EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000002001 (Gene tree)
Gene ID: -
Gene Symbol: cpsf2
Alias: zgc:92484
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 10021 bases
Position: chr20:15750931-15760951
Accession: ZDB-GENE-040718-79
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000003224	Beta-Casp	PF10996.8	4e-21	1	1
ENSSMAP00000003224	Lactamase_B	PF00753.27	4.6e-05	1	1
ENSSMAP00000003224	RMMBL	PF07521.12	2.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000003280	-	5311	-	ENSSMAP00000003224	788 (aa)	-	A0A2U9CWB0

Gene Model

Click here to download ENSSMAG00000002001's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000002001's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000002001	cpsf2	100	84.030	ENSG00000165934	CPSF2	100	87.500	Homo_sapiens
ENSSMAG00000002001	cpsf2	100	95.305	ENSAPOG00000001242	cpsf2	100	94.543	Acanthochromis_polyacanthus
ENSSMAG00000002001	cpsf2	100	94.677	ENSACIG00000009331	cpsf2	100	93.916	Amphilophus_citrinellus
ENSSMAG00000002001	cpsf2	100	95.939	ENSAOCG00000014095	cpsf2	100	95.051	Amphiprion_ocellaris
ENSSMAG00000002001	cpsf2	100	95.939	ENSAPEG00000009158	cpsf2	100	95.051	Amphiprion_percula
ENSSMAG00000002001	cpsf2	96	94.466	ENSATEG00000017644	cpsf2	99	92.462	Anabas_testudineus
ENSSMAG00000002001	cpsf2	100	84.576	ENSAPLG00000006330	CPSF2	100	83.753	Anas_platyrhynchos
ENSSMAG00000002001	cpsf2	100	83.904	ENSACAG00000009245	CPSF2	100	83.904	Anolis_carolinensis
ENSSMAG00000002001	cpsf2	100	84.284	ENSANAG00000022915	CPSF2	100	84.284	Aotus_nancymaae
ENSSMAG00000002001	cpsf2	100	89.227	ENSAMXG00000018696	cpsf2	100	89.227	Astyanax_mexicanus
ENSSMAG00000002001	cpsf2	100	84.157	ENSBTAG00000010227	CPSF2	100	84.157	Bos_taurus
ENSSMAG00000002001	cpsf2	100	41.315	WBGene00017313	cpsf-2	79	44.313	Caenorhabditis_elegans
ENSSMAG00000002001	cpsf2	100	84.284	ENSCJAG00000018069	CPSF2	100	84.284	Callithrix_jacchus
ENSSMAG00000002001	cpsf2	100	84.157	ENSCAFG00000010909	CPSF2	100	84.157	Canis_familiaris
ENSSMAG00000002001	cpsf2	100	84.157	ENSCAFG00020020670	CPSF2	100	84.157	Canis_lupus_dingo
ENSSMAG00000002001	cpsf2	100	84.157	ENSCHIG00000023848	CPSF2	100	84.157	Capra_hircus
ENSSMAG00000002001	cpsf2	100	84.157	ENSTSYG00000009036	CPSF2	100	84.157	Carlito_syrichta
ENSSMAG00000002001	cpsf2	100	84.157	ENSCPOG00000010899	CPSF2	100	84.157	Cavia_porcellus
ENSSMAG00000002001	cpsf2	100	84.284	ENSCCAG00000028088	CPSF2	100	84.284	Cebus_capucinus
ENSSMAG00000002001	cpsf2	100	84.157	ENSCATG00000030132	CPSF2	100	84.157	Cercocebus_atys
ENSSMAG00000002001	cpsf2	100	84.157	ENSCLAG00000012404	CPSF2	100	84.157	Chinchilla_lanigera
ENSSMAG00000002001	cpsf2	100	84.157	ENSCSAG00000011300	CPSF2	100	84.157	Chlorocebus_sabaeus
