EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000001532 (Gene tree)
Gene ID: -
Gene Symbol: tdrkh
Alias: TDRD2|zgc:113056
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 8337 bases
Position: chr18:4645139-4653475
Accession: ZDB-GENE-050327-81
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000002489	KH_1	PF00013.29	1.3e-16	1	1
ENSSMAP00000002514	KH_1	PF00013.29	1.5e-16	1	1
ENSSMAP00000002470	KH_1	PF00013.29	1.7e-16	1	1
ENSSMAP00000002470	TUDOR	PF00567.24	4.2e-26	1	1
ENSSMAP00000002489	TUDOR	PF00567.24	6.9e-26	1	1
ENSSMAP00000002514	TUDOR	PF00567.24	7.3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000002513	-	1710	-	ENSSMAP00000002470	569 (aa)	-	-
ENSSMAT00000002557	-	1738	-	ENSSMAP00000002514	568 (aa)	-	-
ENSSMAT00000002532	-	1690	-	ENSSMAP00000002489	552 (aa)	-	A0A2U9CKY1

Gene Model

Click here to download ENSSMAG00000001532's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000001532's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000001532	tdrkh	100	81.216	ENSAPOG00000012653	tdrkh	100	81.216	Acanthochromis_polyacanthus
ENSSMAG00000001532	tdrkh	97	75.836	ENSACIG00000010318	tdrkh	99	75.322	Amphilophus_citrinellus
ENSSMAG00000001532	tdrkh	100	82.290	ENSAOCG00000020623	tdrkh	100	82.299	Amphiprion_ocellaris
ENSSMAG00000001532	tdrkh	100	82.290	ENSAPEG00000018388	tdrkh	100	82.290	Amphiprion_percula
ENSSMAG00000001532	tdrkh	100	84.258	ENSATEG00000023809	tdrkh	100	83.900	Anabas_testudineus
ENSSMAG00000001532	tdrkh	100	73.656	ENSACLG00000003017	tdrkh	100	73.656	Astatotilapia_calliptera
ENSSMAG00000001532	tdrkh	99	62.590	ENSAMXG00000011664	tdrkh	96	61.441	Astyanax_mexicanus
ENSSMAG00000001532	tdrkh	100	70.811	ENSCSEG00000002894	tdrkh	99	71.171	Cynoglossus_semilaevis
ENSSMAG00000001532	tdrkh	88	62.319	ENSCVAG00000020347	tdrkh	78	77.941	Cyprinodon_variegatus
ENSSMAG00000001532	tdrkh	99	61.717	ENSDARG00000053474	tdrkh	97	62.410	Danio_rerio
ENSSMAG00000001532	tdrkh	100	65.901	ENSELUG00000024537	tdrkh	97	63.853	Esox_lucius
ENSSMAG00000001532	tdrkh	100	74.910	ENSFHEG00000003544	tdrkh	100	74.731	Fundulus_heteroclitus
ENSSMAG00000001532	tdrkh	100	66.192	ENSGMOG00000009304	tdrkh	97	66.667	Gadus_morhua
ENSSMAG00000001532	tdrkh	100	70.968	ENSGAFG00000010754	tdrkh	100	70.789	Gambusia_affinis
ENSSMAG00000001532	tdrkh	100	74.286	ENSGACG00000015258	tdrkh	97	74.327	Gasterosteus_aculeatus
ENSSMAG00000001532	tdrkh	100	73.477	ENSHBUG00000017609	tdrkh	100	73.297	Haplochromis_burtoni
ENSSMAG00000001532	tdrkh	99	62.298	ENSIPUG00000009673	tdrkh	99	62.298	Ictalurus_punctatus
