EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000002031 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 9098 bases
Position: chr18:5464242-5473339
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000003255	zf-C2H2	PF00096.26	8.7e-34	1	6
ENSSMAP00000003255	zf-C2H2	PF00096.26	8.7e-34	2	6
ENSSMAP00000003255	zf-C2H2	PF00096.26	8.7e-34	3	6
ENSSMAP00000003255	zf-C2H2	PF00096.26	8.7e-34	4	6
ENSSMAP00000003255	zf-C2H2	PF00096.26	8.7e-34	5	6
ENSSMAP00000003255	zf-C2H2	PF00096.26	8.7e-34	6	6
ENSSMAP00000003238	zf-C2H2	PF00096.26	4.1e-33	1	6
ENSSMAP00000003238	zf-C2H2	PF00096.26	4.1e-33	2	6
ENSSMAP00000003238	zf-C2H2	PF00096.26	4.1e-33	3	6
ENSSMAP00000003238	zf-C2H2	PF00096.26	4.1e-33	4	6
ENSSMAP00000003238	zf-C2H2	PF00096.26	4.1e-33	5	6
ENSSMAP00000003238	zf-C2H2	PF00096.26	4.1e-33	6	6
ENSSMAP00000003255	zf-met	PF12874.7	3.6e-11	1	1
ENSSMAP00000003238	zf-met	PF12874.7	1.3e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000003312	-	4983	-	ENSSMAP00000003255	820 (aa)	-	-
ENSSMAT00000003295	-	4420	-	ENSSMAP00000003238	904 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000002031's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000002031's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000002031	-	98	37.745	ENSSMAG00000013291	-	99	46.032
ENSSMAG00000002031	-	64	38.095	ENSSMAG00000000183	-	69	38.095
ENSSMAG00000002031	-	60	33.962	ENSSMAG00000014864	-	87	49.315
ENSSMAG00000002031	-	57	42.466	ENSSMAG00000013663	-	93	45.378
ENSSMAG00000002031	-	58	35.780	ENSSMAG00000012378	znf646	72	35.780
ENSSMAG00000002031	-	58	42.775	ENSSMAG00000021251	-	89	49.425
ENSSMAG00000002031	-	50	41.259	ENSSMAG00000009115	-	86	47.761
ENSSMAG00000002031	-	57	41.618	ENSSMAG00000000056	-	99	34.375
ENSSMAG00000002031	-	57	43.704	ENSSMAG00000006197	-	96	38.202
ENSSMAG00000002031	-	60	41.912	ENSSMAG00000014844	-	74	41.912
ENSSMAG00000002031	-	57	33.058	ENSSMAG00000014597	-	60	30.793
ENSSMAG00000002031	-	58	33.333	ENSSMAG00000019980	-	69	33.333
ENSSMAG00000002031	-	66	36.667	ENSSMAG00000007396	-	86	36.667
ENSSMAG00000002031	-	58	41.429	ENSSMAG00000021271	-	93	41.429
ENSSMAG00000002031	-	57	33.094	ENSSMAG00000002391	ZNF319	86	36.709
ENSSMAG00000002031	-	59	33.427	ENSSMAG00000018844	prdm5	73	33.426
ENSSMAG00000002031	-	57	39.149	ENSSMAG00000017045	-	52	41.063
ENSSMAG00000002031	-	54	40.541	ENSSMAG00000003594	-	81	38.281
ENSSMAG00000002031	-	57	38.686	ENSSMAG00000009020	znf526	51	38.686
ENSSMAG00000002031	-	57	30.717	ENSSMAG00000015282	-	90	30.717
ENSSMAG00000002031	-	97	35.671	ENSSMAG00000005081	-	99	35.529
ENSSMAG00000002031	-	57	33.645	ENSSMAG00000004252	-	84	33.645
ENSSMAG00000002031	-	63	35.841	ENSSMAG00000013773	zbtb47b	67	35.841
ENSSMAG00000002031	-	60	39.545	ENSSMAG00000019949	-	60	50.000
ENSSMAG00000002031	-	58	36.859	ENSSMAG00000009685	-	84	45.098
ENSSMAG00000002031	-	57	45.783	ENSSMAG00000015347	-	81	45.783

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000002031	-	99	35.430	ENSAPOG00000003028	-	95	35.430	Acanthochromis_polyacanthus
ENSSMAG00000002031	-	97	34.894	ENSATEG00000023044	-	95	34.894	Anabas_testudineus
ENSSMAG00000002031	-	97	35.532	ENSACLG00000016841	-	95	35.532	Astatotilapia_calliptera
ENSSMAG00000002031	-	99	34.681	ENSCSEG00000004721	-	99	34.681	Cynoglossus_semilaevis
ENSSMAG00000002031	-	96	35.745	ENSFHEG00000003583	-	98	35.745	Fundulus_heteroclitus
ENSSMAG00000002031	-	100	79.431	ENSKMAG00000003402	-	100	79.431	Kryptolebias_marmoratus
ENSSMAG00000002031	-	98	35.569	ENSMAMG00000015670	-	95	35.569	Mastacembelus_armatus
ENSSMAG00000002031	-	97	35.532	ENSMZEG00005001313	-	95	35.532	Maylandia_zebra
ENSSMAG00000002031	-	57	77.728	ENSMMOG00000020682	-	89	78.251	Mola_mola
ENSSMAG00000002031	-	96	33.099	ENSMALG00000011860	-	98	33.099	Monopterus_albus
ENSSMAG00000002031	-	90	30.599	ENSNBRG00000010987	-	100	30.599	Neolamprologus_brichardi
ENSSMAG00000002031	-	59	33.333	ENSONIG00000017799	-	95	33.333	Oreochromis_niloticus
ENSSMAG00000002031	-	97	35.244	ENSORLG00000027418	-	95	35.244	Oryzias_latipes
ENSSMAG00000002031	-	97	35.821	ENSORLG00020008744	-	97	34.160	Oryzias_latipes_hni
ENSSMAG00000002031	-	97	34.820	ENSORLG00015007973	-	95	34.820	Oryzias_latipes_hsok
ENSSMAG00000002031	-	97	34.274	ENSOMEG00000003451	-	95	32.957	Oryzias_melastigma
ENSSMAG00000002031	-	95	35.532	ENSPREG00000007135	-	97	35.532	Poecilia_reticulata
ENSSMAG00000002031	-	98	36.170	ENSSDUG00000016734	-	95	36.170	Seriola_dumerili
ENSSMAG00000002031	-	98	35.542	ENSSLDG00000004485	-	95	35.542	Seriola_lalandi_dorsalis
ENSSMAG00000002031	-	98	35.516	ENSSPAG00000003796	-	95	35.516	Stegastes_partitus
ENSSMAG00000002031	-	98	35.745	ENSTRUG00000025881	-	97	35.745	Takifugu_rubripes
ENSSMAG00000002031	-	98	38.482	ENSXMAG00000024762	-	98	32.353	Xiphophorus_maculatus