EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000001546 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh2b
Alias: zgc:56602
Full Name: ribonuclease H2%2C subunit B
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 5205 bases
Position: chr14:15827886-15833090
Accession: ZDB-GENE-040426-1090
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000002481	RNase_H2-Ydr279	PF09468.10	1.6e-17	1	1
ENSSMAP00000002461	RNase_H2-Ydr279	PF09468.10	1.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000002505	-	2542	-	ENSSMAP00000002461	304 (aa)	-	A0A2U9CCF3
ENSSMAT00000002523	-	2464	-	ENSSMAP00000002481	278 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000001546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000001546's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000001546	rnaseh2b	88	51.986	ENSG00000136104	RNASEH2B	99	51.739	Homo_sapiens
ENSSMAG00000001546	rnaseh2b	100	85.621	ENSAPOG00000010496	rnaseh2b	100	85.621	Acanthochromis_polyacanthus
ENSSMAG00000001546	rnaseh2b	87	51.661	ENSAMEG00000012040	RNASEH2B	92	51.838	Ailuropoda_melanoleuca
ENSSMAG00000001546	rnaseh2b	100	70.492	ENSACIG00000021991	rnaseh2b	97	76.884	Amphilophus_citrinellus
ENSSMAG00000001546	rnaseh2b	100	84.641	ENSAOCG00000013398	rnaseh2b	100	84.641	Amphiprion_ocellaris
ENSSMAG00000001546	rnaseh2b	100	84.314	ENSAPEG00000006033	rnaseh2b	100	84.314	Amphiprion_percula
ENSSMAG00000001546	rnaseh2b	100	85.294	ENSATEG00000008370	rnaseh2b	100	85.294	Anabas_testudineus
ENSSMAG00000001546	rnaseh2b	83	63.281	ENSAPLG00000008955	RNASEH2B	99	63.469	Anas_platyrhynchos
ENSSMAG00000001546	rnaseh2b	93	55.172	ENSACAG00000011679	RNASEH2B	97	55.172	Anolis_carolinensis
ENSSMAG00000001546	rnaseh2b	88	52.206	ENSANAG00000020662	RNASEH2B	87	52.015	Aotus_nancymaae
ENSSMAG00000001546	rnaseh2b	100	80.719	ENSACLG00000000467	rnaseh2b	100	80.719	Astatotilapia_calliptera
ENSSMAG00000001546	rnaseh2b	99	67.974	ENSAMXG00000014351	rnaseh2b	99	67.974	Astyanax_mexicanus
ENSSMAG00000001546	rnaseh2b	90	50.000	ENSBTAG00000020149	RNASEH2B	90	50.000	Bos_taurus
ENSSMAG00000001546	rnaseh2b	88	43.320	ENSCJAG00000003822	-	90	43.320	Callithrix_jacchus
ENSSMAG00000001546	rnaseh2b	87	51.866	ENSCJAG00000008585	-	88	51.866	Callithrix_jacchus
ENSSMAG00000001546	rnaseh2b	87	51.866	ENSCAFG00000004295	RNASEH2B	88	51.866	Canis_familiaris
ENSSMAG00000001546	rnaseh2b	87	51.493	ENSCAFG00020000250	RNASEH2B	88	51.493	Canis_lupus_dingo
ENSSMAG00000001546	rnaseh2b	87	51.685	ENSCHIG00000018220	RNASEH2B	87	51.685	Capra_hircus
ENSSMAG00000001546	rnaseh2b	75	48.276	ENSCHIG00000012982	-	82	48.276	Capra_hircus
ENSSMAG00000001546	rnaseh2b	87	43.233	ENSTSYG00000031177	-	86	43.233	Carlito_syrichta
ENSSMAG00000001546	rnaseh2b	87	51.119	ENSTSYG00000009176	-	87	51.119	Carlito_syrichta
ENSSMAG00000001546	rnaseh2b	87	42.910	ENSCAPG00000009978	RNASEH2B	91	42.910	Cavia_aperea