ENSSMAG00000002001	cpsf2	100	78.961	ENSCHOG00000012904	CPSF2	100	78.961	Choloepus_hoffmanni
ENSSMAG00000002001	cpsf2	100	85.425	ENSCPBG00000008766	CPSF2	97	84.918	Chrysemys_picta_bellii
ENSSMAG00000002001	cpsf2	100	53.094	ENSCING00000007881	-	100	52.795	Ciona_intestinalis
ENSSMAG00000002001	cpsf2	94	84.054	ENSCANG00000041651	CPSF2	100	84.032	Colobus_angolensis_palliatus
ENSSMAG00000002001	cpsf2	100	83.650	ENSCGRG00001006901	Cpsf2	100	83.650	Cricetulus_griseus_chok1gshd
ENSSMAG00000002001	cpsf2	100	83.650	ENSCGRG00000012416	Cpsf2	100	83.650	Cricetulus_griseus_crigri
ENSSMAG00000002001	cpsf2	100	93.409	ENSCSEG00000004116	cpsf2	100	92.893	Cynoglossus_semilaevis
ENSSMAG00000002001	cpsf2	100	93.909	ENSCVAG00000000095	cpsf2	100	93.274	Cyprinodon_variegatus
ENSSMAG00000002001	cpsf2	100	87.722	ENSDARG00000028971	cpsf2	100	87.468	Danio_rerio
ENSSMAG00000002001	cpsf2	100	84.157	ENSDNOG00000042757	CPSF2	100	84.157	Dasypus_novemcinctus
ENSSMAG00000002001	cpsf2	100	84.157	ENSDORG00000013709	Cpsf2	100	84.157	Dipodomys_ordii
ENSSMAG00000002001	cpsf2	100	52.723	FBgn0027873	Cpsf100	100	52.404	Drosophila_melanogaster
ENSSMAG00000002001	cpsf2	100	76.582	ENSETEG00000012123	CPSF2	100	76.582	Echinops_telfairi
ENSSMAG00000002001	cpsf2	53	75.060	ENSEBUG00000012098	cpsf2	95	75.060	Eptatretus_burgeri
ENSSMAG00000002001	cpsf2	89	90.444	ENSEASG00005021193	CPSF2	100	90.444	Equus_asinus_asinus
ENSSMAG00000002001	cpsf2	100	84.030	ENSECAG00000023935	CPSF2	100	84.030	Equus_caballus
ENSSMAG00000002001	cpsf2	100	89.698	ENSELUG00000008442	cpsf2	100	89.322	Esox_lucius
ENSSMAG00000002001	cpsf2	100	84.030	ENSFCAG00000007886	CPSF2	100	84.030	Felis_catus
ENSSMAG00000002001	cpsf2	100	84.918	ENSFALG00000002412	CPSF2	100	83.965	Ficedula_albicollis
ENSSMAG00000002001	cpsf2	100	84.030	ENSFDAG00000006327	CPSF2	100	84.030	Fukomys_damarensis
ENSSMAG00000002001	cpsf2	96	92.670	ENSFHEG00000015465	cpsf2	98	92.923	Fundulus_heteroclitus
ENSSMAG00000002001	cpsf2	100	89.811	ENSGMOG00000008761	cpsf2	100	90.013	Gadus_morhua
ENSSMAG00000002001	cpsf2	100	84.284	ENSGALG00000010783	CPSF2	100	84.343	Gallus_gallus
ENSSMAG00000002001	cpsf2	100	94.416	ENSGAFG00000001407	cpsf2	100	93.528	Gambusia_affinis
ENSSMAG00000002001	cpsf2	100	95.685	ENSGACG00000008418	cpsf2	100	94.924	Gasterosteus_aculeatus
ENSSMAG00000002001	cpsf2	100	85.298	ENSGAGG00000008287	CPSF2	100	84.791	Gopherus_agassizii
ENSSMAG00000002001	cpsf2	100	84.030	ENSGGOG00000011799	CPSF2	100	84.030	Gorilla_gorilla
ENSSMAG00000002001	cpsf2	100	93.909	ENSHBUG00000023466	cpsf2	100	93.274	Haplochromis_burtoni
ENSSMAG00000002001	cpsf2	100	84.157	ENSHGLG00000018311	CPSF2	100	84.157	Heterocephalus_glaber_female
