EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000001305 (Gene tree)
Gene ID: -
Gene Symbol: zgc:66448
Alias: fi06b05|wu:fi06b05
Full Name: zgc:66448
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 5613 bases
Position: chr1:22183335-22188947
Accession: ZDB-GENE-030131-5612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000002093	zf-C2H2	PF00096.26	7.6e-43	1	7
ENSSMAP00000002093	zf-C2H2	PF00096.26	7.6e-43	2	7
ENSSMAP00000002093	zf-C2H2	PF00096.26	7.6e-43	3	7
ENSSMAP00000002093	zf-C2H2	PF00096.26	7.6e-43	4	7
ENSSMAP00000002093	zf-C2H2	PF00096.26	7.6e-43	5	7
ENSSMAP00000002093	zf-C2H2	PF00096.26	7.6e-43	6	7
ENSSMAP00000002093	zf-C2H2	PF00096.26	7.6e-43	7	7
ENSSMAP00000002093	zf-met	PF12874.7	7.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000002133	-	5360	-	ENSSMAP00000002093	1280 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000001305's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000001305's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000001305	zgc:66448	55	32.143	ENSSMAG00000008907	zbtb41	65	32.143
ENSSMAG00000001305	zgc:66448	54	40.462	ENSSMAG00000014844	-	84	40.462
ENSSMAG00000001305	zgc:66448	61	33.628	ENSSMAG00000013291	-	92	37.241

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000001305	zgc:66448	50	40.217	ENSAPOG00000004628	-	100	41.279	Acanthochromis_polyacanthus
ENSSMAG00000001305	zgc:66448	54	37.500	ENSACIG00000019710	-	80	39.310	Amphilophus_citrinellus
ENSSMAG00000001305	zgc:66448	50	31.830	ENSATEG00000018051	-	97	41.520	Anabas_testudineus
ENSSMAG00000001305	zgc:66448	50	37.755	ENSACLG00000022360	-	97	30.137	Astatotilapia_calliptera
ENSSMAG00000001305	zgc:66448	51	33.045	ENSCAFG00020014940	-	94	31.598	Canis_lupus_dingo
ENSSMAG00000001305	zgc:66448	57	33.922	ENSCPBG00000001181	-	97	42.442	Chrysemys_picta_bellii
ENSSMAG00000001305	zgc:66448	52	38.462	ENSCSAVG00000001834	-	100	43.023	Ciona_savignyi
ENSSMAG00000001305	zgc:66448	59	32.203	ENSCSAVG00000000655	-	99	43.373	Ciona_savignyi
ENSSMAG00000001305	zgc:66448	51	37.313	ENSCSAVG00000004703	-	99	40.397	Ciona_savignyi
ENSSMAG00000001305	zgc:66448	88	41.500	ENSDARG00000022952	zgc:66448	83	41.230	Danio_rerio
ENSSMAG00000001305	zgc:66448	50	40.566	ENSEASG00005004513	-	93	32.358	Equus_asinus_asinus
ENSSMAG00000001305	zgc:66448	100	64.318	ENSGAFG00000003391	zgc:66448	100	64.318	Gambusia_affinis
ENSSMAG00000001305	zgc:66448	51	32.777	ENSGACG00000013660	-	99	32.384	Gasterosteus_aculeatus
ENSSMAG00000001305	zgc:66448	85	42.330	ENSIPUG00000002548	zgc:66448	86	42.591	Ictalurus_punctatus
ENSSMAG00000001305	zgc:66448	100	66.966	ENSKMAG00000014091	zgc:66448	100	66.742	Kryptolebias_marmoratus
ENSSMAG00000001305	zgc:66448	53	40.120	ENSLBEG00000013570	-	99	36.522	Labrus_bergylta
ENSSMAG00000001305	zgc:66448	51	32.472	ENSMZEG00005022845	-	96	40.496	Maylandia_zebra
ENSSMAG00000001305	zgc:66448	50	32.898	ENSMZEG00005028104	-	96	40.777	Maylandia_zebra
ENSSMAG00000001305	zgc:66448	50	40.602	ENSMMOG00000004134	-	89	42.484	Mola_mola
ENSSMAG00000001305	zgc:66448	53	32.936	ENSMALG00000001487	-	95	33.168	Monopterus_albus
ENSSMAG00000001305	zgc:66448	55	30.118	ENSNBRG00000003124	-	89	42.442	Neolamprologus_brichardi
ENSSMAG00000001305	zgc:66448	51	39.759	ENSNBRG00000014088	-	100	45.946	Neolamprologus_brichardi
ENSSMAG00000001305	zgc:66448	50	34.568	ENSONIG00000003373	-	100	34.568	Oreochromis_niloticus
ENSSMAG00000001305	zgc:66448	50	33.737	ENSONIG00000009383	-	100	33.401	Oreochromis_niloticus
ENSSMAG00000001305	zgc:66448	100	63.760	ENSORLG00015018781	zgc:66448	100	63.609	Oryzias_latipes_hsok
ENSSMAG00000001305	zgc:66448	100	63.306	ENSOMEG00000010575	zgc:66448	100	64.073	Oryzias_melastigma
ENSSMAG00000001305	zgc:66448	54	39.130	ENSPMEG00000020593	-	82	40.777	Poecilia_mexicana
ENSSMAG00000001305	zgc:66448	51	41.916	ENSPNYG00000003392	-	93	41.916	Pundamilia_nyererei
ENSSMAG00000001305	zgc:66448	53	43.373	ENSSLDG00000007756	-	87	45.000	Seriola_lalandi_dorsalis
ENSSMAG00000001305	zgc:66448	51	33.416	ENSSPAG00000008865	-	93	41.096	Stegastes_partitus
ENSSMAG00000001305	zgc:66448	50	32.951	ENSSSCG00000038009	-	86	32.162	Sus_scrofa
ENSSMAG00000001305	zgc:66448	100	63.740	ENSXMAG00000022364	zgc:66448	100	64.042	Xiphophorus_maculatus