ENSSMAG00000001546	rnaseh2b	87	48.889	ENSCPOG00000032527	RNASEH2B	86	48.889	Cavia_porcellus
ENSSMAG00000001546	rnaseh2b	87	52.239	ENSCCAG00000026979	RNASEH2B	88	52.060	Cebus_capucinus
ENSSMAG00000001546	rnaseh2b	85	52.290	ENSCATG00000031336	RNASEH2B	74	52.290	Cercocebus_atys
ENSSMAG00000001546	rnaseh2b	90	51.799	ENSCLAG00000003517	RNASEH2B	76	51.799	Chinchilla_lanigera
ENSSMAG00000001546	rnaseh2b	86	51.311	ENSCSAG00000017701	RNASEH2B	81	51.311	Chlorocebus_sabaeus
ENSSMAG00000001546	rnaseh2b	97	41.528	ENSCHOG00000013688	RNASEH2B	95	42.517	Choloepus_hoffmanni
ENSSMAG00000001546	rnaseh2b	99	58.117	ENSCPBG00000008684	RNASEH2B	95	58.117	Chrysemys_picta_bellii
ENSSMAG00000001546	rnaseh2b	88	34.420	ENSCING00000016454	-	90	34.420	Ciona_intestinalis
ENSSMAG00000001546	rnaseh2b	87	51.661	ENSCANG00000041511	-	87	51.471	Colobus_angolensis_palliatus
ENSSMAG00000001546	rnaseh2b	87	52.985	ENSCGRG00001000611	Rnaseh2b	87	53.358	Cricetulus_griseus_chok1gshd
ENSSMAG00000001546	rnaseh2b	87	52.985	ENSCGRG00000006077	Rnaseh2b	87	53.358	Cricetulus_griseus_crigri
ENSSMAG00000001546	rnaseh2b	100	82.680	ENSCSEG00000004910	rnaseh2b	100	82.680	Cynoglossus_semilaevis
ENSSMAG00000001546	rnaseh2b	100	78.105	ENSCVAG00000005212	rnaseh2b	100	78.105	Cyprinodon_variegatus
ENSSMAG00000001546	rnaseh2b	99	71.475	ENSDARG00000005128	rnaseh2b	99	71.475	Danio_rerio
ENSSMAG00000001546	rnaseh2b	87	51.111	ENSDNOG00000049666	-	87	51.111	Dasypus_novemcinctus
ENSSMAG00000001546	rnaseh2b	87	48.881	ENSDNOG00000034290	-	86	48.881	Dasypus_novemcinctus
ENSSMAG00000001546	rnaseh2b	87	52.060	ENSDORG00000010708	Rnaseh2b	86	52.060	Dipodomys_ordii
ENSSMAG00000001546	rnaseh2b	63	31.285	FBgn0030507	CG11164	52	31.285	Drosophila_melanogaster
ENSSMAG00000001546	rnaseh2b	83	40.157	ENSEBUG00000005965	rnaseh2b	97	40.157	Eptatretus_burgeri
ENSSMAG00000001546	rnaseh2b	87	52.612	ENSEASG00005017323	RNASEH2B	86	52.612	Equus_asinus_asinus
ENSSMAG00000001546	rnaseh2b	87	52.985	ENSECAG00000014262	RNASEH2B	86	52.985	Equus_caballus
ENSSMAG00000001546	rnaseh2b	100	77.199	ENSELUG00000019560	rnaseh2b	100	77.199	Esox_lucius
ENSSMAG00000001546	rnaseh2b	85	50.575	ENSFCAG00000014257	RNASEH2B	82	50.575	Felis_catus
ENSSMAG00000001546	rnaseh2b	90	61.733	ENSFALG00000008435	RNASEH2B	94	61.733	Ficedula_albicollis
ENSSMAG00000001546	rnaseh2b	87	50.746	ENSFDAG00000009920	RNASEH2B	93	50.746	Fukomys_damarensis
ENSSMAG00000001546	rnaseh2b	100	81.373	ENSFHEG00000012160	rnaseh2b	100	81.373	Fundulus_heteroclitus
ENSSMAG00000001546	rnaseh2b	100	69.231	ENSGMOG00000016830	rnaseh2b	100	69.231	Gadus_morhua
ENSSMAG00000001546	rnaseh2b	95	58.362	ENSGALG00000017015	RNASEH2B	100	58.766	Gallus_gallus
ENSSMAG00000001546	rnaseh2b	100	81.699	ENSGAFG00000021222	rnaseh2b	100	81.699	Gambusia_affinis
