EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000002165 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 5346 bases
Position: chr18:14974261-14979606
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000003455	MMR_HSR1	PF01926.23	1.3e-05	1	1
ENSSMAP00000003463	MMR_HSR1	PF01926.23	1.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000003521	-	3365	-	ENSSMAP00000003463	225 (aa)	-	-
ENSSMAT00000003514	-	2764	-	ENSSMAP00000003455	198 (aa)	-	A0A2U9CTC6

Gene Model

Click here to download ENSSMAG00000002165's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000002165's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000002165	-	92	31.694	ENSSMAG00000016416	arl1	93	31.694
ENSSMAG00000002165	-	87	30.114	ENSSMAG00000005803	arl3	88	30.114
ENSSMAG00000002165	-	94	31.053	ENSSMAG00000021333	ARL6	96	31.053
ENSSMAG00000002165	-	95	31.088	ENSSMAG00000003002	arl3l2	89	31.088
ENSSMAG00000002165	-	86	33.708	ENSSMAG00000014218	-	87	33.333
ENSSMAG00000002165	-	56	38.261	ENSSMAG00000015059	arl4aa	58	38.261
ENSSMAG00000002165	-	90	30.556	ENSSMAG00000011361	arf5	93	31.325
ENSSMAG00000002165	-	66	35.766	ENSSMAG00000013072	-	68	35.766
ENSSMAG00000002165	-	58	84.348	ENSSMAG00000020758	sar1ab	83	84.348
ENSSMAG00000002165	-	92	34.426	ENSSMAG00000017643	arl2	93	34.426
ENSSMAG00000002165	-	73	33.103	ENSSMAG00000016740	arl8ba	73	33.103
ENSSMAG00000002165	-	91	33.149	ENSSMAG00000006125	-	94	33.149
ENSSMAG00000002165	-	86	30.682	ENSSMAG00000008394	arl4d	82	30.682
ENSSMAG00000002165	-	100	82.323	ENSSMAG00000007106	sar1b	89	78.182
ENSSMAG00000002165	-	91	30.939	ENSSMAG00000010770	arf2b	93	30.939
ENSSMAG00000002165	-	66	36.090	ENSSMAG00000006815	ARF6	88	36.090
ENSSMAG00000002165	-	63	37.097	ENSSMAG00000002487	-	74	36.800
ENSSMAG00000002165	-	91	31.667	ENSSMAG00000018796	-	94	31.667
ENSSMAG00000002165	-	72	33.108	ENSSMAG00000016399	arl4cb	74	33.108
ENSSMAG00000002165	-	73	31.724	ENSSMAG00000015087	arl8a	73	31.724
ENSSMAG00000002165	-	87	31.214	ENSSMAG00000004541	-	89	31.214
ENSSMAG00000002165	-	73	33.103	ENSSMAG00000015130	arl8bb	73	33.103
ENSSMAG00000002165	-	64	36.364	ENSSMAG00000017183	-	66	36.364
ENSSMAG00000002165	-	85	34.503	ENSSMAG00000012843	-	77	34.503

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000002165	-	100	95.455	ENSAPOG00000017891	-	100	95.455	Acanthochromis_polyacanthus
ENSSMAG00000002165	-	100	85.354	ENSAPOG00000007186	sar1b	100	85.354	Acanthochromis_polyacanthus
ENSSMAG00000002165	-	100	86.364	ENSACIG00000013634	sar1b	100	86.364	Amphilophus_citrinellus
ENSSMAG00000002165	-	100	93.939	ENSACIG00000024513	-	100	93.939	Amphilophus_citrinellus
ENSSMAG00000002165	-	100	95.455	ENSAOCG00000002627	-	100	95.455	Amphiprion_ocellaris
ENSSMAG00000002165	-	100	84.848	ENSAOCG00000005888	sar1b	100	84.848	Amphiprion_ocellaris
ENSSMAG00000002165	-	100	95.455	ENSAPEG00000019680	-	100	95.455	Amphiprion_percula
ENSSMAG00000002165	-	100	84.848	ENSAPEG00000022771	sar1b	100	84.848	Amphiprion_percula
ENSSMAG00000002165	-	100	84.343	ENSATEG00000012904	sar1b	100	84.343	Anabas_testudineus
