EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000001653 (Gene tree)
Gene ID: -
Gene Symbol: cmss1
Alias: zgc:101814
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 30699 bases
Position: chr14:16087327-16118025
Accession: ZDB-GENE-041010-146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000002631	CMS1	PF14617.6	9.2e-34	1	1
ENSSMAP00000002631	DEAD	PF00270.29	2.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000002677	-	1901	-	ENSSMAP00000002631	291 (aa)	-	A0A2U9CC58

Gene Model

Click here to download ENSSMAG00000001653's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000001653's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000001653	cmss1	100	51.839	ENSG00000184220	CMSS1	98	63.750	Homo_sapiens
ENSSMAG00000001653	cmss1	82	76.151	ENSAPOG00000010604	cmss1	93	75.099	Acanthochromis_polyacanthus
ENSSMAG00000001653	cmss1	69	63.547	ENSAMEG00000004092	CMSS1	78	63.547	Ailuropoda_melanoleuca
ENSSMAG00000001653	cmss1	91	70.301	ENSACIG00000021854	cmss1	97	71.984	Amphilophus_citrinellus
ENSSMAG00000001653	cmss1	100	73.973	ENSAOCG00000013361	cmss1	100	75.945	Amphiprion_ocellaris
ENSSMAG00000001653	cmss1	100	70.790	ENSAPEG00000005829	cmss1	100	75.342	Amphiprion_percula
ENSSMAG00000001653	cmss1	100	74.658	ENSATEG00000008209	cmss1	100	76.370	Anabas_testudineus
ENSSMAG00000001653	cmss1	69	65.347	ENSAPLG00000010542	CMSS1	88	65.347	Anas_platyrhynchos
ENSSMAG00000001653	cmss1	69	64.356	ENSACAG00000011065	CMSS1	91	58.167	Anolis_carolinensis
ENSSMAG00000001653	cmss1	100	51.203	ENSANAG00000023565	CMSS1	100	51.020	Aotus_nancymaae
ENSSMAG00000001653	cmss1	100	74.490	ENSACLG00000027294	cmss1	100	75.000	Astatotilapia_calliptera
ENSSMAG00000001653	cmss1	100	56.803	ENSAMXG00000002046	cmss1	100	57.483	Astyanax_mexicanus
ENSSMAG00000001653	cmss1	100	52.318	ENSBTAG00000013663	CMSS1	100	53.265	Bos_taurus
ENSSMAG00000001653	cmss1	100	52.577	ENSCJAG00000000610	CMSS1	100	52.041	Callithrix_jacchus
ENSSMAG00000001653	cmss1	69	64.851	ENSCAFG00000009230	CMSS1	73	64.851	Canis_familiaris
ENSSMAG00000001653	cmss1	69	62.376	ENSCAFG00020024156	-	63	62.376	Canis_lupus_dingo
ENSSMAG00000001653	cmss1	69	64.851	ENSCAFG00020009464	-	74	64.851	Canis_lupus_dingo
ENSSMAG00000001653	cmss1	69	63.861	ENSCHIG00000013003	CMSS1	80	62.832	Capra_hircus
ENSSMAG00000001653	cmss1	77	60.889	ENSTSYG00000009266	CMSS1	85	60.889	Carlito_syrichta
ENSSMAG00000001653	cmss1	64	52.880	ENSCAPG00000013584	CMSS1	87	52.880	Cavia_aperea
ENSSMAG00000001653	cmss1	100	54.452	ENSCPOG00000014680	CMSS1	100	55.631	Cavia_porcellus
ENSSMAG00000001653	cmss1	100	53.265	ENSCCAG00000034685	CMSS1	100	53.265	Cebus_capucinus
ENSSMAG00000001653	cmss1	100	51.839	ENSCATG00000031980	CMSS1	100	51.203	Cercocebus_atys