ENSSMAG00000001546	rnaseh2b	100	77.885	ENSGACG00000002821	rnaseh2b	100	77.885	Gasterosteus_aculeatus
ENSSMAG00000001546	rnaseh2b	90	61.372	ENSGAGG00000014722	RNASEH2B	99	61.372	Gopherus_agassizii
ENSSMAG00000001546	rnaseh2b	87	52.030	ENSGGOG00000001044	RNASEH2B	87	51.838	Gorilla_gorilla
ENSSMAG00000001546	rnaseh2b	100	81.373	ENSHBUG00000006049	rnaseh2b	100	81.373	Haplochromis_burtoni
ENSSMAG00000001546	rnaseh2b	87	50.929	ENSHGLG00100015953	RNASEH2B	91	50.929	Heterocephalus_glaber_male
ENSSMAG00000001546	rnaseh2b	100	75.649	ENSHCOG00000003318	rnaseh2b	100	75.649	Hippocampus_comes
ENSSMAG00000001546	rnaseh2b	100	73.290	ENSIPUG00000023815	rnaseh2b	100	73.290	Ictalurus_punctatus
ENSSMAG00000001546	rnaseh2b	89	51.825	ENSSTOG00000015126	RNASEH2B	93	51.825	Ictidomys_tridecemlineatus
ENSSMAG00000001546	rnaseh2b	87	52.256	ENSJJAG00000013335	Rnaseh2b	90	52.256	Jaculus_jaculus
ENSSMAG00000001546	rnaseh2b	100	82.026	ENSKMAG00000002198	rnaseh2b	100	82.026	Kryptolebias_marmoratus
ENSSMAG00000001546	rnaseh2b	100	82.026	ENSLBEG00000019331	rnaseh2b	100	82.026	Labrus_bergylta
ENSSMAG00000001546	rnaseh2b	68	62.736	ENSLACG00000010782	RNASEH2B	92	62.719	Latimeria_chalumnae
ENSSMAG00000001546	rnaseh2b	100	69.381	ENSLOCG00000009296	rnaseh2b	100	69.381	Lepisosteus_oculatus
ENSSMAG00000001546	rnaseh2b	87	50.746	ENSLAFG00000030158	RNASEH2B	87	50.746	Loxodonta_africana
ENSSMAG00000001546	rnaseh2b	87	52.239	ENSMFAG00000038464	-	86	52.045	Macaca_fascicularis
ENSSMAG00000001546	rnaseh2b	87	48.120	ENSMMUG00000021746	RNASEH2B	86	47.982	Macaca_mulatta
ENSSMAG00000001546	rnaseh2b	87	52.239	ENSMNEG00000030580	RNASEH2B	86	52.045	Macaca_nemestrina
ENSSMAG00000001546	rnaseh2b	87	51.661	ENSMLEG00000043911	-	87	51.471	Mandrillus_leucophaeus
ENSSMAG00000001546	rnaseh2b	100	86.275	ENSMAMG00000017109	rnaseh2b	100	86.275	Mastacembelus_armatus
ENSSMAG00000001546	rnaseh2b	100	76.797	ENSMZEG00005021926	rnaseh2b	100	77.124	Maylandia_zebra
ENSSMAG00000001546	rnaseh2b	85	60.076	ENSMGAG00000015025	RNASEH2B	97	60.432	Meleagris_gallopavo
ENSSMAG00000001546	rnaseh2b	90	51.264	ENSMAUG00000016520	Rnaseh2b	90	51.625	Mesocricetus_auratus
ENSSMAG00000001546	rnaseh2b	87	51.673	ENSMICG00000000528	RNASEH2B	87	51.673	Microcebus_murinus
ENSSMAG00000001546	rnaseh2b	99	79.868	ENSMMOG00000019799	rnaseh2b	100	84.266	Mola_mola
ENSSMAG00000001546	rnaseh2b	99	55.844	ENSMODG00000010775	RNASEH2B	100	55.844	Monodelphis_domestica
ENSSMAG00000001546	rnaseh2b	99	85.246	ENSMALG00000004463	rnaseh2b	100	85.246	Monopterus_albus
ENSSMAG00000001546	rnaseh2b	72	56.561	MGP_CAROLIEiJ_G0019389	Rnaseh2b	81	57.014	Mus_caroli
ENSSMAG00000001546	rnaseh2b	87	54.104	ENSMUSG00000021932	Rnaseh2b	87	54.104	Mus_musculus
ENSSMAG00000001546	rnaseh2b	95	41.194	MGP_PahariEiJ_G0030407	-	95	41.194	Mus_pahari
ENSSMAG00000001546	rnaseh2b	78	48.636	ENSMPUG00000018010	RNASEH2B	89	48.636	Mustela_putorius_furo