ENSSMAG00000002165	-	100	92.929	ENSATEG00000023368	-	100	92.929	Anabas_testudineus
ENSSMAG00000002165	-	100	84.343	ENSACAG00000001470	-	100	84.343	Anolis_carolinensis
ENSSMAG00000002165	-	100	94.444	ENSACLG00000005011	-	100	94.444	Astatotilapia_calliptera
ENSSMAG00000002165	-	100	85.859	ENSACLG00000014649	sar1b	100	85.859	Astatotilapia_calliptera
ENSSMAG00000002165	-	59	89.744	ENSAMXG00000018108	sar1b	84	89.744	Astyanax_mexicanus
ENSSMAG00000002165	-	100	88.889	ENSAMXG00000034192	-	96	86.190	Astyanax_mexicanus
ENSSMAG00000002165	-	100	92.929	ENSCSEG00000016976	-	100	92.929	Cynoglossus_semilaevis
ENSSMAG00000002165	-	100	80.303	ENSCSEG00000015238	sar1b	98	79.602	Cynoglossus_semilaevis
ENSSMAG00000002165	-	100	86.869	ENSCVAG00000022959	sar1b	100	86.869	Cyprinodon_variegatus
ENSSMAG00000002165	-	100	86.364	ENSDARG00000103403	sar1b	100	86.364	Danio_rerio
ENSSMAG00000002165	-	99	69.898	FBgn0038947	Sar1	99	69.898	Drosophila_melanogaster
ENSSMAG00000002165	-	98	80.412	ENSEBUG00000011723	sar1b	98	80.412	Eptatretus_burgeri
ENSSMAG00000002165	-	100	87.374	ENSELUG00000020912	sar1b	100	87.374	Esox_lucius
ENSSMAG00000002165	-	100	85.859	ENSFHEG00000019865	sar1b	100	85.859	Fundulus_heteroclitus
ENSSMAG00000002165	-	100	85.859	ENSGMOG00000008023	sar1b	100	85.859	Gadus_morhua
ENSSMAG00000002165	-	100	84.343	ENSGAFG00000007081	sar1b	100	84.343	Gambusia_affinis
ENSSMAG00000002165	-	100	83.838	ENSGACG00000001474	sar1b	100	83.838	Gasterosteus_aculeatus
ENSSMAG00000002165	-	100	85.859	ENSHBUG00000000915	sar1b	100	85.859	Haplochromis_burtoni
ENSSMAG00000002165	-	100	94.444	ENSHBUG00000018397	-	100	94.444	Haplochromis_burtoni
ENSSMAG00000002165	-	100	84.343	ENSHCOG00000010953	sar1b	100	84.343	Hippocampus_comes
ENSSMAG00000002165	-	100	84.848	ENSIPUG00000020925	sar1b	100	84.848	Ictalurus_punctatus
ENSSMAG00000002165	-	100	86.869	ENSIPUG00000010046	sar1b	100	86.869	Ictalurus_punctatus
ENSSMAG00000002165	-	100	90.404	ENSKMAG00000014875	-	100	90.404	Kryptolebias_marmoratus
ENSSMAG00000002165	-	100	84.848	ENSKMAG00000019693	sar1b	100	84.848	Kryptolebias_marmoratus
ENSSMAG00000002165	-	100	82.323	ENSLBEG00000027550	sar1b	100	82.323	Labrus_bergylta
ENSSMAG00000002165	-	100	94.949	ENSLBEG00000016945	-	100	94.949	Labrus_bergylta
ENSSMAG00000002165	-	100	80.303	ENSLACG00000010795	sar1b	100	80.303	Latimeria_chalumnae
ENSSMAG00000002165	-	100	66.834	ENSLACG00000017029	-	100	66.834	Latimeria_chalumnae
ENSSMAG00000002165	-	100	86.364	ENSLOCG00000010197	sar1b	100	86.364	Lepisosteus_oculatus
ENSSMAG00000002165	-	100	86.869	ENSLOCG00000005214	-	100	86.869	Lepisosteus_oculatus
ENSSMAG00000002165	-	100	83.333	ENSMAMG00000021732	sar1b	100	83.333	Mastacembelus_armatus
ENSSMAG00000002165	-	100	85.859	ENSMZEG00005008942	sar1b	100	85.859	Maylandia_zebra
ENSSMAG00000002165	-	100	94.444	ENSMZEG00005001012	-	100	94.444	Maylandia_zebra
ENSSMAG00000002165	-	90	85.475	ENSMGAG00000005387	-	91	85.475	Meleagris_gallopavo
ENSSMAG00000002165	-	100	93.939	ENSMMOG00000013803	-	100	93.939	Mola_mola
ENSSMAG00000002165	-	100	83.838	ENSMALG00000016635	sar1b	97	82.967	Monopterus_albus
