EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSMAG00000001465 (Gene tree)
Gene ID
-
Gene Symbol
zgc:171971
Alias
-
Full Name
zgc:171971
Gene Type
protein_coding
Species
Scophthalmus_maximus
Status
putative
Strand
Minus strand
Length
8934 bases
Position
chr18:4622794-4631727
Accession
ZDB-GENE-070928-37
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSMAP00000002336RNA_pol_Rpc4PF05132.143.2e-3011
ENSSMAP00000002353RNA_pol_Rpc4PF05132.143.2e-3011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSMAT00000002377-3220-ENSSMAP00000002336388 (aa)--
ENSSMAT00000002394-3220-ENSSMAP00000002353388 (aa)--
Gene Model
Click here to download ENSSMAG00000001465's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000001465's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSMAG00000001465zgc:1719719636.946ENSSMAG00000006271polr3d9737.990
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSMAG00000001465zgc:1719719639.512ENSG00000168495POLR3D9839.512Homo_sapiens
ENSSMAG00000001465zgc:1719719368.930ENSAPOG00000017634zgc:1719719967.961Acanthochromis_polyacanthus
ENSSMAG00000001465zgc:1719719136.990ENSAPOG00000012197polr3d9637.949Acanthochromis_polyacanthus
ENSSMAG00000001465zgc:1719719639.512ENSAMEG00000003221POLR3D9839.756Ailuropoda_melanoleuca
ENSSMAG00000001465zgc:1719719961.750ENSACIG00000003707zgc:1719719864.750Amphilophus_citrinellus
ENSSMAG00000001465zgc:1719719836.754ENSACIG00000017832polr3d10037.619Amphilophus_citrinellus
ENSSMAG00000001465zgc:1719719371.916ENSAOCG00000007733zgc:1719719970.660Amphiprion_ocellaris
ENSSMAG00000001465zgc:1719719837.019ENSAOCG00000005037polr3d10037.650Amphiprion_ocellaris
ENSSMAG00000001465zgc:1719719836.429ENSAPEG00000013751polr3d10037.321Amphiprion_percula
ENSSMAG00000001465zgc:1719719371.654ENSAPEG00000016107zgc:1719719970.560Amphiprion_percula
ENSSMAG00000001465zgc:1719719967.949ENSATEG00000023125zgc:1719719968.974Anabas_testudineus
ENSSMAG00000001465zgc:1719718738.108ENSATEG00000023119polr3d9139.295Anabas_testudineus
ENSSMAG00000001465zgc:1719718136.676ENSAPLG00000014393POLR3D9836.676Anas_platyrhynchos
ENSSMAG00000001465zgc:1719718235.955ENSACAG00000010592POLR3D9236.631Anolis_carolinensis
ENSSMAG00000001465zgc:1719719639.756ENSANAG00000030023POLR3D9839.756Aotus_nancymaae
ENSSMAG00000001465zgc:1719719969.036ENSACLG00000000074zgc:1719719971.574Astatotilapia_calliptera
ENSSMAG00000001465zgc:1719719137.371ENSACLG00000010147polr3d9938.404Astatotilapia_calliptera
ENSSMAG00000001465zgc:1719719151.366ENSAMXG00000019418zgc:1719719353.117Astyanax_mexicanus
ENSSMAG00000001465zgc:1719718639.410ENSAMXG00000010079polr3d9538.592Astyanax_mexicanus
ENSSMAG00000001465zgc:1719719639.024ENSBTAG00000010036POLR3D9839.024Bos_taurus