ENSSMAG00000001653	cmss1	69	63.500	ENSCLAG00000011241	CMSS1	87	63.861	Chinchilla_lanigera
ENSSMAG00000001653	cmss1	69	63.861	ENSCSAG00000006024	CMSS1	82	63.861	Chlorocebus_sabaeus
ENSSMAG00000001653	cmss1	100	40.878	ENSCHOG00000012098	CMSS1	100	41.096	Choloepus_hoffmanni
ENSSMAG00000001653	cmss1	65	44.211	ENSCING00000014848	-	99	44.385	Ciona_intestinalis
ENSSMAG00000001653	cmss1	100	51.839	ENSCANG00000031337	CMSS1	100	51.546	Colobus_angolensis_palliatus
ENSSMAG00000001653	cmss1	100	50.000	ENSCGRG00001014305	Cmss1	100	51.546	Cricetulus_griseus_chok1gshd
ENSSMAG00000001653	cmss1	77	60.000	ENSCGRG00000006722	Cmss1	86	60.000	Cricetulus_griseus_crigri
ENSSMAG00000001653	cmss1	100	76.531	ENSCSEG00000004958	cmss1	100	76.531	Cynoglossus_semilaevis
ENSSMAG00000001653	cmss1	100	73.630	ENSCVAG00000005039	cmss1	100	73.630	Cyprinodon_variegatus
ENSSMAG00000001653	cmss1	100	58.844	ENSDARG00000112579	cmss1	100	59.589	Danio_rerio
ENSSMAG00000001653	cmss1	84	55.212	ENSDNOG00000040418	CMSS1	94	55.212	Dasypus_novemcinctus
ENSSMAG00000001653	cmss1	100	55.782	ENSDORG00000010461	Cmss1	100	56.271	Dipodomys_ordii
ENSSMAG00000001653	cmss1	69	62.500	ENSEASG00005010966	CMSS1	92	62.871	Equus_asinus_asinus
ENSSMAG00000001653	cmss1	69	62.000	ENSECAG00000015662	CMSS1	97	60.619	Equus_caballus
ENSSMAG00000001653	cmss1	100	37.415	ENSEEUG00000007624	-	100	36.770	Erinaceus_europaeus
ENSSMAG00000001653	cmss1	100	59.477	ENSELUG00000019459	cmss1	100	59.539	Esox_lucius
ENSSMAG00000001653	cmss1	100	53.952	ENSFCAG00000044577	CMSS1	100	54.452	Felis_catus
ENSSMAG00000001653	cmss1	69	64.356	ENSFALG00000005816	CMSS1	85	64.356	Ficedula_albicollis
ENSSMAG00000001653	cmss1	69	62.871	ENSFDAG00000012577	CMSS1	89	62.871	Fukomys_damarensis
ENSSMAG00000001653	cmss1	78	79.386	ENSFHEG00000012008	cmss1	93	80.088	Fundulus_heteroclitus
ENSSMAG00000001653	cmss1	99	66.327	ENSGMOG00000016729	cmss1	100	67.361	Gadus_morhua
ENSSMAG00000001653	cmss1	95	55.235	ENSGALG00000015267	CMSS1	77	66.337	Gallus_gallus
ENSSMAG00000001653	cmss1	92	70.909	ENSGAFG00000021217	cmss1	96	71.538	Gambusia_affinis
ENSSMAG00000001653	cmss1	99	70.588	ENSGACG00000002798	cmss1	100	70.486	Gasterosteus_aculeatus
ENSSMAG00000001653	cmss1	69	66.337	ENSGAGG00000019861	CMSS1	79	66.337	Gopherus_agassizii
ENSSMAG00000001653	cmss1	69	63.366	ENSGGOG00000014125	CMSS1	77	63.366	Gorilla_gorilla
ENSSMAG00000001653	cmss1	100	74.403	ENSHBUG00000008431	cmss1	100	74.570	Haplochromis_burtoni
ENSSMAG00000001653	cmss1	69	63.500	ENSHGLG00000019481	CMSS1	90	62.832	Heterocephalus_glaber_female
ENSSMAG00000001653	cmss1	69	63.500	ENSHGLG00100010314	CMSS1	89	62.832	Heterocephalus_glaber_male
ENSSMAG00000001653	cmss1	100	70.270	ENSHCOG00000003222	cmss1	100	69.932	Hippocampus_comes