ENSSMAG00000001546	rnaseh2b	87	53.875	ENSMLUG00000004065	-	86	53.875	Myotis_lucifugus
ENSSMAG00000001546	rnaseh2b	100	80.065	ENSNBRG00000003253	rnaseh2b	100	80.065	Neolamprologus_brichardi
ENSSMAG00000001546	rnaseh2b	87	52.030	ENSNLEG00000003804	RNASEH2B	87	51.838	Nomascus_leucogenys
ENSSMAG00000001546	rnaseh2b	90	56.584	ENSMEUG00000003665	RNASEH2B	96	56.584	Notamacropus_eugenii
ENSSMAG00000001546	rnaseh2b	52	49.080	ENSOPRG00000003695	-	51	51.515	Ochotona_princeps
ENSSMAG00000001546	rnaseh2b	74	46.377	ENSODEG00000005412	-	86	49.519	Octodon_degus
ENSSMAG00000001546	rnaseh2b	87	52.045	ENSODEG00000006793	-	87	52.045	Octodon_degus
ENSSMAG00000001546	rnaseh2b	100	81.046	ENSONIG00000006657	rnaseh2b	100	81.046	Oreochromis_niloticus
ENSSMAG00000001546	rnaseh2b	89	58.423	ENSOANG00000015537	RNASEH2B	96	58.423	Ornithorhynchus_anatinus
ENSSMAG00000001546	rnaseh2b	88	49.265	ENSOCUG00000008904	RNASEH2B	85	50.368	Oryctolagus_cuniculus
ENSSMAG00000001546	rnaseh2b	99	76.159	ENSORLG00000011850	rnaseh2b	100	76.159	Oryzias_latipes
ENSSMAG00000001546	rnaseh2b	99	76.490	ENSORLG00020012081	rnaseh2b	100	76.490	Oryzias_latipes_hni
ENSSMAG00000001546	rnaseh2b	99	75.828	ENSORLG00015015468	rnaseh2b	100	75.828	Oryzias_latipes_hsok
ENSSMAG00000001546	rnaseh2b	99	77.815	ENSOMEG00000012441	rnaseh2b	100	77.815	Oryzias_melastigma
ENSSMAG00000001546	rnaseh2b	87	52.941	ENSOGAG00000016486	RNASEH2B	91	52.941	Otolemur_garnettii
ENSSMAG00000001546	rnaseh2b	89	51.273	ENSOARG00000008701	RNASEH2B	92	51.273	Ovis_aries
ENSSMAG00000001546	rnaseh2b	87	52.030	ENSPPAG00000026374	RNASEH2B	97	47.788	Pan_paniscus
ENSSMAG00000001546	rnaseh2b	87	50.000	ENSPPRG00000012450	RNASEH2B	89	50.000	Panthera_pardus
ENSSMAG00000001546	rnaseh2b	87	50.368	ENSPTIG00000013918	RNASEH2B	97	50.368	Panthera_tigris_altaica
ENSSMAG00000001546	rnaseh2b	87	52.030	ENSPTRG00000005886	RNASEH2B	95	54.217	Pan_troglodytes
ENSSMAG00000001546	rnaseh2b	87	51.661	ENSPANG00000022424	-	87	51.471	Papio_anubis
ENSSMAG00000001546	rnaseh2b	100	69.055	ENSPKIG00000013386	rnaseh2b	100	69.055	Paramormyrops_kingsleyae
ENSSMAG00000001546	rnaseh2b	58	59.259	ENSPSIG00000002224	RNASEH2B	75	59.259	Pelodiscus_sinensis
ENSSMAG00000001546	rnaseh2b	65	80.000	ENSPMGG00000010299	rnaseh2b	97	80.000	Periophthalmus_magnuspinnatus
ENSSMAG00000001546	rnaseh2b	87	52.612	ENSPEMG00000019721	Rnaseh2b	87	52.963	Peromyscus_maniculatus_bairdii
ENSSMAG00000001546	rnaseh2b	93	54.355	ENSPCIG00000014535	-	96	54.355	Phascolarctos_cinereus
ENSSMAG00000001546	rnaseh2b	100	80.844	ENSPFOG00000016722	rnaseh2b	100	80.844	Poecilia_formosa
ENSSMAG00000001546	rnaseh2b	100	81.373	ENSPLAG00000011755	rnaseh2b	100	81.373	Poecilia_latipinna
ENSSMAG00000001546	rnaseh2b	100	81.699	ENSPMEG00000002721	rnaseh2b	100	81.699	Poecilia_mexicana
ENSSMAG00000001546	rnaseh2b	100	81.373	ENSPREG00000007737	rnaseh2b	100	81.373	Poecilia_reticulata
