EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000002229 (Gene tree)
Gene ID: -
Gene Symbol: zgc:101559
Alias: -
Full Name: zgc:101559
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 2732 bases
Position: chr14:16411294-16414025
Accession: ZDB-GENE-041114-122
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000003566	MMR_HSR1	PF01926.23	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000003628	-	1887	-	ENSSMAP00000003566	236 (aa)	-	A0A2U9CEU6

Gene Model

Click here to download ENSSMAG00000002229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000002229's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000002229	zgc:101559	66	44.025	ENSSMAG00000001953	rab39bb	74	44.025
ENSSMAG00000002229	zgc:101559	79	62.366	ENSSMAG00000015955	rab33ba	81	61.224
ENSSMAG00000002229	zgc:101559	73	40.571	ENSSMAG00000016376	-	85	40.571
ENSSMAG00000002229	zgc:101559	66	48.718	ENSSMAG00000000660	rab35b	97	41.919
ENSSMAG00000002229	zgc:101559	95	54.464	ENSSMAG00000013733	rab33a	82	54.464
ENSSMAG00000002229	zgc:101559	67	34.146	ENSSMAG00000014061	rasl11b	75	33.333
ENSSMAG00000002229	zgc:101559	62	33.784	ENSSMAG00000001964	rhebl1	79	33.784
ENSSMAG00000002229	zgc:101559	76	35.196	ENSSMAG00000007370	kras	92	35.196
ENSSMAG00000002229	zgc:101559	78	38.919	ENSSMAG00000007323	rab5c	82	38.919
ENSSMAG00000002229	zgc:101559	85	36.842	ENSSMAG00000011579	RAB7A	97	36.842
ENSSMAG00000002229	zgc:101559	71	46.429	ENSSMAG00000017528	rab1ab	81	46.429
ENSSMAG00000002229	zgc:101559	84	33.668	ENSSMAG00000008745	hrasb	97	33.668
ENSSMAG00000002229	zgc:101559	68	38.750	ENSSMAG00000016183	rab25b	73	38.750
ENSSMAG00000002229	zgc:101559	63	43.243	ENSSMAG00000011814	rab18b	71	43.243
ENSSMAG00000002229	zgc:101559	66	32.738	ENSSMAG00000002148	rasl11a	63	32.738
ENSSMAG00000002229	zgc:101559	69	39.053	ENSSMAG00000001414	-	70	39.053
ENSSMAG00000002229	zgc:101559	67	41.139	ENSSMAG00000001002	rab2a	74	41.139
ENSSMAG00000002229	zgc:101559	61	31.757	ENSSMAG00000014329	si:cabz01085950.1	71	31.757
ENSSMAG00000002229	zgc:101559	74	38.547	ENSSMAG00000005651	-	78	38.547
ENSSMAG00000002229	zgc:101559	62	34.459	ENSSMAG00000013303	rheb	79	34.459
ENSSMAG00000002229	zgc:101559	62	43.537	ENSSMAG00000019773	rab15	68	43.537
ENSSMAG00000002229	zgc:101559	79	35.829	ENSSMAG00000012678	rab12	77	35.417
ENSSMAG00000002229	zgc:101559	63	34.211	ENSSMAG00000017426	rab9a	71	34.211
ENSSMAG00000002229	zgc:101559	63	43.624	ENSSMAG00000017205	-	71	43.624
ENSSMAG00000002229	zgc:101559	62	42.857	ENSSMAG00000002969	rab18a	71	42.568
ENSSMAG00000002229	zgc:101559	50	35.897	ENSSMAG00000004606	rabl2	51	35.897
ENSSMAG00000002229	zgc:101559	84	42.654	ENSSMAG00000004416	-	96	42.654
ENSSMAG00000002229	zgc:101559	63	33.775	ENSSMAG00000014078	RAB9A	75	33.775
ENSSMAG00000002229	zgc:101559	62	41.892	ENSSMAG00000020311	rab42a	67	41.892
ENSSMAG00000002229	zgc:101559	74	42.857	ENSSMAG00000002569	-	95	38.889
ENSSMAG00000002229	zgc:101559	72	37.791	ENSSMAG00000013945	si:dkey-13a21.4	81	37.791
ENSSMAG00000002229	zgc:101559	63	44.966	ENSSMAG00000015774	rab41	70	44.966