ENSSMAG00000001653	cmss1	100	60.825	ENSIPUG00000011591	cmss1	100	61.168	Ictalurus_punctatus
ENSSMAG00000001653	cmss1	100	53.608	ENSSTOG00000019366	CMSS1	100	52.921	Ictidomys_tridecemlineatus
ENSSMAG00000001653	cmss1	100	51.667	ENSJJAG00000014894	Cmss1	99	58.190	Jaculus_jaculus
ENSSMAG00000001653	cmss1	92	63.941	ENSKMAG00000002390	cmss1	94	67.059	Kryptolebias_marmoratus
ENSSMAG00000001653	cmss1	91	71.375	ENSLBEG00000006298	cmss1	96	71.538	Labrus_bergylta
ENSSMAG00000001653	cmss1	69	64.851	ENSLACG00000009293	CMSS1	88	64.851	Latimeria_chalumnae
ENSSMAG00000001653	cmss1	100	54.639	ENSLOCG00000009391	cmss1	100	55.290	Lepisosteus_oculatus
ENSSMAG00000001653	cmss1	69	63.000	ENSLAFG00000017509	CMSS1	89	63.366	Loxodonta_africana
ENSSMAG00000001653	cmss1	100	51.505	ENSMFAG00000045006	CMSS1	100	50.859	Macaca_fascicularis
ENSSMAG00000001653	cmss1	100	51.171	ENSMMUG00000002939	CMSS1	100	50.515	Macaca_mulatta
ENSSMAG00000001653	cmss1	100	51.505	ENSMNEG00000031315	CMSS1	100	50.859	Macaca_nemestrina
ENSSMAG00000001653	cmss1	100	51.505	ENSMLEG00000033660	CMSS1	100	50.859	Mandrillus_leucophaeus
ENSSMAG00000001653	cmss1	100	77.133	ENSMAMG00000017176	cmss1	100	76.712	Mastacembelus_armatus
ENSSMAG00000001653	cmss1	100	74.490	ENSMZEG00005021886	cmss1	100	75.000	Maylandia_zebra
ENSSMAG00000001653	cmss1	69	66.337	ENSMGAG00000014360	CMSS1	89	66.337	Meleagris_gallopavo
ENSSMAG00000001653	cmss1	100	37.584	ENSMAUG00000020609	Cmss1	100	37.457	Mesocricetus_auratus
ENSSMAG00000001653	cmss1	100	55.326	ENSMICG00000048977	CMSS1	100	55.326	Microcebus_murinus
ENSSMAG00000001653	cmss1	100	52.218	ENSMOCG00000021937	Cmss1	100	51.195	Microtus_ochrogaster
ENSSMAG00000001653	cmss1	89	68.077	ENSMMOG00000019794	cmss1	98	68.462	Mola_mola
ENSSMAG00000001653	cmss1	92	54.104	ENSMODG00000002275	CMSS1	95	56.078	Monodelphis_domestica
ENSSMAG00000001653	cmss1	100	77.055	ENSMALG00000004250	cmss1	100	76.370	Monopterus_albus
ENSSMAG00000001653	cmss1	100	53.608	MGP_CAROLIEiJ_G0020824	Cmss1	100	52.381	Mus_caroli
ENSSMAG00000001653	cmss1	100	52.921	ENSMUSG00000022748	Cmss1	100	52.921	Mus_musculus
ENSSMAG00000001653	cmss1	100	52.921	MGP_PahariEiJ_G0016524	Cmss1	100	51.546	Mus_pahari
ENSSMAG00000001653	cmss1	100	53.242	MGP_SPRETEiJ_G0021724	Cmss1	100	51.361	Mus_spretus
ENSSMAG00000001653	cmss1	68	63.317	ENSMPUG00000011324	CMSS1	85	62.222	Mustela_putorius_furo
ENSSMAG00000001653	cmss1	69	63.366	ENSMLUG00000001131	CMSS1	85	62.281	Myotis_lucifugus
ENSSMAG00000001653	cmss1	100	52.234	ENSNGAG00000020316	Cmss1	100	52.234	Nannospalax_galili
ENSSMAG00000001653	cmss1	100	74.490	ENSNBRG00000003095	cmss1	100	74.658	Neolamprologus_brichardi
ENSSMAG00000001653	cmss1	100	52.508	ENSNLEG00000034172	CMSS1	100	51.546	Nomascus_leucogenys
