EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000001797 (Gene tree)
Gene ID: -
Gene Symbol: opa1
Alias: fk62d06|wu:fb77a10|wu:fk62d06|zgc:92092
Full Name: optic atrophy 1 (autosomal dominant)
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 21719 bases
Position: chr12:10794805-10816523
Accession: ZDB-GENE-041114-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000002956	MMR_HSR1	PF01926.23	3.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000003006	-	2769	-	ENSSMAP00000002956	922 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000001797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000001797's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000001797	opa1	97	96.185	ENSAPOG00000011980	opa1	94	95.490	Acanthochromis_polyacanthus
ENSSMAG00000001797	opa1	96	93.672	ENSACIG00000012521	opa1	95	93.672	Amphilophus_citrinellus
ENSSMAG00000001797	opa1	97	95.640	ENSAOCG00000020559	opa1	96	94.927	Amphiprion_ocellaris
ENSSMAG00000001797	opa1	96	92.559	ENSAPEG00000001641	opa1	97	90.568	Amphiprion_percula
ENSSMAG00000001797	opa1	96	91.094	ENSAMXG00000012295	opa1	99	90.868	Astyanax_mexicanus
ENSSMAG00000001797	opa1	90	51.932	WBGene00001134	eat-3	91	51.986	Caenorhabditis_elegans
ENSSMAG00000001797	opa1	96	89.213	ENSCSEG00000014266	opa1	94	89.213	Cynoglossus_semilaevis
ENSSMAG00000001797	opa1	97	94.687	ENSCVAG00000002438	opa1	95	91.602	Cyprinodon_variegatus
ENSSMAG00000001797	opa1	97	87.059	ENSDARG00000070801	opa1	97	86.845	Danio_rerio
ENSSMAG00000001797	opa1	91	55.000	FBgn0261276	Opa1	86	59.669	Drosophila_melanogaster
ENSSMAG00000001797	opa1	96	90.508	ENSFHEG00000003616	opa1	95	90.508	Fundulus_heteroclitus
ENSSMAG00000001797	opa1	97	91.426	ENSGACG00000009278	opa1	97	91.426	Gasterosteus_aculeatus
ENSSMAG00000001797	opa1	97	89.711	ENSHBUG00000005897	opa1	99	89.711	Haplochromis_burtoni
ENSSMAG00000001797	opa1	97	92.248	ENSHCOG00000016756	opa1	96	92.248	Hippocampus_comes
ENSSMAG00000001797	opa1	78	96.384	ENSKMAG00000009415	opa1	92	96.384	Kryptolebias_marmoratus
ENSSMAG00000001797	opa1	97	88.999	ENSMMOG00000008891	opa1	96	89.219	Mola_mola
ENSSMAG00000001797	opa1	97	93.733	ENSMALG00000016968	opa1	97	86.961	Monopterus_albus
ENSSMAG00000001797	opa1	96	94.124	ENSNBRG00000020394	opa1	95	94.124	Neolamprologus_brichardi
ENSSMAG00000001797	opa1	96	91.504	ENSPKIG00000003379	opa1	87	91.504	Paramormyrops_kingsleyae
ENSSMAG00000001797	opa1	97	76.327	ENSPKIG00000006473	OPA1	96	76.327	Paramormyrops_kingsleyae
ENSSMAG00000001797	opa1	96	93.898	ENSPNYG00000021747	opa1	95	93.898	Pundamilia_nyererei
ENSSMAG00000001797	opa1	96	91.883	ENSPNAG00000001917	opa1	96	91.657	Pygocentrus_nattereri
ENSSMAG00000001797	opa1	91	94.398	ENSSFOG00015009303	OPA1	95	83.226	Scleropages_formosus
ENSSMAG00000001797	opa1	76	94.074	ENSSDUG00000004968	opa1	99	94.074	Seriola_dumerili
ENSSMAG00000001797	opa1	97	96.049	ENSSLDG00000011089	opa1	88	96.049	Seriola_lalandi_dorsalis
ENSSMAG00000001797	opa1	97	91.747	ENSSPAG00000018388	opa1	97	91.747	Stegastes_partitus
ENSSMAG00000001797	opa1	76	90.096	ENSXCOG00000003267	opa1	90	90.096	Xiphophorus_couchianus
ENSSMAG00000001797	opa1	78	95.404	ENSXMAG00000005593	opa1	96	95.404	Xiphophorus_maculatus