EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000002197 (Gene tree)
Gene ID: -
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 3
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 10362 bases
Position: chr5:15414090-15424451
Accession: ZDB-GENE-040426-1997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000003606	Suf	PF05843.14	4.2e-83	1	1
ENSSMAP00000003560	Suf	PF05843.14	2.6e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000003623	-	3104	-	ENSSMAP00000003560	653 (aa)	-	-
ENSSMAT00000003669	-	2814	-	ENSSMAP00000003606	716 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000002197's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000002197's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000002197	cstf3	100	90.251	ENSG00000176102	CSTF3	100	90.251	Homo_sapiens
ENSSMAG00000002197	cstf3	100	98.184	ENSAPOG00000014054	cstf3	100	98.184	Acanthochromis_polyacanthus
ENSSMAG00000002197	cstf3	99	90.819	ENSAMEG00000007187	CSTF3	98	90.819	Ailuropoda_melanoleuca
ENSSMAG00000002197	cstf3	87	92.456	ENSACIG00000005539	cstf3	100	92.456	Amphilophus_citrinellus
ENSSMAG00000002197	cstf3	100	98.184	ENSAOCG00000010930	cstf3	100	98.184	Amphiprion_ocellaris
ENSSMAG00000002197	cstf3	100	98.184	ENSAPEG00000007903	cstf3	100	98.184	Amphiprion_percula
ENSSMAG00000002197	cstf3	100	97.765	ENSATEG00000000190	cstf3	100	97.765	Anabas_testudineus
ENSSMAG00000002197	cstf3	99	91.102	ENSAPLG00000007217	CSTF3	100	91.102	Anas_platyrhynchos
ENSSMAG00000002197	cstf3	100	90.947	ENSACAG00000002823	CSTF3	100	90.947	Anolis_carolinensis
ENSSMAG00000002197	cstf3	100	90.251	ENSANAG00000020699	CSTF3	100	90.400	Aotus_nancymaae
ENSSMAG00000002197	cstf3	100	97.067	ENSACLG00000007820	cstf3	100	97.067	Astatotilapia_calliptera
ENSSMAG00000002197	cstf3	100	92.340	ENSAMXG00000014198	cstf3	100	92.618	Astyanax_mexicanus
ENSSMAG00000002197	cstf3	100	90.251	ENSBTAG00000008617	CSTF3	100	90.801	Bos_taurus
ENSSMAG00000002197	cstf3	94	51.343	WBGene00006307	suf-1	99	47.439	Caenorhabditis_elegans
ENSSMAG00000002197	cstf3	100	90.251	ENSCJAG00000005533	CSTF3	100	90.400	Callithrix_jacchus
ENSSMAG00000002197	cstf3	100	90.251	ENSCAFG00000007264	CSTF3	100	90.251	Canis_familiaris
ENSSMAG00000002197	cstf3	99	90.960	ENSCAFG00020002715	CSTF3	98	90.960	Canis_lupus_dingo
ENSSMAG00000002197	cstf3	98	89.474	ENSCHIG00000016418	CSTF3	100	90.400	Capra_hircus
ENSSMAG00000002197	cstf3	99	91.243	ENSTSYG00000000451	CSTF3	99	95.991	Carlito_syrichta
ENSSMAG00000002197	cstf3	83	88.152	ENSCAPG00000010958	CSTF3	98	88.152	Cavia_aperea
ENSSMAG00000002197	cstf3	100	90.390	ENSCPOG00000005545	CSTF3	100	90.390	Cavia_porcellus
ENSSMAG00000002197	cstf3	100	90.251	ENSCCAG00000024790	CSTF3	96	95.991	Cebus_capucinus
ENSSMAG00000002197	cstf3	100	90.251	ENSCATG00000007080	CSTF3	100	90.400	Cercocebus_atys