ENSSMAG00000001653	cmss1	69	52.475	ENSMEUG00000014505	CMSS1	89	52.475	Notamacropus_eugenii
ENSSMAG00000001653	cmss1	100	53.265	ENSOPRG00000002986	CMSS1	100	53.265	Ochotona_princeps
ENSSMAG00000001653	cmss1	100	46.780	ENSODEG00000001853	-	100	46.622	Octodon_degus
ENSSMAG00000001653	cmss1	100	45.704	ENSODEG00000009446	-	100	45.361	Octodon_degus
ENSSMAG00000001653	cmss1	100	49.669	ENSODEG00000003558	-	100	50.172	Octodon_degus
ENSSMAG00000001653	cmss1	100	54.452	ENSODEG00000005226	-	100	54.949	Octodon_degus
ENSSMAG00000001653	cmss1	90	76.136	ENSONIG00000006678	cmss1	98	78.210	Oreochromis_niloticus
ENSSMAG00000001653	cmss1	80	59.244	ENSOANG00000007529	CMSS1	87	62.871	Ornithorhynchus_anatinus
ENSSMAG00000001653	cmss1	69	63.861	ENSOCUG00000025366	CMSS1	73	63.861	Oryctolagus_cuniculus
ENSSMAG00000001653	cmss1	100	72.165	ENSORLG00000020340	cmss1	100	71.478	Oryzias_latipes
ENSSMAG00000001653	cmss1	74	70.561	ENSORLG00020012235	cmss1	95	61.719	Oryzias_latipes_hni
ENSSMAG00000001653	cmss1	91	63.838	ENSORLG00015015551	cmss1	97	64.504	Oryzias_latipes_hsok
ENSSMAG00000001653	cmss1	100	71.088	ENSOMEG00000012555	cmss1	100	70.890	Oryzias_melastigma
ENSSMAG00000001653	cmss1	69	63.861	ENSOGAG00000002045	CMSS1	89	63.861	Otolemur_garnettii
ENSSMAG00000001653	cmss1	69	63.547	ENSOARG00000017899	CMSS1	76	62.555	Ovis_aries
ENSSMAG00000001653	cmss1	69	63.366	ENSPPAG00000038515	CMSS1	74	63.366	Pan_paniscus
ENSSMAG00000001653	cmss1	100	53.952	ENSPPRG00000016767	CMSS1	100	54.110	Panthera_pardus
ENSSMAG00000001653	cmss1	100	53.608	ENSPTIG00000018274	CMSS1	100	53.767	Panthera_tigris_altaica
ENSSMAG00000001653	cmss1	100	52.174	ENSPTRG00000015157	CMSS1	100	51.203	Pan_troglodytes
ENSSMAG00000001653	cmss1	69	63.861	ENSPANG00000019980	CMSS1	80	63.861	Papio_anubis
ENSSMAG00000001653	cmss1	96	61.071	ENSPKIG00000012609	cmss1	94	63.707	Paramormyrops_kingsleyae
ENSSMAG00000001653	cmss1	69	66.337	ENSPSIG00000003849	CMSS1	88	66.337	Pelodiscus_sinensis
ENSSMAG00000001653	cmss1	70	79.412	ENSPMGG00000010286	cmss1	88	79.412	Periophthalmus_magnuspinnatus
ENSSMAG00000001653	cmss1	100	50.671	ENSPEMG00000016384	Cmss1	100	50.671	Peromyscus_maniculatus_bairdii
ENSSMAG00000001653	cmss1	70	51.471	ENSPMAG00000001146	cmss1	99	51.724	Petromyzon_marinus
ENSSMAG00000001653	cmss1	69	62.871	ENSPCIG00000015656	CMSS1	77	62.871	Phascolarctos_cinereus
ENSSMAG00000001653	cmss1	100	77.055	ENSPFOG00000016849	cmss1	100	75.342	Poecilia_formosa
ENSSMAG00000001653	cmss1	100	76.712	ENSPLAG00000008323	cmss1	100	75.000	Poecilia_latipinna
ENSSMAG00000001653	cmss1	100	76.712	ENSPMEG00000021020	cmss1	100	75.685	Poecilia_mexicana
ENSSMAG00000001653	cmss1	90	76.806	ENSPREG00000007618	cmss1	87	77.734	Poecilia_reticulata