ENSSMAG00000002001	cpsf2	100	84.157	ENSHGLG00100016460	CPSF2	100	84.157	Heterocephalus_glaber_male
ENSSMAG00000002001	cpsf2	100	93.147	ENSHCOG00000019527	cpsf2	98	92.640	Hippocampus_comes
ENSSMAG00000002001	cpsf2	100	89.861	ENSIPUG00000020857	cpsf2	100	89.861	Ictalurus_punctatus
ENSSMAG00000002001	cpsf2	100	84.284	ENSSTOG00000009528	CPSF2	100	84.284	Ictidomys_tridecemlineatus
ENSSMAG00000002001	cpsf2	100	84.030	ENSJJAG00000017925	Cpsf2	100	84.030	Jaculus_jaculus
ENSSMAG00000002001	cpsf2	100	93.020	ENSKMAG00000019429	cpsf2	100	92.132	Kryptolebias_marmoratus
ENSSMAG00000002001	cpsf2	95	94.913	ENSLBEG00000011585	cpsf2	100	94.779	Labrus_bergylta
ENSSMAG00000002001	cpsf2	100	82.890	ENSLACG00000019024	CPSF2	100	82.763	Latimeria_chalumnae
ENSSMAG00000002001	cpsf2	100	88.354	ENSLOCG00000014102	cpsf2	100	88.354	Lepisosteus_oculatus
ENSSMAG00000002001	cpsf2	100	83.818	ENSLAFG00000004891	CPSF2	100	83.818	Loxodonta_africana
ENSSMAG00000002001	cpsf2	100	84.157	ENSMFAG00000041212	CPSF2	100	84.157	Macaca_fascicularis
ENSSMAG00000002001	cpsf2	100	84.157	ENSMMUG00000000699	CPSF2	100	84.157	Macaca_mulatta
ENSSMAG00000002001	cpsf2	100	84.157	ENSMNEG00000031584	CPSF2	100	84.157	Macaca_nemestrina
ENSSMAG00000002001	cpsf2	100	84.157	ENSMLEG00000029394	CPSF2	100	84.157	Mandrillus_leucophaeus
ENSSMAG00000002001	cpsf2	100	95.051	ENSMAMG00000004235	cpsf2	100	94.289	Mastacembelus_armatus
ENSSMAG00000002001	cpsf2	100	93.909	ENSMZEG00005001769	cpsf2	100	93.147	Maylandia_zebra
ENSSMAG00000002001	cpsf2	100	84.051	ENSMGAG00000013122	CPSF2	100	84.111	Meleagris_gallopavo
ENSSMAG00000002001	cpsf2	100	83.650	ENSMAUG00000015160	Cpsf2	100	83.650	Mesocricetus_auratus
ENSSMAG00000002001	cpsf2	100	84.157	ENSMICG00000016441	CPSF2	100	84.157	Microcebus_murinus
ENSSMAG00000002001	cpsf2	100	83.650	ENSMOCG00000015372	Cpsf2	100	83.650	Microtus_ochrogaster
ENSSMAG00000002001	cpsf2	100	89.594	ENSMMOG00000015590	cpsf2	100	89.467	Mola_mola
ENSSMAG00000002001	cpsf2	100	84.411	ENSMODG00000002042	CPSF2	100	84.411	Monodelphis_domestica
ENSSMAG00000002001	cpsf2	100	91.371	ENSMALG00000022275	cpsf2	100	91.371	Monopterus_albus
ENSSMAG00000002001	cpsf2	100	83.650	ENSMUSG00000041781	Cpsf2	100	83.650	Mus_musculus
ENSSMAG00000002001	cpsf2	100	83.777	MGP_PahariEiJ_G0029791	Cpsf2	100	83.777	Mus_pahari
ENSSMAG00000002001	cpsf2	100	83.650	MGP_SPRETEiJ_G0018877	Cpsf2	100	83.650	Mus_spretus
ENSSMAG00000002001	cpsf2	100	84.157	ENSMPUG00000007617	CPSF2	98	84.157	Mustela_putorius_furo
ENSSMAG00000002001	cpsf2	100	83.904	ENSMLUG00000005570	CPSF2	100	83.904	Myotis_lucifugus
ENSSMAG00000002001	cpsf2	100	83.904	ENSNGAG00000020312	Cpsf2	100	83.904	Nannospalax_galili