ENSSMAG00000002197	cstf3	100	90.251	ENSCLAG00000016179	CSTF3	100	90.251	Chinchilla_lanigera
ENSSMAG00000002197	cstf3	78	96.992	ENSCHOG00000002497	CSTF3	79	96.992	Choloepus_hoffmanni
ENSSMAG00000002197	cstf3	100	90.529	ENSCPBG00000006753	CSTF3	100	90.529	Chrysemys_picta_bellii
ENSSMAG00000002197	cstf3	99	61.859	ENSCING00000006401	-	99	61.997	Ciona_intestinalis
ENSSMAG00000002197	cstf3	98	61.646	ENSCSAVG00000004851	-	100	61.646	Ciona_savignyi
ENSSMAG00000002197	cstf3	100	90.251	ENSCANG00000035468	CSTF3	100	90.400	Colobus_angolensis_palliatus
ENSSMAG00000002197	cstf3	100	90.111	ENSCGRG00001014773	Cstf3	100	90.111	Cricetulus_griseus_chok1gshd
ENSSMAG00000002197	cstf3	100	90.111	ENSCGRG00000004142	Cstf3	100	90.111	Cricetulus_griseus_crigri
ENSSMAG00000002197	cstf3	100	97.207	ENSCSEG00000014283	cstf3	100	97.207	Cynoglossus_semilaevis
ENSSMAG00000002197	cstf3	100	96.089	ENSCVAG00000019739	cstf3	100	96.089	Cyprinodon_variegatus
ENSSMAG00000002197	cstf3	100	93.863	ENSDARG00000018904	cstf3	100	93.863	Danio_rerio
ENSSMAG00000002197	cstf3	96	94.258	ENSDNOG00000007366	CSTF3	99	90.769	Dasypus_novemcinctus
ENSSMAG00000002197	cstf3	99	83.498	ENSDORG00000005898	Cstf3	99	83.498	Dipodomys_ordii
ENSSMAG00000002197	cstf3	96	60.539	FBgn0003559	su(f)	99	55.676	Drosophila_melanogaster
ENSSMAG00000002197	cstf3	89	85.202	ENSETEG00000017097	CSTF3	90	85.202	Echinops_telfairi
ENSSMAG00000002197	cstf3	93	74.300	ENSEBUG00000015459	cstf3	96	74.461	Eptatretus_burgeri
ENSSMAG00000002197	cstf3	94	94.608	ENSEASG00005019884	CSTF3	96	95.991	Equus_asinus_asinus
ENSSMAG00000002197	cstf3	94	94.608	ENSECAG00000023338	CSTF3	96	95.991	Equus_caballus
ENSSMAG00000002197	cstf3	100	85.515	ENSEEUG00000015167	CSTF3	100	85.515	Erinaceus_europaeus
ENSSMAG00000002197	cstf3	100	94.840	ENSELUG00000023393	cstf3	100	94.840	Esox_lucius
ENSSMAG00000002197	cstf3	100	90.390	ENSFCAG00000030711	CSTF3	100	90.390	Felis_catus
ENSSMAG00000002197	cstf3	95	94.516	ENSFALG00000010764	CSTF3	100	89.862	Ficedula_albicollis
ENSSMAG00000002197	cstf3	100	90.390	ENSFDAG00000012082	CSTF3	100	90.390	Fukomys_damarensis
ENSSMAG00000002197	cstf3	100	95.810	ENSFHEG00000020623	cstf3	100	95.810	Fundulus_heteroclitus
ENSSMAG00000002197	cstf3	100	95.125	ENSGMOG00000012275	cstf3	100	95.125	Gadus_morhua
ENSSMAG00000002197	cstf3	100	90.251	ENSGALG00000011685	CSTF3	100	90.251	Gallus_gallus
ENSSMAG00000002197	cstf3	100	95.950	ENSGAFG00000002181	cstf3	100	95.950	Gambusia_affinis
ENSSMAG00000002197	cstf3	100	97.486	ENSGACG00000015997	cstf3	100	97.486	Gasterosteus_aculeatus
ENSSMAG00000002197	cstf3	100	90.529	ENSGAGG00000006200	CSTF3	100	90.529	Gopherus_agassizii
ENSSMAG00000002197	cstf3	99	85.169	ENSGGOG00000026591	CSTF3	96	91.091	Gorilla_gorilla
ENSSMAG00000002197	cstf3	100	97.207	ENSHBUG00000016656	cstf3	100	97.207	Haplochromis_burtoni
ENSSMAG00000002197	cstf3	100	90.251	ENSHGLG00000017834	CSTF3	100	90.251	Heterocephalus_glaber_female
