EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000002055 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 11767 bases
Position: chr4:6204636-6216402
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000003371	RRM_5	PF13893.6	9.9e-11	1	2
ENSSMAP00000003371	RRM_5	PF13893.6	9.9e-11	2	2
ENSSMAP00000003325	RRM_5	PF13893.6	1.1e-10	1	2
ENSSMAP00000003325	RRM_5	PF13893.6	1.1e-10	2	2
ENSSMAP00000003356	RRM_5	PF13893.6	1.1e-10	1	2
ENSSMAP00000003356	RRM_5	PF13893.6	1.1e-10	2	2
ENSSMAP00000003378	RRM_5	PF13893.6	2.7e-10	1	2
ENSSMAP00000003378	RRM_5	PF13893.6	2.7e-10	2	2
ENSSMAP00000003371	RRM_1	PF00076.22	9.4e-32	1	2
ENSSMAP00000003371	RRM_1	PF00076.22	9.4e-32	2	2
ENSSMAP00000003325	RRM_1	PF00076.22	1.1e-31	1	2
ENSSMAP00000003325	RRM_1	PF00076.22	1.1e-31	2	2
ENSSMAP00000003356	RRM_1	PF00076.22	1.1e-31	1	2
ENSSMAP00000003356	RRM_1	PF00076.22	1.1e-31	2	2
ENSSMAP00000003378	RRM_1	PF00076.22	1.1e-31	1	2
ENSSMAP00000003378	RRM_1	PF00076.22	1.1e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000003428	-	3174	-	ENSSMAP00000003371	517 (aa)	-	A0A2U9B7I1
ENSSMAT00000003435	-	1641	-	ENSSMAP00000003378	546 (aa)	-	-
ENSSMAT00000003382	-	5994	-	ENSSMAP00000003325	544 (aa)	-	-
ENSSMAT00000003413	-	5628	-	ENSSMAP00000003356	544 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000002055's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000002055's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000002055	-	69	63.273	ENSSMAG00000004522	rbm14b	79	63.273

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000002055	-	71	62.182	ENSAPOG00000021712	rbm14b	68	62.182	Acanthochromis_polyacanthus
ENSSMAG00000002055	-	99	91.803	ENSAPOG00000003380	-	100	90.893	Acanthochromis_polyacanthus
ENSSMAG00000002055	-	71	61.733	ENSACIG00000000381	rbm14b	66	60.777	Amphilophus_citrinellus
ENSSMAG00000002055	-	100	87.342	ENSACIG00000021173	-	100	87.342	Amphilophus_citrinellus
ENSSMAG00000002055	-	71	62.182	ENSAOCG00000008941	rbm14b	83	53.846	Amphiprion_ocellaris
ENSSMAG00000002055	-	99	91.360	ENSAOCG00000001659	-	100	90.944	Amphiprion_ocellaris
ENSSMAG00000002055	-	100	90.563	ENSAPEG00000016988	-	100	91.026	Amphiprion_percula
ENSSMAG00000002055	-	71	62.182	ENSAPEG00000003161	rbm14b	83	54.750	Amphiprion_percula
ENSSMAG00000002055	-	71	61.011	ENSATEG00000003034	rbm14b	79	56.296	Anabas_testudineus
ENSSMAG00000002055	-	100	87.739	ENSATEG00000009700	-	97	87.739	Anabas_testudineus
ENSSMAG00000002055	-	100	89.071	ENSACLG00000009112	-	97	87.978	Astatotilapia_calliptera
ENSSMAG00000002055	-	71	61.733	ENSACLG00000014355	rbm14b	64	61.733	Astatotilapia_calliptera
ENSSMAG00000002055	-	74	60.553	ENSAMXG00000007233	rbm14a	83	58.272	Astyanax_mexicanus
ENSSMAG00000002055	-	66	61.039	ENSAMXG00000031225	rbm14b	81	47.738	Astyanax_mexicanus
ENSSMAG00000002055	-	69	53.494	ENSCSEG00000000357	rbm14b	81	51.802	Cynoglossus_semilaevis