ENSSMAG00000002001	cpsf2	100	94.162	ENSNBRG00000022402	cpsf2	100	93.401	Neolamprologus_brichardi
ENSSMAG00000002001	cpsf2	100	83.270	ENSNLEG00000017132	CPSF2	100	83.270	Nomascus_leucogenys
ENSSMAG00000002001	cpsf2	91	93.204	ENSMEUG00000008138	CPSF2	91	93.204	Notamacropus_eugenii
ENSSMAG00000002001	cpsf2	86	87.562	ENSOPRG00000008484	-	92	87.458	Ochotona_princeps
ENSSMAG00000002001	cpsf2	100	83.904	ENSODEG00000008682	CPSF2	100	83.904	Octodon_degus
ENSSMAG00000002001	cpsf2	100	93.909	ENSONIG00000005901	cpsf2	100	93.147	Oreochromis_niloticus
ENSSMAG00000002001	cpsf2	100	84.664	ENSOANG00000003822	CPSF2	100	84.284	Ornithorhynchus_anatinus
ENSSMAG00000002001	cpsf2	100	84.157	ENSOCUG00000005713	CPSF2	100	84.157	Oryctolagus_cuniculus
ENSSMAG00000002001	cpsf2	100	87.183	ENSORLG00000011628	cpsf2	100	86.802	Oryzias_latipes
ENSSMAG00000002001	cpsf2	100	93.020	ENSORLG00020016980	cpsf2	100	92.640	Oryzias_latipes_hni
ENSSMAG00000002001	cpsf2	100	93.020	ENSORLG00015011910	cpsf2	100	92.640	Oryzias_latipes_hsok
ENSSMAG00000002001	cpsf2	100	93.274	ENSOMEG00000022876	cpsf2	100	93.274	Oryzias_melastigma
ENSSMAG00000002001	cpsf2	100	81.163	ENSOARG00000012889	CPSF2	100	81.163	Ovis_aries
ENSSMAG00000002001	cpsf2	100	84.030	ENSPPAG00000039666	CPSF2	100	84.030	Pan_paniscus
ENSSMAG00000002001	cpsf2	99	84.010	ENSPPRG00000010869	CPSF2	100	84.010	Panthera_pardus
ENSSMAG00000002001	cpsf2	100	84.030	ENSPTIG00000021202	CPSF2	100	84.030	Panthera_tigris_altaica
ENSSMAG00000002001	cpsf2	100	84.030	ENSPTRG00000006651	CPSF2	100	84.030	Pan_troglodytes
ENSSMAG00000002001	cpsf2	100	84.157	ENSPANG00000017417	CPSF2	100	84.157	Papio_anubis
ENSSMAG00000002001	cpsf2	100	84.430	ENSPKIG00000021453	cpsf2	100	84.030	Paramormyrops_kingsleyae
ENSSMAG00000002001	cpsf2	100	85.044	ENSPSIG00000006289	CPSF2	100	84.537	Pelodiscus_sinensis
ENSSMAG00000002001	cpsf2	76	88.000	ENSPMGG00000002511	cpsf2	99	88.000	Periophthalmus_magnuspinnatus
ENSSMAG00000002001	cpsf2	100	83.777	ENSPEMG00000007917	Cpsf2	100	83.777	Peromyscus_maniculatus_bairdii
ENSSMAG00000002001	cpsf2	100	72.180	ENSPMAG00000006205	cpsf2	100	72.534	Petromyzon_marinus
ENSSMAG00000002001	cpsf2	100	84.411	ENSPCIG00000011393	CPSF2	100	84.411	Phascolarctos_cinereus
ENSSMAG00000002001	cpsf2	100	94.416	ENSPFOG00000018648	cpsf2	100	93.528	Poecilia_formosa
ENSSMAG00000002001	cpsf2	100	94.416	ENSPLAG00000019199	cpsf2	99	93.528	Poecilia_latipinna
ENSSMAG00000002001	cpsf2	96	94.459	ENSPMEG00000012100	cpsf2	100	93.173	Poecilia_mexicana
ENSSMAG00000002001	cpsf2	100	93.782	ENSPREG00000008960	cpsf2	100	93.020	Poecilia_reticulata
ENSSMAG00000002001	cpsf2	64	79.125	ENSPPYG00000029685	-	100	79.125	Pongo_abelii