ENSSMAG00000002197	cstf3	100	90.251	ENSHGLG00100018042	CSTF3	100	90.251	Heterocephalus_glaber_male
ENSSMAG00000002197	cstf3	100	92.877	ENSHCOG00000015218	cstf3	100	92.877	Hippocampus_comes
ENSSMAG00000002197	cstf3	100	93.166	ENSIPUG00000013170	CSTF3	100	93.166	Ictalurus_punctatus
ENSSMAG00000002197	cstf3	100	90.251	ENSSTOG00000013306	CSTF3	100	90.251	Ictidomys_tridecemlineatus
ENSSMAG00000002197	cstf3	99	80.791	ENSJJAG00000018430	Cstf3	98	80.791	Jaculus_jaculus
ENSSMAG00000002197	cstf3	100	94.972	ENSKMAG00000010916	cstf3	100	94.972	Kryptolebias_marmoratus
ENSSMAG00000002197	cstf3	100	97.067	ENSLBEG00000002306	cstf3	100	97.067	Labrus_bergylta
ENSSMAG00000002197	cstf3	100	90.516	ENSLACG00000017296	CSTF3	100	90.516	Latimeria_chalumnae
ENSSMAG00000002197	cstf3	100	93.454	ENSLOCG00000004415	cstf3	100	93.454	Lepisosteus_oculatus
ENSSMAG00000002197	cstf3	100	90.251	ENSLAFG00000008712	CSTF3	100	90.251	Loxodonta_africana
ENSSMAG00000002197	cstf3	100	90.251	ENSMFAG00000029516	CSTF3	100	90.400	Macaca_fascicularis
ENSSMAG00000002197	cstf3	100	90.251	ENSMMUG00000002542	CSTF3	100	90.251	Macaca_mulatta
ENSSMAG00000002197	cstf3	100	90.251	ENSMNEG00000021807	CSTF3	100	90.400	Macaca_nemestrina
ENSSMAG00000002197	cstf3	100	90.251	ENSMLEG00000039594	CSTF3	97	93.764	Mandrillus_leucophaeus
ENSSMAG00000002197	cstf3	100	97.905	ENSMAMG00000020423	cstf3	100	97.905	Mastacembelus_armatus
ENSSMAG00000002197	cstf3	100	97.067	ENSMZEG00005012082	cstf3	100	97.067	Maylandia_zebra
ENSSMAG00000002197	cstf3	100	90.111	ENSMGAG00000001383	CSTF3	100	90.111	Meleagris_gallopavo
ENSSMAG00000002197	cstf3	100	89.972	ENSMAUG00000002487	Cstf3	100	89.972	Mesocricetus_auratus
ENSSMAG00000002197	cstf3	100	90.251	ENSMICG00000004784	CSTF3	100	90.400	Microcebus_murinus
ENSSMAG00000002197	cstf3	100	90.111	ENSMOCG00000017583	Cstf3	100	90.111	Microtus_ochrogaster
ENSSMAG00000002197	cstf3	99	97.458	ENSMMOG00000016026	cstf3	95	97.458	Mola_mola
ENSSMAG00000002197	cstf3	100	90.669	ENSMODG00000009745	-	100	90.669	Monodelphis_domestica
ENSSMAG00000002197	cstf3	99	80.197	ENSMODG00000025205	-	99	80.197	Monodelphis_domestica
ENSSMAG00000002197	cstf3	100	98.045	ENSMALG00000012050	cstf3	100	98.045	Monopterus_albus
ENSSMAG00000002197	cstf3	100	90.111	MGP_CAROLIEiJ_G0024026	Cstf3	100	90.111	Mus_caroli
ENSSMAG00000002197	cstf3	100	90.111	ENSMUSG00000027176	Cstf3	100	90.111	Mus_musculus
ENSSMAG00000002197	cstf3	100	90.111	MGP_PahariEiJ_G0025464	Cstf3	100	90.111	Mus_pahari
ENSSMAG00000002197	cstf3	100	90.111	MGP_SPRETEiJ_G0024939	Cstf3	100	90.111	Mus_spretus
ENSSMAG00000002197	cstf3	100	90.111	ENSMPUG00000011457	CSTF3	100	90.111	Mustela_putorius_furo
ENSSMAG00000002197	cstf3	99	90.960	ENSMLUG00000003073	-	99	90.960	Myotis_lucifugus
ENSSMAG00000002197	cstf3	100	87.744	ENSMLUG00000026022	-	100	87.744	Myotis_lucifugus