ENSSMAG00000001465zgc:1719719639.512ENSCJAG00000020278POLR3D9139.512Callithrix_jacchus
ENSSMAG00000001465zgc:1719719639.268ENSCAFG00000009455POLR3D9840.534Canis_familiaris
ENSSMAG00000001465zgc:1719719639.268ENSCAFG00020013027POLR3D9840.534Canis_lupus_dingo
ENSSMAG00000001465zgc:1719719639.512ENSCHIG00000012279POLR3D9839.512Capra_hircus
ENSSMAG00000001465zgc:1719719640.000ENSTSYG00000009055POLR3D9840.541Carlito_syrichta
ENSSMAG00000001465zgc:1719718038.286ENSCAPG00000010394POLR3D9738.286Cavia_aperea
ENSSMAG00000001465zgc:1719719639.756ENSCPOG00000003679POLR3D9839.756Cavia_porcellus
ENSSMAG00000001465zgc:1719719639.512ENSCCAG00000019817POLR3D9839.512Cebus_capucinus
ENSSMAG00000001465zgc:1719719639.853ENSCATG00000025950POLR3D9839.853Cercocebus_atys
ENSSMAG00000001465zgc:1719719639.416ENSCLAG00000014993POLR3D9739.416Chinchilla_lanigera
ENSSMAG00000001465zgc:1719719639.853ENSCSAG00000016525POLR3D9839.853Chlorocebus_sabaeus
ENSSMAG00000001465zgc:1719719635.784ENSCHOG00000000228POLR3D9735.784Choloepus_hoffmanni
ENSSMAG00000001465zgc:1719719638.647ENSCPBG00000001313POLR3D9838.647Chrysemys_picta_bellii
ENSSMAG00000001465zgc:1719718633.056ENSCING00000008141-8934.530Ciona_intestinalis
ENSSMAG00000001465zgc:1719718634.722ENSCSAVG00000007119-8835.613Ciona_savignyi
ENSSMAG00000001465zgc:1719719640.098ENSCANG00000043589POLR3D9840.098Colobus_angolensis_palliatus
ENSSMAG00000001465zgc:1719719639.268ENSCGRG00001010339Polr3d9839.268Cricetulus_griseus_chok1gshd
ENSSMAG00000001465zgc:1719719639.268ENSCGRG00000003956Polr3d9839.268Cricetulus_griseus_crigri
ENSSMAG00000001465zgc:1719719965.903ENSCSEG00000015509zgc:1719719965.903Cynoglossus_semilaevis
ENSSMAG00000001465zgc:1719718635.389ENSCSEG00000008123polr3d9038.292Cynoglossus_semilaevis
ENSSMAG00000001465zgc:1719719053.631ENSCVAG00000009078-9353.631Cyprinodon_variegatus
ENSSMAG00000001465zgc:1719719735.817ENSCVAG00000020687polr3d9937.410Cyprinodon_variegatus
ENSSMAG00000001465zgc:1719719849.492ENSDARG00000042054zgc:1719719749.492Danio_rerio
ENSSMAG00000001465zgc:1719719737.956ENSDARG00000104516polr3d9938.575Danio_rerio
ENSSMAG00000001465zgc:1719719640.000ENSDNOG00000013488POLR3D9840.244Dasypus_novemcinctus
ENSSMAG00000001465zgc:1719719638.293ENSDORG00000011174Polr3d9438.875Dipodomys_ordii
ENSSMAG00000001465zgc:1719719639.512ENSETEG00000016516POLR3D9839.512Echinops_telfairi
ENSSMAG00000001465zgc:1719717031.447ENSEBUG00000014414polr3d9531.454Eptatretus_burgeri
ENSSMAG00000001465zgc:1719719638.780ENSEASG00005018824POLR3D9838.780Equus_asinus_asinus
ENSSMAG00000001465zgc:1719719639.756ENSECAG00000025090-9839.756Equus_caballus
ENSSMAG00000001465zgc:1719719640.244ENSEEUG00000007632POLR3D9840.244Erinaceus_europaeus
ENSSMAG00000001465zgc:1719719736.627ENSELUG00000016978polr3d9937.470Esox_lucius