ENSSMAG00000002165	-	100	94.949	ENSNBRG00000014004	-	100	94.949	Neolamprologus_brichardi
ENSSMAG00000002165	-	100	85.859	ENSNBRG00000008013	sar1b	100	85.859	Neolamprologus_brichardi
ENSSMAG00000002165	-	100	85.859	ENSONIG00000017278	sar1b	100	85.859	Oreochromis_niloticus
ENSSMAG00000002165	-	100	85.354	ENSORLG00000000932	sar1b	100	85.354	Oryzias_latipes
ENSSMAG00000002165	-	100	85.354	ENSORLG00020021985	sar1b	100	85.354	Oryzias_latipes_hni
ENSSMAG00000002165	-	100	85.354	ENSORLG00015007044	sar1b	100	85.354	Oryzias_latipes_hsok
ENSSMAG00000002165	-	100	84.343	ENSOMEG00000001052	sar1b	100	84.343	Oryzias_melastigma
ENSSMAG00000002165	-	100	84.343	ENSPKIG00000010688	sar1b	100	84.343	Paramormyrops_kingsleyae
ENSSMAG00000002165	-	100	86.869	ENSPKIG00000017353	-	100	86.869	Paramormyrops_kingsleyae
ENSSMAG00000002165	-	59	87.931	ENSPMGG00000001234	sar1b	91	87.931	Periophthalmus_magnuspinnatus
ENSSMAG00000002165	-	100	79.602	ENSPMAG00000003593	sar1b	100	79.602	Petromyzon_marinus
ENSSMAG00000002165	-	100	84.343	ENSPFOG00000005666	sar1b	100	84.343	Poecilia_formosa
ENSSMAG00000002165	-	100	84.848	ENSPLAG00000012223	sar1b	100	84.848	Poecilia_latipinna
ENSSMAG00000002165	-	59	92.308	ENSPLAG00000001016	-	75	92.308	Poecilia_latipinna
ENSSMAG00000002165	-	100	84.343	ENSPMEG00000016831	sar1b	100	84.343	Poecilia_mexicana
ENSSMAG00000002165	-	60	91.525	ENSPREG00000002020	-	87	91.525	Poecilia_reticulata
ENSSMAG00000002165	-	100	84.343	ENSPREG00000005312	sar1b	99	78.802	Poecilia_reticulata
ENSSMAG00000002165	-	100	93.939	ENSPNYG00000021357	-	100	93.939	Pundamilia_nyererei
ENSSMAG00000002165	-	100	85.859	ENSPNYG00000012440	sar1b	100	85.859	Pundamilia_nyererei
ENSSMAG00000002165	-	100	88.889	ENSPNAG00000001123	-	100	88.889	Pygocentrus_nattereri
ENSSMAG00000002165	-	100	86.869	ENSPNAG00000014683	sar1b	100	86.869	Pygocentrus_nattereri
ENSSMAG00000002165	-	100	86.364	ENSSFOG00015018128	-	100	86.364	Scleropages_formosus
ENSSMAG00000002165	-	100	86.869	ENSSFOG00015020051	sar1b	100	86.869	Scleropages_formosus
ENSSMAG00000002165	-	100	96.465	ENSSDUG00000019629	-	100	96.465	Seriola_dumerili
ENSSMAG00000002165	-	100	85.354	ENSSDUG00000020926	sar1b	100	85.354	Seriola_dumerili
ENSSMAG00000002165	-	100	96.465	ENSSLDG00000024197	-	100	96.465	Seriola_lalandi_dorsalis
ENSSMAG00000002165	-	100	85.354	ENSSLDG00000017052	sar1b	100	85.354	Seriola_lalandi_dorsalis
ENSSMAG00000002165	-	100	83.838	ENSSPUG00000010247	-	100	83.838	Sphenodon_punctatus
ENSSMAG00000002165	-	100	94.949	ENSSPAG00000015626	-	100	94.949	Stegastes_partitus
ENSSMAG00000002165	-	100	85.354	ENSSPAG00000017634	sar1b	100	85.354	Stegastes_partitus
ENSSMAG00000002165	-	100	82.323	ENSTRUG00000023908	sar1b	100	82.323	Takifugu_rubripes
ENSSMAG00000002165	-	100	83.838	ENSTNIG00000016097	sar1b	100	83.838	Tetraodon_nigroviridis
ENSSMAG00000002165	-	90	84.270	ENSXCOG00000004160	sar1b	87	84.270	Xiphophorus_couchianus
ENSSMAG00000002165	-	59	90.598	ENSXCOG00000006154	-	79	90.598	Xiphophorus_couchianus
ENSSMAG00000002165	-	100	84.343	ENSXMAG00000008294	sar1b	100	84.343	Xiphophorus_maculatus