ENSSMAG00000002055	-	100	85.610	ENSCSEG00000019690	-	100	85.428	Cynoglossus_semilaevis
ENSSMAG00000002055	-	74	48.529	ENSCVAG00000013776	rbm14b	84	48.140	Cyprinodon_variegatus
ENSSMAG00000002055	-	100	83.755	ENSCVAG00000014858	-	100	84.116	Cyprinodon_variegatus
ENSSMAG00000002055	-	74	60.102	ENSDARG00000012723	rbm14a	81	59.698	Danio_rerio
ENSSMAG00000002055	-	69	60.000	ENSDARG00000103834	rbm14b	64	60.806	Danio_rerio
ENSSMAG00000002055	-	88	56.151	ENSELUG00000023633	rbm14a	82	54.897	Esox_lucius
ENSSMAG00000002055	-	70	62.132	ENSELUG00000004690	rbm14b	71	61.733	Esox_lucius
ENSSMAG00000002055	-	100	81.887	ENSFHEG00000020913	-	100	83.208	Fundulus_heteroclitus
ENSSMAG00000002055	-	75	48.428	ENSFHEG00000021265	rbm14b	84	48.554	Fundulus_heteroclitus
ENSSMAG00000002055	-	73	81.152	ENSGMOG00000010840	-	79	79.634	Gadus_morhua
ENSSMAG00000002055	-	72	61.429	ENSGAFG00000001924	rbm14b	66	61.733	Gambusia_affinis
ENSSMAG00000002055	-	100	83.588	ENSGAFG00000004455	-	100	83.779	Gambusia_affinis
ENSSMAG00000002055	-	89	89.154	ENSGACG00000020440	-	95	89.588	Gasterosteus_aculeatus
ENSSMAG00000002055	-	100	89.071	ENSHBUG00000003665	-	97	87.978	Haplochromis_burtoni
ENSSMAG00000002055	-	71	61.733	ENSHBUG00000016754	rbm14b	64	61.733	Haplochromis_burtoni
ENSSMAG00000002055	-	80	53.774	ENSHCOG00000012571	rbm14b	99	65.409	Hippocampus_comes
ENSSMAG00000002055	-	100	74.954	ENSHCOG00000004071	-	100	76.636	Hippocampus_comes
ENSSMAG00000002055	-	74	55.556	ENSIPUG00000021256	rbm14a	84	55.107	Ictalurus_punctatus
ENSSMAG00000002055	-	69	61.039	ENSIPUG00000009089	rbm14b	67	60.870	Ictalurus_punctatus
ENSSMAG00000002055	-	99	84.363	ENSKMAG00000008514	-	99	84.170	Kryptolebias_marmoratus
ENSSMAG00000002055	-	52	61.818	ENSKMAG00000020444	rbm14b	65	61.818	Kryptolebias_marmoratus
ENSSMAG00000002055	-	52	61.511	ENSLBEG00000027934	rbm14b	70	61.511	Labrus_bergylta
ENSSMAG00000002055	-	100	86.837	ENSLBEG00000001217	-	100	86.654	Labrus_bergylta
ENSSMAG00000002055	-	100	89.293	ENSMAMG00000021313	-	100	89.293	Mastacembelus_armatus
ENSSMAG00000002055	-	70	61.624	ENSMAMG00000014394	rbm14b	62	60.650	Mastacembelus_armatus
ENSSMAG00000002055	-	100	89.071	ENSMZEG00005001201	-	100	87.978	Maylandia_zebra
ENSSMAG00000002055	-	71	61.733	ENSMZEG00005020834	rbm14b	65	61.733	Maylandia_zebra
ENSSMAG00000002055	-	71	56.475	ENSMMOG00000012912	rbm14b	69	56.475	Mola_mola
ENSSMAG00000002055	-	99	85.316	ENSMMOG00000014501	-	99	85.688	Mola_mola
ENSSMAG00000002055	-	69	56.915	ENSMALG00000015445	rbm14b	81	56.499	Monopterus_albus
ENSSMAG00000002055	-	99	88.848	ENSNBRG00000004960	-	99	87.751	Neolamprologus_brichardi
ENSSMAG00000002055	-	71	61.733	ENSNBRG00000003378	rbm14b	65	61.733	Neolamprologus_brichardi
ENSSMAG00000002055	-	89	86.938	ENSONIG00000008557	-	95	85.653	Oreochromis_niloticus
ENSSMAG00000002055	-	69	58.466	ENSONIG00000013035	rbm14b	83	56.127	Oreochromis_niloticus
ENSSMAG00000002055	-	74	46.347	ENSORLG00000008051	rbm14b	82	44.789	Oryzias_latipes