ENSSMAG00000001465zgc:1719719656.136ENSELUG00000017642zgc:1719719456.136Esox_lucius
ENSSMAG00000001465zgc:1719719639.268ENSFCAG00000005346POLR3D9839.268Felis_catus
ENSSMAG00000001465zgc:1719718139.828ENSFALG00000010907POLR3D9940.058Ficedula_albicollis
ENSSMAG00000001465zgc:1719719639.173ENSFDAG00000010144POLR3D9739.173Fukomys_damarensis
ENSSMAG00000001465zgc:1719719956.219ENSFHEG00000003803-9956.219Fundulus_heteroclitus
ENSSMAG00000001465zgc:1719719737.500ENSFHEG00000000508polr3d9939.216Fundulus_heteroclitus
ENSSMAG00000001465zgc:1719719852.604ENSGMOG00000015819zgc:17197110053.385Gadus_morhua
ENSSMAG00000001465zgc:1719718637.875ENSGMOG00000006293polr3d9639.510Gadus_morhua
ENSSMAG00000001465zgc:1719717636.585ENSGALG00000032501-8333.412Gallus_gallus
ENSSMAG00000001465zgc:1719719955.779ENSGAFG00000009259zgc:1719719955.779Gambusia_affinis
ENSSMAG00000001465zgc:1719719735.817ENSGAFG00000010268polr3d9937.530Gambusia_affinis
ENSSMAG00000001465zgc:1719719865.625ENSGACG00000015436zgc:17197110066.106Gasterosteus_aculeatus
ENSSMAG00000001465zgc:1719718837.895ENSGACG00000011126polr3d10036.730Gasterosteus_aculeatus
ENSSMAG00000001465zgc:1719719638.164ENSGAGG00000023229POLR3D9838.164Gopherus_agassizii
ENSSMAG00000001465zgc:1719719639.512ENSGGOG00000007302POLR3D9839.512Gorilla_gorilla
ENSSMAG00000001465zgc:1719719137.371ENSHBUG00000012288polr3d9938.404Haplochromis_burtoni
ENSSMAG00000001465zgc:1719719964.677ENSHBUG00000020493zgc:1719719672.508Haplochromis_burtoni
ENSSMAG00000001465zgc:1719719640.049ENSHGLG00000015415POLR3D9840.049Heterocephalus_glaber_female
ENSSMAG00000001465zgc:1719719640.049ENSHGLG00100014950POLR3D9840.049Heterocephalus_glaber_male
ENSSMAG00000001465zgc:1719719856.266ENSHCOG00000018819-9856.923Hippocampus_comes
ENSSMAG00000001465zgc:1719718638.781ENSHCOG00000002228polr3d9039.835Hippocampus_comes
ENSSMAG00000001465zgc:1719718738.442ENSIPUG00000003480polr3d9239.211Ictalurus_punctatus
ENSSMAG00000001465zgc:1719719752.284ENSIPUG00000008608zgc:1719719752.284Ictalurus_punctatus
ENSSMAG00000001465zgc:1719719639.416ENSSTOG00000016519POLR3D9739.659Ictidomys_tridecemlineatus
ENSSMAG00000001465zgc:1719719639.320ENSJJAG00000006743Polr3d9739.225Jaculus_jaculus
ENSSMAG00000001465zgc:1719719837.226ENSKMAG00000005145polr3d10037.713Kryptolebias_marmoratus
ENSSMAG00000001465zgc:1719719970.127ENSLBEG00000009545zgc:1719719971.646Labrus_bergylta
ENSSMAG00000001465zgc:1719719836.779ENSLBEG00000003430polr3d10037.440Labrus_bergylta
ENSSMAG00000001465zgc:1719719539.558ENSLACG00000016654POLR3D9739.753Latimeria_chalumnae
ENSSMAG00000001465zgc:1719719349.337ENSLOCG00000006467zgc:1719719749.873Lepisosteus_oculatus
ENSSMAG00000001465zgc:1719719039.949ENSLOCG00000016080polr3d9439.487Lepisosteus_oculatus