ENSSMAG00000002001	cpsf2	100	84.030	ENSPCAG00000012477	CPSF2	100	84.030	Procavia_capensis
ENSSMAG00000002001	cpsf2	100	84.557	ENSPCOG00000026387	CPSF2	100	84.157	Propithecus_coquereli
ENSSMAG00000002001	cpsf2	64	90.306	ENSPVAG00000004223	CPSF2	65	90.306	Pteropus_vampyrus
ENSSMAG00000002001	cpsf2	100	93.536	ENSPNYG00000023356	cpsf2	100	92.776	Pundamilia_nyererei
ENSSMAG00000002001	cpsf2	100	90.241	ENSPNAG00000001849	cpsf2	100	90.241	Pygocentrus_nattereri
ENSSMAG00000002001	cpsf2	100	83.650	ENSRNOG00000005733	Cpsf2	100	83.650	Rattus_norvegicus
ENSSMAG00000002001	cpsf2	100	84.157	ENSRBIG00000044792	CPSF2	100	84.157	Rhinopithecus_bieti
ENSSMAG00000002001	cpsf2	100	84.157	ENSRROG00000034875	CPSF2	100	84.157	Rhinopithecus_roxellana
ENSSMAG00000002001	cpsf2	100	84.284	ENSSBOG00000024571	CPSF2	100	84.284	Saimiri_boliviensis_boliviensis
ENSSMAG00000002001	cpsf2	100	84.411	ENSSHAG00000010458	CPSF2	100	84.411	Sarcophilus_harrisii
ENSSMAG00000002001	cpsf2	100	90.241	ENSSFOG00015002117	cpsf2	100	90.241	Scleropages_formosus
ENSSMAG00000002001	cpsf2	100	96.066	ENSSDUG00000004084	cpsf2	100	95.305	Seriola_dumerili
ENSSMAG00000002001	cpsf2	100	95.939	ENSSLDG00000024330	cpsf2	100	95.178	Seriola_lalandi_dorsalis
ENSSMAG00000002001	cpsf2	58	95.050	ENSSARG00000009784	-	63	95.050	Sorex_araneus
ENSSMAG00000002001	cpsf2	100	85.171	ENSSPUG00000013485	CPSF2	100	84.664	Sphenodon_punctatus
ENSSMAG00000002001	cpsf2	100	95.178	ENSSPAG00000013284	cpsf2	100	94.289	Stegastes_partitus
ENSSMAG00000002001	cpsf2	100	84.030	ENSSSCG00000002447	CPSF2	100	84.030	Sus_scrofa
ENSSMAG00000002001	cpsf2	100	84.791	ENSTGUG00000012571	-	100	83.838	Taeniopygia_guttata
ENSSMAG00000002001	cpsf2	100	92.893	ENSTRUG00000003742	cpsf2	100	92.259	Takifugu_rubripes
ENSSMAG00000002001	cpsf2	100	92.532	ENSTNIG00000012228	cpsf2	100	91.899	Tetraodon_nigroviridis
ENSSMAG00000002001	cpsf2	91	82.174	ENSTBEG00000004530	CPSF2	88	86.385	Tupaia_belangeri
ENSSMAG00000002001	cpsf2	88	87.500	ENSTTRG00000008697	CPSF2	88	87.500	Tursiops_truncatus
ENSSMAG00000002001	cpsf2	100	84.157	ENSUAMG00000028071	CPSF2	100	84.157	Ursus_americanus
ENSSMAG00000002001	cpsf2	100	84.157	ENSUMAG00000005029	CPSF2	99	89.831	Ursus_maritimus
ENSSMAG00000002001	cpsf2	99	84.010	ENSVPAG00000003503	CPSF2	100	84.010	Vicugna_pacos
ENSSMAG00000002001	cpsf2	100	84.157	ENSVVUG00000024642	CPSF2	100	84.157	Vulpes_vulpes
ENSSMAG00000002001	cpsf2	100	83.797	ENSXETG00000010289	cpsf2	100	83.397	Xenopus_tropicalis
ENSSMAG00000002001	cpsf2	100	93.782	ENSXCOG00000001764	cpsf2	100	92.893	Xiphophorus_couchianus
ENSSMAG00000002001	cpsf2	100	94.416	ENSXMAG00000017048	cpsf2	100	93.528	Xiphophorus_maculatus