ENSSMAG00000002229	zgc:101559	78	39.130	ENSSMAG00000018613	-	83	39.130
ENSSMAG00000002229	zgc:101559	72	37.059	ENSSMAG00000018454	-	77	37.059
ENSSMAG00000002229	zgc:101559	72	41.520	ENSSMAG00000009229	rab5aa	79	41.520
ENSSMAG00000002229	zgc:101559	74	37.931	ENSSMAG00000000335	rab6bb	89	37.569
ENSSMAG00000002229	zgc:101559	65	37.342	ENSSMAG00000006709	rab9b	75	37.342
ENSSMAG00000002229	zgc:101559	78	44.865	ENSSMAG00000021049	-	89	44.865
ENSSMAG00000002229	zgc:101559	77	39.459	ENSSMAG00000011769	si:dkey-16l2.16	86	38.462
ENSSMAG00000002229	zgc:101559	71	47.305	ENSSMAG00000002500	rab30	81	47.305
ENSSMAG00000002229	zgc:101559	51	43.333	ENSSMAG00000019926	rab34b	51	43.333
ENSSMAG00000002229	zgc:101559	73	33.526	ENSSMAG00000004806	si:ch73-116o1.2	90	32.292
ENSSMAG00000002229	zgc:101559	72	37.647	ENSSMAG00000003166	rab14	77	37.647
ENSSMAG00000002229	zgc:101559	79	51.456	ENSSMAG00000012178	-	83	51.456
ENSSMAG00000002229	zgc:101559	78	40.217	ENSSMAG00000004922	rab11bb	83	40.217
ENSSMAG00000002229	zgc:101559	84	38.119	ENSSMAG00000010140	rab22a	98	38.119
ENSSMAG00000002229	zgc:101559	71	45.833	ENSSMAG00000009201	rab1ba	81	45.833
ENSSMAG00000002229	zgc:101559	89	37.736	ENSSMAG00000004133	rab11a	97	37.736
ENSSMAG00000002229	zgc:101559	56	38.636	ENSSMAG00000020045	rab36	50	38.636
ENSSMAG00000002229	zgc:101559	65	41.558	ENSSMAG00000009722	rab25a	72	41.558
ENSSMAG00000002229	zgc:101559	73	33.333	ENSSMAG00000006341	rab23	75	33.871
ENSSMAG00000002229	zgc:101559	83	36.410	ENSSMAG00000016206	rab11al	89	36.410

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000002229	zgc:101559	99	85.837	ENSAPOG00000007503	zgc:101559	99	85.837	Acanthochromis_polyacanthus
ENSSMAG00000002229	zgc:101559	86	87.255	ENSACIG00000021459	zgc:101559	89	87.255	Amphilophus_citrinellus
ENSSMAG00000002229	zgc:101559	99	85.837	ENSAOCG00000024675	zgc:101559	99	85.837	Amphiprion_ocellaris
ENSSMAG00000002229	zgc:101559	99	85.837	ENSAPEG00000005176	zgc:101559	99	85.837	Amphiprion_percula
ENSSMAG00000002229	zgc:101559	100	81.356	ENSATEG00000007761	zgc:101559	100	81.356	Anabas_testudineus
ENSSMAG00000002229	zgc:101559	97	83.043	ENSACLG00000027006	zgc:101559	97	83.043	Astatotilapia_calliptera
ENSSMAG00000002229	zgc:101559	99	70.085	ENSAMXG00000040460	zgc:101559	93	70.085	Astyanax_mexicanus
ENSSMAG00000002229	zgc:101559	98	78.355	ENSCSEG00000006243	zgc:101559	98	78.355	Cynoglossus_semilaevis
ENSSMAG00000002229	zgc:101559	99	81.116	ENSCVAG00000019227	zgc:101559	99	81.116	Cyprinodon_variegatus
ENSSMAG00000002229	zgc:101559	99	71.368	ENSDARG00000003257	zgc:101559	100	71.368	Danio_rerio
ENSSMAG00000002229	zgc:101559	99	79.399	ENSFHEG00000011483	zgc:101559	99	79.399	Fundulus_heteroclitus
ENSSMAG00000002229	zgc:101559	89	78.095	ENSGMOG00000011665	zgc:101559	99	78.095	Gadus_morhua
ENSSMAG00000002229	zgc:101559	99	81.116	ENSGAFG00000021202	zgc:101559	99	81.116	Gambusia_affinis
ENSSMAG00000002229	zgc:101559	89	84.286	ENSGACG00000001725	zgc:101559	90	84.286	Gasterosteus_aculeatus
ENSSMAG00000002229	zgc:101559	99	83.691	ENSHBUG00000007827	zgc:101559	99	83.691	Haplochromis_burtoni