ENSSMAG00000001653	cmss1	100	50.515	ENSPPYG00000013606	CMSS1	100	51.546	Pongo_abelii
ENSSMAG00000001653	cmss1	100	54.795	ENSPCOG00000020035	CMSS1	100	53.559	Propithecus_coquereli
ENSSMAG00000001653	cmss1	100	45.361	ENSPVAG00000017031	CMSS1	100	45.704	Pteropus_vampyrus
ENSSMAG00000001653	cmss1	91	75.373	ENSPNYG00000013428	cmss1	97	75.188	Pundamilia_nyererei
ENSSMAG00000001653	cmss1	100	60.544	ENSPNAG00000007912	cmss1	100	60.204	Pygocentrus_nattereri
ENSSMAG00000001653	cmss1	69	62.871	ENSRNOG00000027888	Cmss1	79	62.871	Rattus_norvegicus
ENSSMAG00000001653	cmss1	100	51.505	ENSRBIG00000037931	CMSS1	100	50.515	Rhinopithecus_bieti
ENSSMAG00000001653	cmss1	100	51.505	ENSRROG00000042910	CMSS1	100	50.515	Rhinopithecus_roxellana
ENSSMAG00000001653	cmss1	83	59.091	ENSSBOG00000030980	CMSS1	91	59.091	Saimiri_boliviensis_boliviensis
ENSSMAG00000001653	cmss1	69	64.356	ENSSHAG00000009321	CMSS1	80	64.356	Sarcophilus_harrisii
ENSSMAG00000001653	cmss1	100	61.644	ENSSFOG00015001509	cmss1	100	62.925	Scleropages_formosus
ENSSMAG00000001653	cmss1	100	83.162	ENSSDUG00000007719	cmss1	100	82.818	Seriola_dumerili
ENSSMAG00000001653	cmss1	90	78.889	ENSSLDG00000012300	cmss1	90	78.195	Seriola_lalandi_dorsalis
ENSSMAG00000001653	cmss1	100	44.330	ENSSARG00000003584	CMSS1	100	43.537	Sorex_araneus
ENSSMAG00000001653	cmss1	69	62.871	ENSSPUG00000003865	CMSS1	89	62.871	Sphenodon_punctatus
ENSSMAG00000001653	cmss1	94	76.812	ENSSPAG00000019182	cmss1	76	77.907	Stegastes_partitus
ENSSMAG00000001653	cmss1	100	51.890	ENSSSCG00000011970	CMSS1	100	52.234	Sus_scrofa
ENSSMAG00000001653	cmss1	74	62.162	ENSTGUG00000013635	CMSS1	88	64.356	Taeniopygia_guttata
ENSSMAG00000001653	cmss1	100	67.354	ENSTRUG00000015265	cmss1	100	69.759	Takifugu_rubripes
ENSSMAG00000001653	cmss1	93	61.255	ENSTNIG00000002880	cmss1	92	65.504	Tetraodon_nigroviridis
ENSSMAG00000001653	cmss1	100	37.113	ENSTBEG00000016722	CMSS1	100	38.014	Tupaia_belangeri
ENSSMAG00000001653	cmss1	100	53.425	ENSTTRG00000001562	CMSS1	100	54.266	Tursiops_truncatus
ENSSMAG00000001653	cmss1	69	64.356	ENSUAMG00000024209	CMSS1	91	64.356	Ursus_americanus
ENSSMAG00000001653	cmss1	69	63.861	ENSUMAG00000001983	CMSS1	78	63.861	Ursus_maritimus
ENSSMAG00000001653	cmss1	55	61.875	ENSVPAG00000000263	CMSS1	57	61.875	Vicugna_pacos
ENSSMAG00000001653	cmss1	69	64.500	ENSVVUG00000021647	-	82	64.851	Vulpes_vulpes
ENSSMAG00000001653	cmss1	69	63.861	ENSVVUG00000007776	-	80	63.861	Vulpes_vulpes
ENSSMAG00000001653	cmss1	100	51.546	ENSXETG00000011858	cmss1	100	51.546	Xenopus_tropicalis
ENSSMAG00000001653	cmss1	94	72.000	ENSXCOG00000018724	cmss1	88	73.930	Xiphophorus_couchianus
ENSSMAG00000001653	cmss1	92	72.491	ENSXMAG00000011243	cmss1	96	73.930	Xiphophorus_maculatus