ENSSMAG00000001465zgc:1719719639.268ENSLAFG00000001562POLR3D9439.642Loxodonta_africana
ENSSMAG00000001465zgc:1719719639.853ENSMFAG00000029141POLR3D9839.853Macaca_fascicularis
ENSSMAG00000001465zgc:1719719639.853ENSMMUG00000023226POLR3D9839.853Macaca_mulatta
ENSSMAG00000001465zgc:1719719639.853ENSMNEG00000039410POLR3D9839.853Macaca_nemestrina
ENSSMAG00000001465zgc:1719719639.853ENSMLEG00000031413POLR3D9839.853Mandrillus_leucophaeus
ENSSMAG00000001465zgc:1719719369.437ENSMAMG00000020617zgc:1719719969.849Mastacembelus_armatus
ENSSMAG00000001465zgc:1719719837.438ENSMAMG00000008914polr3d10038.756Mastacembelus_armatus
ENSSMAG00000001465zgc:1719719137.371ENSMZEG00005011442polr3d9938.404Maylandia_zebra
ENSSMAG00000001465zgc:1719719969.036ENSMZEG00005003175zgc:1719719971.574Maylandia_zebra
ENSSMAG00000001465zgc:1719719639.512ENSMAUG00000006844Polr3d9839.512Mesocricetus_auratus
ENSSMAG00000001465zgc:1719719741.063ENSMICG00000001049POLR3D9941.787Microcebus_murinus
ENSSMAG00000001465zgc:1719719639.512ENSMOCG00000005195Polr3d9840.291Microtus_ochrogaster
ENSSMAG00000001465zgc:1719719839.078ENSMMOG00000013845polr3d10039.563Mola_mola
ENSSMAG00000001465zgc:1719719040.314ENSMODG00000009491POLR3D9640.314Monodelphis_domestica
ENSSMAG00000001465zgc:1719719969.327ENSMALG00000005659zgc:1719719970.574Monopterus_albus
ENSSMAG00000001465zgc:1719719736.386ENSMALG00000002928polr3d9936.930Monopterus_albus
ENSSMAG00000001465zgc:1719719639.024MGP_CAROLIEiJ_G0019481Polr3d9839.024Mus_caroli
ENSSMAG00000001465zgc:1719719639.024ENSMUSG00000000776Polr3d9839.024Mus_musculus
ENSSMAG00000001465zgc:1719719637.136MGP_PahariEiJ_G0030498Polr3d9837.805Mus_pahari
ENSSMAG00000001465zgc:1719719639.268MGP_SPRETEiJ_G0020373Polr3d9839.268Mus_spretus
ENSSMAG00000001465zgc:1719719639.268ENSMPUG00000003653POLR3D9839.268Mustela_putorius_furo
ENSSMAG00000001465zgc:1719719639.512ENSMLUG00000002109POLR3D9439.898Myotis_lucifugus
ENSSMAG00000001465zgc:1719719138.875ENSNGAG00000013872Polr3d9737.956Nannospalax_galili
ENSSMAG00000001465zgc:1719718854.722ENSNBRG00000022951zgc:1719719257.025Neolamprologus_brichardi
ENSSMAG00000001465zgc:1719719537.811ENSNBRG00000019106polr3d9938.025Neolamprologus_brichardi
ENSSMAG00000001465zgc:1719719640.887ENSMEUG00000000465POLR3D9840.887Notamacropus_eugenii
ENSSMAG00000001465zgc:1719719140.921ENSOPRG00000013146POLR3D9440.921Ochotona_princeps
ENSSMAG00000001465zgc:1719719638.741ENSODEG00000005884POLR3D9738.741Octodon_degus
ENSSMAG00000001465zgc:1719719969.114ENSONIG00000007280zgc:1719719972.405Oreochromis_niloticus
ENSSMAG00000001465zgc:1719719537.000ENSONIG00000010634polr3d9938.653Oreochromis_niloticus
ENSSMAG00000001465zgc:1719718737.403ENSOANG00000010776POLR3D9238.220Ornithorhynchus_anatinus