ENSSMAG00000002197	cstf3	100	90.111	ENSNGAG00000010677	Cstf3	100	90.111	Nannospalax_galili
ENSSMAG00000002197	cstf3	87	97.592	ENSNBRG00000007345	cstf3	100	97.592	Neolamprologus_brichardi
ENSSMAG00000002197	cstf3	100	90.251	ENSNLEG00000017901	CSTF3	97	93.541	Nomascus_leucogenys
ENSSMAG00000002197	cstf3	80	89.866	ENSMEUG00000005640	-	100	89.866	Notamacropus_eugenii
ENSSMAG00000002197	cstf3	67	86.842	ENSOPRG00000000199	-	67	86.842	Ochotona_princeps
ENSSMAG00000002197	cstf3	100	90.251	ENSODEG00000016737	-	100	90.251	Octodon_degus
ENSSMAG00000002197	cstf3	89	78.616	ENSODEG00000006311	-	97	78.616	Octodon_degus
ENSSMAG00000002197	cstf3	100	97.067	ENSONIG00000005563	cstf3	100	97.067	Oreochromis_niloticus
ENSSMAG00000002197	cstf3	90	89.846	ENSOANG00000015140	CSTF3	100	89.846	Ornithorhynchus_anatinus
ENSSMAG00000002197	cstf3	100	89.972	ENSOCUG00000015417	CSTF3	100	89.972	Oryctolagus_cuniculus
ENSSMAG00000002197	cstf3	100	94.693	ENSORLG00000009762	cstf3	100	94.693	Oryzias_latipes
ENSSMAG00000002197	cstf3	100	94.693	ENSORLG00020005540	cstf3	100	94.693	Oryzias_latipes_hni
ENSSMAG00000002197	cstf3	100	94.553	ENSORLG00015003551	cstf3	100	94.553	Oryzias_latipes_hsok
ENSSMAG00000002197	cstf3	100	95.251	ENSOMEG00000003848	cstf3	100	95.251	Oryzias_melastigma
ENSSMAG00000002197	cstf3	100	89.875	ENSOGAG00000010229	CSTF3	100	89.875	Otolemur_garnettii
ENSSMAG00000002197	cstf3	90	90.513	ENSOARG00000017271	CSTF3	99	90.513	Ovis_aries
ENSSMAG00000002197	cstf3	99	87.571	ENSPPAG00000027358	CSTF3	99	87.571	Pan_paniscus
ENSSMAG00000002197	cstf3	100	90.390	ENSPPRG00000016852	CSTF3	100	90.390	Panthera_pardus
ENSSMAG00000002197	cstf3	100	90.390	ENSPTIG00000008716	CSTF3	100	90.390	Panthera_tigris_altaica
ENSSMAG00000002197	cstf3	100	90.251	ENSPTRG00000003485	CSTF3	100	90.251	Pan_troglodytes
ENSSMAG00000002197	cstf3	100	90.251	ENSPANG00000013722	CSTF3	97	93.764	Papio_anubis
ENSSMAG00000002197	cstf3	100	93.445	ENSPKIG00000023648	cstf3	100	93.445	Paramormyrops_kingsleyae
ENSSMAG00000002197	cstf3	100	90.529	ENSPSIG00000009173	CSTF3	100	90.529	Pelodiscus_sinensis
ENSSMAG00000002197	cstf3	84	98.175	ENSPMGG00000000164	cstf3	99	98.175	Periophthalmus_magnuspinnatus
ENSSMAG00000002197	cstf3	100	90.111	ENSPEMG00000011481	Cstf3	100	90.111	Peromyscus_maniculatus_bairdii
ENSSMAG00000002197	cstf3	96	83.228	ENSPMAG00000007282	cstf3	100	78.750	Petromyzon_marinus
ENSSMAG00000002197	cstf3	99	76.999	ENSPCIG00000030419	-	89	77.279	Phascolarctos_cinereus
ENSSMAG00000002197	cstf3	100	88.317	ENSPCIG00000026406	-	100	90.880	Phascolarctos_cinereus
ENSSMAG00000002197	cstf3	100	96.089	ENSPFOG00000017239	cstf3	100	96.089	Poecilia_formosa
ENSSMAG00000002197	cstf3	100	96.229	ENSPLAG00000009456	cstf3	100	96.229	Poecilia_latipinna
ENSSMAG00000002197	cstf3	100	96.089	ENSPMEG00000010320	cstf3	100	96.089	Poecilia_mexicana
ENSSMAG00000002197	cstf3	100	95.950	ENSPREG00000013549	cstf3	100	95.950	Poecilia_reticulata