ENSSMAG00000001532	tdrkh	100	73.118	ENSKMAG00000016638	tdrkh	93	73.118	Kryptolebias_marmoratus
ENSSMAG00000001532	tdrkh	100	77.996	ENSLBEG00000027323	tdrkh	97	77.996	Labrus_bergylta
ENSSMAG00000001532	tdrkh	99	50.970	ENSLOCG00000011381	tdrkh	99	50.970	Lepisosteus_oculatus
ENSSMAG00000001532	tdrkh	100	78.136	ENSMAMG00000020343	tdrkh	100	78.136	Mastacembelus_armatus
ENSSMAG00000001532	tdrkh	100	73.656	ENSMZEG00005006755	tdrkh	100	73.656	Maylandia_zebra
ENSSMAG00000001532	tdrkh	97	74.444	ENSMMOG00000020663	tdrkh	96	72.583	Mola_mola
ENSSMAG00000001532	tdrkh	100	77.061	ENSMALG00000015401	tdrkh	100	76.882	Monopterus_albus
ENSSMAG00000001532	tdrkh	100	70.430	ENSNBRG00000023815	tdrkh	100	70.251	Neolamprologus_brichardi
ENSSMAG00000001532	tdrkh	100	69.892	ENSORLG00000029204	tdrkh	99	70.072	Oryzias_latipes
ENSSMAG00000001532	tdrkh	96	68.224	ENSORLG00020016168	tdrkh	99	68.411	Oryzias_latipes_hni
ENSSMAG00000001532	tdrkh	100	66.487	ENSORLG00015014094	tdrkh	97	68.819	Oryzias_latipes_hsok
ENSSMAG00000001532	tdrkh	100	70.968	ENSOMEG00000015063	tdrkh	92	70.714	Oryzias_melastigma
ENSSMAG00000001532	tdrkh	100	57.576	ENSPKIG00000017597	tdrkh	100	56.863	Paramormyrops_kingsleyae
ENSSMAG00000001532	tdrkh	100	67.965	ENSPMGG00000019362	tdrkh	100	68.319	Periophthalmus_magnuspinnatus
ENSSMAG00000001532	tdrkh	100	70.968	ENSPFOG00000013032	tdrkh	94	70.789	Poecilia_formosa
ENSSMAG00000001532	tdrkh	100	71.147	ENSPLAG00000004193	tdrkh	100	70.968	Poecilia_latipinna
ENSSMAG00000001532	tdrkh	100	70.968	ENSPMEG00000016502	tdrkh	100	70.789	Poecilia_mexicana
ENSSMAG00000001532	tdrkh	100	68.817	ENSPREG00000004213	tdrkh	97	66.132	Poecilia_reticulata
ENSSMAG00000001532	tdrkh	97	73.333	ENSPNYG00000022818	tdrkh	98	73.028	Pundamilia_nyererei
ENSSMAG00000001532	tdrkh	99	61.538	ENSPNAG00000008783	tdrkh	97	60.536	Pygocentrus_nattereri
ENSSMAG00000001532	tdrkh	100	55.814	ENSSFOG00015001048	tdrkh	100	56.172	Scleropages_formosus
ENSSMAG00000001532	tdrkh	100	84.014	ENSSDUG00000013393	tdrkh	100	84.369	Seriola_dumerili
ENSSMAG00000001532	tdrkh	100	84.192	ENSSLDG00000017418	tdrkh	100	84.192	Seriola_lalandi_dorsalis
ENSSMAG00000001532	tdrkh	100	82.648	ENSSPAG00000006435	tdrkh	95	82.648	Stegastes_partitus
ENSSMAG00000001532	tdrkh	97	70.501	ENSTRUG00000006644	tdrkh	97	70.315	Takifugu_rubripes
ENSSMAG00000001532	tdrkh	99	68.750	ENSTNIG00000003157	tdrkh	99	68.214	Tetraodon_nigroviridis
ENSSMAG00000001532	tdrkh	88	78.082	ENSXCOG00000016972	tdrkh	98	83.333	Xiphophorus_couchianus
ENSSMAG00000001532	tdrkh	100	68.996	ENSXMAG00000014756	tdrkh	100	68.817	Xiphophorus_maculatus