ENSSMAG00000001465zgc:1719719640.000ENSOCUG00000017410POLR3D9840.000Oryctolagus_cuniculus
ENSSMAG00000001465zgc:1719719738.072ENSORLG00000011583polr3d9938.406Oryzias_latipes
ENSSMAG00000001465zgc:1719719737.981ENSORLG00020005668polr3d9938.499Oryzias_latipes_hni
ENSSMAG00000001465zgc:1719719437.594ENSORLG00015020291polr3d9837.940Oryzias_latipes_hsok
ENSSMAG00000001465zgc:1719719037.958ENSOMEG00000010120polr3d10038.480Oryzias_melastigma
ENSSMAG00000001465zgc:1719719640.587ENSOGAG00000004912POLR3D9840.342Otolemur_garnettii
ENSSMAG00000001465zgc:1719719638.780ENSOARG00000010372-7838.780Ovis_aries
ENSSMAG00000001465zgc:1719716931.338ENSOARG00000009142-9831.338Ovis_aries
ENSSMAG00000001465zgc:1719719639.512ENSPPAG00000029591POLR3D9839.512Pan_paniscus
ENSSMAG00000001465zgc:1719719639.268ENSPPRG00000022827POLR3D9839.268Panthera_pardus
ENSSMAG00000001465zgc:1719719639.756ENSPTIG00000018239POLR3D9839.756Panthera_tigris_altaica
ENSSMAG00000001465zgc:1719719639.512ENSPTRG00000020056POLR3D9839.512Pan_troglodytes
ENSSMAG00000001465zgc:1719719639.853ENSPANG00000009440POLR3D9839.853Papio_anubis
ENSSMAG00000001465zgc:1719719736.124ENSPKIG00000006727polr3d9936.124Paramormyrops_kingsleyae
ENSSMAG00000001465zgc:1719719853.367ENSPKIG00000025283zgc:1719719753.865Paramormyrops_kingsleyae
ENSSMAG00000001465zgc:1719719736.516ENSPSIG00000006113POLR3D9836.691Pelodiscus_sinensis
ENSSMAG00000001465zgc:1719719839.951ENSPMGG00000021658polr3d10039.756Periophthalmus_magnuspinnatus
ENSSMAG00000001465zgc:1719719139.642ENSPEMG00000023314Polr3d9440.458Peromyscus_maniculatus_bairdii
ENSSMAG00000001465zgc:1719719835.267ENSPMAG00000001455polr3d9836.427Petromyzon_marinus
ENSSMAG00000001465zgc:1719719640.148ENSPCIG00000012699POLR3D9840.148Phascolarctos_cinereus
ENSSMAG00000001465zgc:1719719737.470ENSPFOG00000012698polr3d9939.320Poecilia_formosa
ENSSMAG00000001465zgc:1719719956.391ENSPFOG00000011089zgc:1719719956.391Poecilia_formosa
ENSSMAG00000001465zgc:1719719949.485ENSPLAG00000003645zgc:1719719949.485Poecilia_latipinna
ENSSMAG00000001465zgc:1719719737.470ENSPLAG00000008149polr3d9939.320Poecilia_latipinna
ENSSMAG00000001465zgc:1719719955.890ENSPMEG00000016953zgc:1719719955.890Poecilia_mexicana
ENSSMAG00000001465zgc:1719719737.864ENSPMEG00000002702polr3d9938.929Poecilia_mexicana
ENSSMAG00000001465zgc:1719719535.941ENSPREG00000007593polr3d9939.454Poecilia_reticulata
ENSSMAG00000001465zgc:1719719954.637ENSPREG00000003755-9954.637Poecilia_reticulata
ENSSMAG00000001465zgc:1719719639.512ENSPPYG00000018419POLR3D9839.512Pongo_abelii
ENSSMAG00000001465zgc:1719719738.049ENSPCAG00000001971POLR3D9839.024Procavia_capensis
ENSSMAG00000001465zgc:1719719640.000ENSPCOG00000028134POLR3D9840.732Propithecus_coquereli
ENSSMAG00000001465zgc:1719719640.000ENSPVAG00000009873POLR3D9840.000Pteropus_vampyrus
