oscp1a	97	88.889	Kryptolebias_marmoratus
ENSSMAG00000001297	oscp1a	97	85.965	ENSLBEG00000017764	oscp1a	93	85.965	Labrus_bergylta
ENSSMAG00000001297	oscp1a	97	61.947	ENSLACG00000015904	LSM10	87	61.947	Latimeria_chalumnae
ENSSMAG00000001297	oscp1a	100	75.214	ENSLOCG00000018277	oscp1a	96	75.214	Lepisosteus_oculatus
ENSSMAG00000001297	oscp1a	98	66.087	ENSLAFG00000009600	LSM10	93	66.087	Loxodonta_africana
ENSSMAG00000001297	oscp1a	98	64.348	ENSMFAG00000009115	LSM10	93	64.348	Macaca_fascicularis
ENSSMAG00000001297	oscp1a	98	64.348	ENSMMUG00000017338	LSM10	93	64.348	Macaca_mulatta
ENSSMAG00000001297	oscp1a	98	64.348	ENSMNEG00000020023	LSM10	93	64.348	Macaca_nemestrina
ENSSMAG00000001297	oscp1a	98	64.348	ENSMLEG00000025150	LSM10	93	64.348	Mandrillus_leucophaeus
ENSSMAG00000001297	oscp1a	100	88.034	ENSMAMG00000004427	oscp1a	96	88.034	Mastacembelus_armatus
ENSSMAG00000001297	oscp1a	100	89.744	ENSMZEG00005026307	oscp1a	95	89.744	Maylandia_zebra
ENSSMAG00000001297	oscp1a	97	63.158	ENSMGAG00000015707	LSM10	93	63.158	Meleagris_gallopavo
ENSSMAG00000001297	oscp1a	98	66.957	ENSMAUG00000016624	Lsm10	94	66.957	Mesocricetus_auratus
ENSSMAG00000001297	oscp1a	98	66.087	ENSMOCG00000021943	Lsm10	94	66.087	Microtus_ochrogaster
ENSSMAG00000001297	oscp1a	95	90.090	ENSMMOG00000013597	oscp1a	83	90.090	Mola_mola
ENSSMAG00000001297	oscp1a	100	68.644	ENSMODG00000023328	LSM10	96	68.644	Monodelphis_domestica
ENSSMAG00000001297	oscp1a	98	66.087	MGP_CAROLIEiJ_G0026467	Lsm10	95	68.182	Mus_caroli
ENSSMAG00000001297	oscp1a	98	66.087	ENSMUSG00000050188	Lsm10	95	68.182	Mus_musculus
ENSSMAG00000001297	oscp1a	98	66.087	MGP_PahariEiJ_G0028798	Lsm10	95	68.182	Mus_pahari
ENSSMAG00000001297	oscp1a	98	66.087	MGP_SPRETEiJ_G0027446	Lsm10	95	68.182	Mus_spretus
ENSSMAG00000001297	oscp1a	98	66.957	ENSMPUG00000018593	LSM10	93	66.957	Mustela_putorius_furo
ENSSMAG00000001297	oscp1a	98	66.957	ENSMLUG00000023895	LSM10	93	66.957	Myotis_lucifugus
ENSSMAG00000001297	oscp1a	98	65.217	ENSNGAG00000015011	Lsm10	93	65.217	Nannospalax_galili
ENSSMAG00000001297	oscp1a	100	89.744	ENSNBRG00000014306	oscp1a	95	89.744	Neolamprologus_brichardi
ENSSMAG00000001297	oscp1a	98	65.217	ENSNLEG00000033754	LSM10	93	65.217	Nomascus_leucogenys
ENSSMAG00000001297	oscp1a	98	67.826	ENSMEUG00000006313	LSM10	93	67.826	Notamacropus_eugenii
ENSSMAG00000001297	oscp1a	98	65.217	ENSOPRG00000001699	LSM10	93	65.217	Ochotona_princeps
ENSSMAG00000001297	oscp1a	98	66.087	ENSODEG00000019161	LSM10	93	66.087	Octodon_degus
ENSSMAG00000001297	oscp1a	100	89.744	ENSONIG00000020904	oscp1a	96	89.744	Oreochromis_niloticus
ENSSMAG00000001297	oscp1a	100	68.644	ENSOANG00000002066	LSM10	96	68.644	Ornithorhynchus_anatinus
ENSSMAG00000001297	oscp1a	98	64.348	ENSOCUG00000005333	LSM10	93	64.348	Oryctolagus_cuniculus
ENSSMAG00000001297	oscp1a	100	80.342	ENSORLG00000009504	oscp1a	97	80.342	Oryzias_latipes
ENSSMAG00000001297	oscp1a	100	80.342	ENSORLG00020016201	oscp1a	97	80.342	Oryzias_latipes_hni
ENSSMAG00000001297	oscp1a	100	79.487	ENSORLG00015007794	oscp1a	97	79.487	Oryzias_latipes_hsok
ENSSMAG00000001297	oscp1a	98	66.957	ENSOGAG00000002653	LSM10	93	66.957	Otolemur_garnettii
ENSSMAG00000001297	oscp1a	98	65.217	ENSOARG00000009596	LSM10	94	65.217	Ovis_aries
ENSSMAG00000001297	oscp1a	98	64.348	ENSPPAG00000023465	LSM10	93	64.348	Pan_paniscus
ENSSMAG00000001297	oscp1a	98	66.087	ENSPPRG00000014619	LSM10	93	66.087	Panthera_pardus