ENSSMAG00000001546	rnaseh2b	87	51.838	ENSPPYG00000005378	RNASEH2B	86	51.838	Pongo_abelii
ENSSMAG00000001546	rnaseh2b	87	52.222	ENSPCOG00000026623	RNASEH2B	87	52.222	Propithecus_coquereli
ENSSMAG00000001546	rnaseh2b	76	51.271	ENSPVAG00000000508	RNASEH2B	88	51.271	Pteropus_vampyrus
ENSSMAG00000001546	rnaseh2b	100	81.046	ENSPNYG00000013552	rnaseh2b	100	81.046	Pundamilia_nyererei
ENSSMAG00000001546	rnaseh2b	99	68.627	ENSPNAG00000024825	rnaseh2b	99	68.627	Pygocentrus_nattereri
ENSSMAG00000001546	rnaseh2b	87	52.788	ENSRNOG00000009192	Rnaseh2b	87	52.788	Rattus_norvegicus
ENSSMAG00000001546	rnaseh2b	87	51.866	ENSRBIG00000028928	-	86	51.673	Rhinopithecus_bieti
ENSSMAG00000001546	rnaseh2b	86	47.710	ENSRBIG00000036017	-	86	47.710	Rhinopithecus_bieti
ENSSMAG00000001546	rnaseh2b	74	42.512	ENSRROG00000044915	-	80	42.180	Rhinopithecus_roxellana
ENSSMAG00000001546	rnaseh2b	87	51.866	ENSRROG00000018808	-	87	51.103	Rhinopithecus_roxellana
ENSSMAG00000001546	rnaseh2b	87	52.045	ENSSBOG00000008081	RNASEH2B	96	52.045	Saimiri_boliviensis_boliviensis
ENSSMAG00000001546	rnaseh2b	100	54.839	ENSSHAG00000016190	RNASEH2B	100	55.519	Sarcophilus_harrisii
ENSSMAG00000001546	rnaseh2b	99	70.261	ENSSFOG00015010190	rnaseh2b	100	70.261	Scleropages_formosus
ENSSMAG00000001546	rnaseh2b	100	88.562	ENSSDUG00000007567	rnaseh2b	100	88.562	Seriola_dumerili
ENSSMAG00000001546	rnaseh2b	100	86.601	ENSSLDG00000012485	rnaseh2b	100	86.601	Seriola_lalandi_dorsalis
ENSSMAG00000001546	rnaseh2b	84	54.826	ENSSPUG00000006745	-	93	54.826	Sphenodon_punctatus
ENSSMAG00000001546	rnaseh2b	100	85.357	ENSSPAG00000020926	rnaseh2b	100	85.357	Stegastes_partitus
ENSSMAG00000001546	rnaseh2b	87	52.416	ENSSSCG00000024385	RNASEH2B	96	54.656	Sus_scrofa
ENSSMAG00000001546	rnaseh2b	88	61.993	ENSTGUG00000012104	RNASEH2B	99	61.993	Taeniopygia_guttata
ENSSMAG00000001546	rnaseh2b	100	81.373	ENSTRUG00000015098	rnaseh2b	100	81.373	Takifugu_rubripes
ENSSMAG00000001546	rnaseh2b	100	78.247	ENSTNIG00000013861	rnaseh2b	100	78.247	Tetraodon_nigroviridis
ENSSMAG00000001546	rnaseh2b	87	44.610	ENSTTRG00000010761	RNASEH2B	87	45.353	Tursiops_truncatus
ENSSMAG00000001546	rnaseh2b	87	52.788	ENSUAMG00000022849	RNASEH2B	96	52.788	Ursus_americanus
ENSSMAG00000001546	rnaseh2b	87	51.866	ENSUMAG00000018556	RNASEH2B	96	52.045	Ursus_maritimus
ENSSMAG00000001546	rnaseh2b	87	53.358	ENSVPAG00000005679	RNASEH2B	92	53.358	Vicugna_pacos
ENSSMAG00000001546	rnaseh2b	87	51.866	ENSVVUG00000024015	RNASEH2B	80	52.612	Vulpes_vulpes
ENSSMAG00000001546	rnaseh2b	99	56.494	ENSXETG00000020720	rnaseh2b	100	56.494	Xenopus_tropicalis
ENSSMAG00000001546	rnaseh2b	100	80.065	ENSXCOG00000018732	rnaseh2b	100	80.065	Xiphophorus_couchianus
ENSSMAG00000001546	rnaseh2b	100	81.373	ENSXMAG00000022554	rnaseh2b	100	81.373	Xiphophorus_maculatus