ENSSMAG00000002055	-	100	84.909	ENSORLG00000001900	-	100	85.468	Oryzias_latipes
ENSSMAG00000002055	-	100	84.909	ENSORLG00020019144	-	100	85.468	Oryzias_latipes_hni
ENSSMAG00000002055	-	74	45.816	ENSORLG00020005551	rbm14b	82	44.444	Oryzias_latipes_hni
ENSSMAG00000002055	-	74	46.138	ENSORLG00015022683	rbm14b	82	44.568	Oryzias_latipes_hsok
ENSSMAG00000002055	-	100	84.909	ENSORLG00015000082	-	100	85.636	Oryzias_latipes_hsok
ENSSMAG00000002055	-	80	87.651	ENSOMEG00000006508	-	96	90.000	Oryzias_melastigma
ENSSMAG00000002055	-	71	61.818	ENSOMEG00000000910	rbm14b	79	54.364	Oryzias_melastigma
ENSSMAG00000002055	-	52	60.289	ENSPKIG00000009078	rbm14b	94	45.421	Paramormyrops_kingsleyae
ENSSMAG00000002055	-	81	78.998	ENSPMGG00000018869	-	93	87.162	Periophthalmus_magnuspinnatus
ENSSMAG00000002055	-	72	62.182	ENSPMGG00000013064	rbm14b	67	62.182	Periophthalmus_magnuspinnatus
ENSSMAG00000002055	-	53	61.786	ENSPFOG00000003614	rbm14b	84	47.119	Poecilia_formosa
ENSSMAG00000002055	-	100	84.190	ENSPFOG00000004843	-	100	84.762	Poecilia_formosa
ENSSMAG00000002055	-	100	84.190	ENSPLAG00000017359	-	100	84.762	Poecilia_latipinna
ENSSMAG00000002055	-	100	84.601	ENSPMEG00000004894	-	100	85.145	Poecilia_mexicana
ENSSMAG00000002055	-	100	84.000	ENSPREG00000007274	-	100	84.381	Poecilia_reticulata
ENSSMAG00000002055	-	100	89.071	ENSPNYG00000015906	-	100	87.978	Pundamilia_nyererei
ENSSMAG00000002055	-	71	61.733	ENSPNYG00000023605	rbm14b	65	61.733	Pundamilia_nyererei
ENSSMAG00000002055	-	85	56.962	ENSPNAG00000012473	rbm14a	96	56.933	Pygocentrus_nattereri
ENSSMAG00000002055	-	68	61.039	ENSPNAG00000001977	rbm14b	63	60.870	Pygocentrus_nattereri
ENSSMAG00000002055	-	73	49.890	ENSSFOG00015023796	rbm14b	85	47.629	Scleropages_formosus
ENSSMAG00000002055	-	100	91.985	ENSSDUG00000020756	-	100	92.896	Seriola_dumerili
ENSSMAG00000002055	-	71	61.733	ENSSDUG00000007975	rbm14b	76	61.733	Seriola_dumerili
ENSSMAG00000002055	-	71	61.733	ENSSLDG00000006472	rbm14b	76	61.733	Seriola_lalandi_dorsalis
ENSSMAG00000002055	-	100	91.486	ENSSLDG00000006311	-	100	92.391	Seriola_lalandi_dorsalis
ENSSMAG00000002055	-	71	61.733	ENSSPAG00000004231	rbm14b	65	60.777	Stegastes_partitus
ENSSMAG00000002055	-	99	91.715	ENSSPAG00000010825	-	99	91.392	Stegastes_partitus
ENSSMAG00000002055	-	71	61.957	ENSTRUG00000005716	rbm14b	65	61.957	Takifugu_rubripes
ENSSMAG00000002055	-	100	78.695	ENSTRUG00000009504	-	94	77.905	Takifugu_rubripes
ENSSMAG00000002055	-	100	66.728	ENSTNIG00000000058	-	100	76.559	Tetraodon_nigroviridis
ENSSMAG00000002055	-	69	54.545	ENSTNIG00000006844	rbm14b	80	52.840	Tetraodon_nigroviridis
ENSSMAG00000002055	-	99	81.818	ENSXCOG00000006825	-	99	82.020	Xiphophorus_couchianus
ENSSMAG00000002055	-	71	61.818	ENSXMAG00000008390	rbm14b	66	61.818	Xiphophorus_maculatus
ENSSMAG00000002055	-	100	84.239	ENSXMAG00000000338	-	100	84.601	Xiphophorus_maculatus