ENSSMAG00000001297	oscp1a	98	66.087	ENSPTIG00000004613	LSM10	93	66.087	Panthera_tigris_altaica
ENSSMAG00000001297	oscp1a	98	64.348	ENSPTRG00000000539	LSM10	93	64.348	Pan_troglodytes
ENSSMAG00000001297	oscp1a	98	64.348	ENSPANG00000023172	LSM10	93	64.348	Papio_anubis
ENSSMAG00000001297	oscp1a	99	78.448	ENSPKIG00000003728	oscp1a	94	78.448	Paramormyrops_kingsleyae
ENSSMAG00000001297	oscp1a	97	63.717	ENSPSIG00000000590	LSM10	92	63.717	Pelodiscus_sinensis
ENSSMAG00000001297	oscp1a	62	76.712	ENSPMGG00000015718	oscp1a	95	76.712	Periophthalmus_magnuspinnatus
ENSSMAG00000001297	oscp1a	84	69.388	ENSPCIG00000014865	LSM10	72	69.388	Phascolarctos_cinereus
ENSSMAG00000001297	oscp1a	97	74.561	ENSPFOG00000020490	oscp1a	97	74.561	Poecilia_formosa
ENSSMAG00000001297	oscp1a	100	73.504	ENSPLAG00000016537	oscp1a	89	73.504	Poecilia_latipinna
ENSSMAG00000001297	oscp1a	97	72.566	ENSPMEG00000000174	oscp1a	98	72.566	Poecilia_mexicana
ENSSMAG00000001297	oscp1a	100	74.359	ENSPREG00000009899	oscp1a	89	74.359	Poecilia_reticulata
ENSSMAG00000001297	oscp1a	98	64.348	ENSPPYG00000001539	LSM10	93	64.348	Pongo_abelii
ENSSMAG00000001297	oscp1a	100	65.812	ENSPCAG00000002520	LSM10	96	65.812	Procavia_capensis
ENSSMAG00000001297	oscp1a	98	66.957	ENSPVAG00000008644	LSM10	93	66.957	Pteropus_vampyrus
ENSSMAG00000001297	oscp1a	100	90.598	ENSPNYG00000003138	oscp1a	95	90.598	Pundamilia_nyererei
ENSSMAG00000001297	oscp1a	100	82.051	ENSPNAG00000028829	oscp1a	97	82.051	Pygocentrus_nattereri
ENSSMAG00000001297	oscp1a	98	65.217	ENSRNOG00000025716	Lsm10	94	65.217	Rattus_norvegicus
ENSSMAG00000001297	oscp1a	98	64.348	ENSRBIG00000001561	LSM10	93	64.348	Rhinopithecus_bieti
ENSSMAG00000001297	oscp1a	98	64.348	ENSRROG00000011414	LSM10	93	64.348	Rhinopithecus_roxellana
ENSSMAG00000001297	oscp1a	98	65.217	ENSSBOG00000036413	-	93	65.217	Saimiri_boliviensis_boliviensis
ENSSMAG00000001297	oscp1a	98	67.826	ENSSHAG00000018056	LSM10	93	67.826	Sarcophilus_harrisii
ENSSMAG00000001297	oscp1a	98	73.913	ENSSFOG00015019954	lsm10	94	73.913	Scleropages_formosus
ENSSMAG00000001297	oscp1a	100	85.470	ENSSDUG00000007090	oscp1a	95	85.470	Seriola_dumerili
ENSSMAG00000001297	oscp1a	100	84.615	ENSSLDG00000000800	oscp1a	97	84.615	Seriola_lalandi_dorsalis
ENSSMAG00000001297	oscp1a	87	68.627	ENSSARG00000004211	LSM10	94	65.812	Sorex_araneus
ENSSMAG00000001297	oscp1a	100	89.744	ENSSPAG00000009229	oscp1a	97	89.744	Stegastes_partitus
ENSSMAG00000001297	oscp1a	98	65.217	ENSSSCG00000038916	LSM10	93	65.217	Sus_scrofa
ENSSMAG00000001297	oscp1a	97	62.832	ENSTGUG00000001600	-	93	62.832	Taeniopygia_guttata
ENSSMAG00000001297	oscp1a	97	63.717	ENSTGUG00000001602	-	93	63.717	Taeniopygia_guttata
ENSSMAG00000001297	oscp1a	98	81.739	ENSTRUG00000010531	oscp1a	93	81.739	Takifugu_rubripes
ENSSMAG00000001297	oscp1a	100	64.103	ENSTBEG00000016674	LSM10	95	64.103	Tupaia_belangeri
ENSSMAG00000001297	oscp1a	98	66.087	ENSUAMG00000020265	LSM10	93	66.087	Ursus_americanus
ENSSMAG00000001297	oscp1a	98	66.087	ENSUMAG00000001438	LSM10	53	66.087	Ursus_maritimus
ENSSMAG00000001297	oscp1a	98	66.957	ENSVVUG00000023209	LSM10	93	66.957	Vulpes_vulpes
ENSSMAG00000001297	oscp1a	98	62.609	ENSXETG00000027631	lsm10	93	62.609	Xenopus_tropicalis
ENSSMAG00000001297	oscp1a	98	76.522	ENSXCOG00000018776	oscp1a	72	76.522	Xiphophorus_couchianus
ENSSMAG00000001297	oscp1a	96	75.893	ENSXMAG00000019963	oscp1a	90	75.893	Xiphophorus_maculatus