ENSSMAG00000002197	cstf3	100	90.251	ENSPPYG00000003375	CSTF3	100	90.251	Pongo_abelii
ENSSMAG00000002197	cstf3	75	95.122	ENSPCAG00000008025	-	71	95.122	Procavia_capensis
ENSSMAG00000002197	cstf3	100	85.237	ENSPCOG00000014417	CSTF3	100	85.237	Propithecus_coquereli
ENSSMAG00000002197	cstf3	100	85.097	ENSPVAG00000002350	CSTF3	100	85.097	Pteropus_vampyrus
ENSSMAG00000002197	cstf3	100	97.207	ENSPNYG00000018259	cstf3	100	97.207	Pundamilia_nyererei
ENSSMAG00000002197	cstf3	100	94.840	ENSPNAG00000020182	cstf3	100	94.840	Pygocentrus_nattereri
ENSSMAG00000002197	cstf3	87	89.920	ENSRNOG00000012089	Cstf3	100	89.920	Rattus_norvegicus
ENSSMAG00000002197	cstf3	99	89.548	ENSRBIG00000044258	CSTF3	100	90.400	Rhinopithecus_bieti
ENSSMAG00000002197	cstf3	100	90.251	ENSRROG00000043450	CSTF3	100	90.400	Rhinopithecus_roxellana
ENSSMAG00000002197	cstf3	100	90.251	ENSSBOG00000024764	CSTF3	98	95.991	Saimiri_boliviensis_boliviensis
ENSSMAG00000002197	cstf3	96	85.714	ENSSHAG00000003135	-	99	81.476	Sarcophilus_harrisii
ENSSMAG00000002197	cstf3	99	91.243	ENSSHAG00000018128	-	99	91.243	Sarcophilus_harrisii
ENSSMAG00000002197	cstf3	100	93.584	ENSSFOG00015022133	cstf3	100	93.584	Scleropages_formosus
ENSSMAG00000002197	cstf3	100	98.464	ENSSDUG00000020426	cstf3	100	98.464	Seriola_dumerili
ENSSMAG00000002197	cstf3	100	98.184	ENSSLDG00000025649	cstf3	100	98.184	Seriola_lalandi_dorsalis
ENSSMAG00000002197	cstf3	100	89.972	ENSSARG00000000391	CSTF3	100	89.972	Sorex_araneus
ENSSMAG00000002197	cstf3	96	90.738	ENSSPUG00000010546	CSTF3	100	90.738	Sphenodon_punctatus
ENSSMAG00000002197	cstf3	100	98.184	ENSSPAG00000004958	cstf3	100	98.184	Stegastes_partitus
ENSSMAG00000002197	cstf3	96	93.600	ENSSSCG00000040954	CSTF3	99	90.182	Sus_scrofa
ENSSMAG00000002197	cstf3	99	90.678	ENSTGUG00000005010	CSTF3	100	90.678	Taeniopygia_guttata
ENSSMAG00000002197	cstf3	100	95.531	ENSTRUG00000004959	cstf3	100	95.531	Takifugu_rubripes
ENSSMAG00000002197	cstf3	99	96.186	ENSTNIG00000013811	cstf3	99	96.186	Tetraodon_nigroviridis
ENSSMAG00000002197	cstf3	85	94.404	ENSTBEG00000001544	CSTF3	90	87.850	Tupaia_belangeri
ENSSMAG00000002197	cstf3	100	87.465	ENSTTRG00000016366	CSTF3	100	87.465	Tursiops_truncatus
ENSSMAG00000002197	cstf3	99	90.678	ENSUMAG00000018971	CSTF3	100	90.080	Ursus_maritimus
ENSSMAG00000002197	cstf3	100	90.111	ENSVPAG00000007800	CSTF3	100	90.111	Vicugna_pacos
ENSSMAG00000002197	cstf3	99	90.960	ENSVVUG00000014938	CSTF3	100	90.400	Vulpes_vulpes
ENSSMAG00000002197	cstf3	88	75.156	ENSXETG00000021399	cstf3	100	76.214	Xenopus_tropicalis
ENSSMAG00000002197	cstf3	72	42.116	ENSXETG00000017946	-	99	42.116	Xenopus_tropicalis
ENSSMAG00000002197	cstf3	87	95.827	ENSXCOG00000011741	cstf3	100	95.827	Xiphophorus_couchianus
ENSSMAG00000002197	cstf3	100	95.950	ENSXMAG00000009545	cstf3	100	95.950	Xiphophorus_maculatus