ENSSMAG00000002229	zgc:101559	99	75.745	ENSHCOG00000009133	zgc:101559	99	76.371	Hippocampus_comes
ENSSMAG00000002229	zgc:101559	87	72.683	ENSIPUG00000022394	zgc:101559	89	72.683	Ictalurus_punctatus
ENSSMAG00000002229	zgc:101559	98	78.448	ENSKMAG00000002862	zgc:101559	98	78.448	Kryptolebias_marmoratus
ENSSMAG00000002229	zgc:101559	99	84.549	ENSLBEG00000025798	zgc:101559	99	84.549	Labrus_bergylta
ENSSMAG00000002229	zgc:101559	86	63.366	ENSLACG00000011557	zgc:101559	87	63.366	Latimeria_chalumnae
ENSSMAG00000002229	zgc:101559	89	71.905	ENSLOCG00000005904	zgc:101559	89	71.905	Lepisosteus_oculatus
ENSSMAG00000002229	zgc:101559	99	82.833	ENSMAMG00000017431	zgc:101559	99	82.833	Mastacembelus_armatus
ENSSMAG00000002229	zgc:101559	99	83.691	ENSMZEG00005021778	zgc:101559	99	83.691	Maylandia_zebra
ENSSMAG00000002229	zgc:101559	99	81.116	ENSMMOG00000019779	zgc:101559	99	81.116	Mola_mola
ENSSMAG00000002229	zgc:101559	100	80.508	ENSMALG00000003712	zgc:101559	100	80.508	Monopterus_albus
ENSSMAG00000002229	zgc:101559	99	82.833	ENSNBRG00000002684	zgc:101559	99	82.833	Neolamprologus_brichardi
ENSSMAG00000002229	zgc:101559	99	83.691	ENSONIG00000006715	-	99	83.691	Oreochromis_niloticus
ENSSMAG00000002229	zgc:101559	98	79.310	ENSORLG00000030642	zgc:101559	99	79.310	Oryzias_latipes
ENSSMAG00000002229	zgc:101559	98	78.448	ENSORLG00020012685	zgc:101559	99	78.448	Oryzias_latipes_hni
ENSSMAG00000002229	zgc:101559	98	78.879	ENSORLG00015016047	zgc:101559	99	78.879	Oryzias_latipes_hsok
ENSSMAG00000002229	zgc:101559	98	81.466	ENSOMEG00000013128	zgc:101559	99	81.466	Oryzias_melastigma
ENSSMAG00000002229	zgc:101559	95	70.222	ENSPKIG00000013397	zgc:101559	94	70.222	Paramormyrops_kingsleyae
ENSSMAG00000002229	zgc:101559	99	81.545	ENSPFOG00000009101	-	99	81.545	Poecilia_formosa
ENSSMAG00000002229	zgc:101559	99	81.545	ENSPLAG00000020627	zgc:101559	99	81.545	Poecilia_latipinna
ENSSMAG00000002229	zgc:101559	99	81.974	ENSPMEG00000010152	zgc:101559	99	81.974	Poecilia_mexicana
ENSSMAG00000002229	zgc:101559	99	81.116	ENSPREG00000007017	zgc:101559	99	81.116	Poecilia_reticulata
ENSSMAG00000002229	zgc:101559	99	83.691	ENSPNYG00000012922	zgc:101559	99	83.691	Pundamilia_nyererei
ENSSMAG00000002229	zgc:101559	100	69.492	ENSPNAG00000017856	zgc:101559	100	69.492	Pygocentrus_nattereri
ENSSMAG00000002229	zgc:101559	95	69.778	ENSSFOG00015006175	zgc:101559	96	69.778	Scleropages_formosus
ENSSMAG00000002229	zgc:101559	99	87.554	ENSSDUG00000008151	zgc:101559	99	87.554	Seriola_dumerili
ENSSMAG00000002229	zgc:101559	99	87.554	ENSSLDG00000019214	zgc:101559	99	87.554	Seriola_lalandi_dorsalis
ENSSMAG00000002229	zgc:101559	99	85.837	ENSSPAG00000006404	zgc:101559	99	85.837	Stegastes_partitus
ENSSMAG00000002229	zgc:101559	99	80.258	ENSTRUG00000009903	zgc:101559	99	80.258	Takifugu_rubripes
ENSSMAG00000002229	zgc:101559	92	80.275	ENSTNIG00000015000	zgc:101559	93	80.000	Tetraodon_nigroviridis
ENSSMAG00000002229	zgc:101559	99	81.974	ENSXCOG00000018683	zgc:101559	99	81.974	Xiphophorus_couchianus
ENSSMAG00000002229	zgc:101559	99	81.974	ENSXMAG00000011171	zgc:101559	99	81.974	Xiphophorus_maculatus