EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000001707 (Gene tree)
Gene ID: -
Gene Symbol: srsf4
Alias: sfrs4|wu:fb37e02|wu:fj35e06|zgc:152957|zgc:55809
Full Name: serine/arginine-rich splicing factor 4
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 4459 bases
Position: chr22:5469937-5474395
Accession: ZDB-GENE-030131-591
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000002755	RRM_1	PF00076.22	5.3e-31	1	2
ENSSMAP00000002755	RRM_1	PF00076.22	5.3e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000002804	-	1098	-	ENSSMAP00000002755	365 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000001707's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000001707's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000001707	srsf4	50	72.928	ENSSMAG00000017447	-	55	73.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000001707	srsf4	50	76.243	ENSAPOG00000023399	-	60	76.243	Acanthochromis_polyacanthus
ENSSMAG00000001707	srsf4	50	92.391	ENSACIG00000018649	srsf4	90	91.339	Amphilophus_citrinellus
ENSSMAG00000001707	srsf4	76	67.742	ENSACLG00000003395	srsf4	68	98.780	Astatotilapia_calliptera
ENSSMAG00000001707	srsf4	50	88.587	ENSAMXG00000034811	srsf4	70	91.549	Astyanax_mexicanus
ENSSMAG00000001707	srsf4	98	60.656	ENSCHIG00000022096	SRSF4	74	63.192	Capra_hircus
ENSSMAG00000001707	srsf4	58	51.739	ENSCING00000012370	-	97	51.307	Ciona_intestinalis
ENSSMAG00000001707	srsf4	50	59.794	ENSCING00000020631	-	81	60.204	Ciona_intestinalis
ENSSMAG00000001707	srsf4	53	56.436	ENSCING00000011362	-	65	58.065	Ciona_intestinalis
ENSSMAG00000001707	srsf4	66	95.588	ENSCSEG00000010058	srsf4	83	95.588	Cynoglossus_semilaevis
ENSSMAG00000001707	srsf4	50	83.784	ENSDARG00000105293	srsf4	66	94.286	Danio_rerio
ENSSMAG00000001707	srsf4	50	62.983	ENSEBUG00000001681	srsf4	67	60.773	Eptatretus_burgeri
ENSSMAG00000001707	srsf4	73	69.333	ENSGMOG00000012906	srsf4	57	88.649	Gadus_morhua
ENSSMAG00000001707	srsf4	50	94.054	ENSGAFG00000018496	srsf4	66	84.409	Gambusia_affinis
ENSSMAG00000001707	srsf4	57	82.143	ENSGACG00000002389	srsf4	56	92.432	Gasterosteus_aculeatus
ENSSMAG00000001707	srsf4	50	76.923	ENSHBUG00000011326	-	51	76.923	Haplochromis_burtoni
ENSSMAG00000001707	srsf4	69	98.485	ENSHCOG00000012540	srsf4	69	93.011	Hippocampus_comes
ENSSMAG00000001707	srsf4	50	90.270	ENSKMAG00000013631	srsf4	82	80.374	Kryptolebias_marmoratus
ENSSMAG00000001707	srsf4	84	81.433	ENSMAMG00000004888	srsf4	81	95.588	Mastacembelus_armatus
ENSSMAG00000001707	srsf4	76	67.742	ENSMZEG00005026275	srsf4	68	98.780	Maylandia_zebra
ENSSMAG00000001707	srsf4	63	94.203	ENSMMOG00000013653	srsf4	76	95.588	Mola_mola
ENSSMAG00000001707	srsf4	50	86.264	ENSMODG00000011052	SRSF4	56	84.324	Monodelphis_domestica
ENSSMAG00000001707	srsf4	84	85.778	ENSMALG00000013392	srsf4	87	89.730	Monopterus_albus
ENSSMAG00000001707	srsf4	50	69.189	ENSNLEG00000030787	-	62	68.649	Nomascus_leucogenys
ENSSMAG00000001707	srsf4	51	87.568	ENSORLG00020016052	srsf4	67	94.086	Oryzias_latipes_hni
ENSSMAG00000001707	srsf4	58	82.569	ENSORLG00015007566	srsf4	71	94.086	Oryzias_latipes_hsok
ENSSMAG00000001707	srsf4	51	90.811	ENSOMEG00000005541	srsf4	51	93.548	Oryzias_melastigma
ENSSMAG00000001707	srsf4	74	68.841	ENSPMGG00000013436	srsf4	95	91.339	Periophthalmus_magnuspinnatus
ENSSMAG00000001707	srsf4	70	54.212	ENSPMAG00000009397	srsf4	68	64.516	Petromyzon_marinus
ENSSMAG00000001707	srsf4	50	94.054	ENSPLAG00000008812	srsf4	65	81.915	Poecilia_latipinna
ENSSMAG00000001707	srsf4	50	94.086	ENSPMEG00000023638	srsf4	53	91.489	Poecilia_mexicana
ENSSMAG00000001707	srsf4	99	65.659	ENSPREG00000009639	srsf4	51	92.473	Poecilia_reticulata
ENSSMAG00000001707	srsf4	50	92.391	ENSPNYG00000003796	srsf4	57	94.086	Pundamilia_nyererei
ENSSMAG00000001707	srsf4	50	88.950	ENSSFOG00015020292	srsf4	72	97.403	Scleropages_formosus
ENSSMAG00000001707	srsf4	84	72.293	ENSSDUG00000007387	srsf4	84	73.926	Seriola_dumerili
ENSSMAG00000001707	srsf4	50	77.297	ENSSLDG00000009745	srsf4	62	76.882	Seriola_lalandi_dorsalis
ENSSMAG00000001707	srsf4	82	94.203	ENSSPAG00000014538	srsf4	83	91.270	Stegastes_partitus
ENSSMAG00000001707	srsf4	76	69.930	ENSTRUG00000011891	srsf4	97	74.309	Takifugu_rubripes
ENSSMAG00000001707	srsf4	50	94.054	ENSXCOG00000018826	srsf4	89	91.667	Xiphophorus_couchianus
ENSSMAG00000001707	srsf4	50	74.468	ENSXCOG00000003212	-	55	73.404	Xiphophorus_couchianus