ENSSMAG00000001465zgc:1719718862.088ENSPNYG00000008902zgc:1719718964.835Pundamilia_nyererei
ENSSMAG00000001465zgc:1719719137.113ENSPNYG00000016306polr3d9938.155Pundamilia_nyererei
ENSSMAG00000001465zgc:1719718637.433ENSPNAG00000022324polr3d9836.930Pygocentrus_nattereri
ENSSMAG00000001465zgc:1719719152.432ENSPNAG00000018934zgc:1719719252.011Pygocentrus_nattereri
ENSSMAG00000001465zgc:1719719639.024ENSRNOG00000010028Polr3d9839.024Rattus_norvegicus
ENSSMAG00000001465zgc:1719719640.098ENSRBIG00000035406POLR3D9840.098Rhinopithecus_bieti
ENSSMAG00000001465zgc:1719719640.098ENSRROG00000037278POLR3D9840.098Rhinopithecus_roxellana
ENSSMAG00000001465zgc:1719719639.756ENSSBOG00000024956POLR3D9839.756Saimiri_boliviensis_boliviensis
ENSSMAG00000001465zgc:1719718138.841ENSSHAG00000018257POLR3D9938.841Sarcophilus_harrisii
ENSSMAG00000001465zgc:1719718651.549ENSSFOG00015011547zgc:1719719752.113Scleropages_formosus
ENSSMAG00000001465zgc:1719719436.715ENSSFOG00015010611polr3d9836.715Scleropages_formosus
ENSSMAG00000001465zgc:1719719738.015ENSSDUG00000020718polr3d9938.592Seriola_dumerili
ENSSMAG00000001465zgc:1719719976.923ENSSDUG00000016019zgc:1719719977.667Seriola_dumerili
ENSSMAG00000001465zgc:1719719976.675ENSSLDG00000015968zgc:1719719977.419Seriola_lalandi_dorsalis
ENSSMAG00000001465zgc:1719719738.015ENSSLDG00000009643polr3d9938.592Seriola_lalandi_dorsalis
ENSSMAG00000001465zgc:1719719638.592ENSSARG00000012844POLR3D9839.024Sorex_araneus
ENSSMAG00000001465zgc:1719719138.205ENSSPUG00000000719POLR3D9438.402Sphenodon_punctatus
ENSSMAG00000001465zgc:1719719837.381ENSSPAG00000023326polr3d10038.278Stegastes_partitus
ENSSMAG00000001465zgc:1719719965.544ENSSPAG00000010384zgc:1719719966.839Stegastes_partitus
ENSSMAG00000001465zgc:1719719639.659ENSSSCG00000009622POLR3D9739.659Sus_scrofa
ENSSMAG00000001465zgc:1719718737.466ENSTRUG00000003555polr3d9138.965Takifugu_rubripes
ENSSMAG00000001465zgc:1719719836.627ENSTNIG00000006282polr3d10037.500Tetraodon_nigroviridis
ENSSMAG00000001465zgc:1719719640.000ENSTTRG00000012745POLR3D9840.000Tursiops_truncatus
ENSSMAG00000001465zgc:1719718237.640ENSUAMG00000026868POLR3D9237.921Ursus_americanus
ENSSMAG00000001465zgc:1719719140.153ENSUMAG00000005099POLR3D9440.153Ursus_maritimus
ENSSMAG00000001465zgc:1719719639.268ENSVVUG00000005290POLR3D9840.534Vulpes_vulpes
ENSSMAG00000001465zgc:1719719537.136ENSXETG00000010534polr3d9837.198Xenopus_tropicalis
ENSSMAG00000001465zgc:1719719736.456ENSXCOG00000015872polr3d9938.693Xiphophorus_couchianus
ENSSMAG00000001465zgc:1719719954.523ENSXMAG00000014555-9954.523Xiphophorus_maculatus
ENSSMAG00000001465zgc:1719719735.337ENSXMAG00000001872polr3d9937.831Xiphophorus_maculatus

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