EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000002232 (Gene tree)
Gene ID: -
Gene Symbol: SRL (1 of many)
Alias: SAR
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 15281 bases
Position: chr8:16750420-16765700
Accession: 11295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000003572	MMR_HSR1	PF01926.23	2.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000003635	SRL (1 of many)-201	4404	-	ENSSMAP00000003572	914 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000002232's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000002232's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000002232	SRL	50	75.385	ENSSMAG00000016274	srl	96	75.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000002232	SRL	50	72.308	ENSG00000185739	SRL	99	73.756	Homo_sapiens
ENSSMAG00000002232	SRL	50	75.385	ENSAPOG00000018093	srl	99	75.165	Acanthochromis_polyacanthus
ENSSMAG00000002232	SRL	61	79.501	ENSAPOG00000012432	SRL	99	86.334	Acanthochromis_polyacanthus
ENSSMAG00000002232	SRL	50	72.088	ENSAMEG00000010862	SRL	50	73.085	Ailuropoda_melanoleuca
ENSSMAG00000002232	SRL	50	75.385	ENSACIG00000015799	srl	98	75.385	Amphilophus_citrinellus
ENSSMAG00000002232	SRL	50	84.835	ENSACIG00000015419	SRL	98	84.835	Amphilophus_citrinellus
ENSSMAG00000002232	SRL	51	87.339	ENSAOCG00000017049	SRL	98	87.124	Amphiprion_ocellaris
ENSSMAG00000002232	SRL	50	75.165	ENSAPEG00000006911	srl	94	75.165	Amphiprion_percula
ENSSMAG00000002232	SRL	51	83.476	ENSAPEG00000006533	SRL	98	83.906	Amphiprion_percula
ENSSMAG00000002232	SRL	50	75.165	ENSATEG00000024315	srl	94	75.165	Anabas_testudineus
ENSSMAG00000002232	SRL	71	73.830	ENSATEG00000009643	SRL	74	77.864	Anabas_testudineus
ENSSMAG00000002232	SRL	50	71.092	ENSACAG00000016380	SRL	83	70.878	Anolis_carolinensis
ENSSMAG00000002232	SRL	50	75.165	ENSACLG00000027685	srl	97	75.165	Astatotilapia_calliptera
ENSSMAG00000002232	SRL	100	61.530	ENSACLG00000024674	SRL	68	87.192	Astatotilapia_calliptera
ENSSMAG00000002232	SRL	50	76.652	ENSAMXG00000018789	srl	86	76.652	Astyanax_mexicanus
ENSSMAG00000002232	SRL	50	71.806	ENSBTAG00000001078	SRL	56	72.807	Bos_taurus
ENSSMAG00000002232	SRL	50	72.527	ENSCJAG00000019750	SRL	93	73.742	Callithrix_jacchus
ENSSMAG00000002232	SRL	50	72.088	ENSCAFG00000019233	SRL	82	73.085	Canis_familiaris
ENSSMAG00000002232	SRL	50	72.088	ENSCAFG00020025024	SRL	54	73.085	Canis_lupus_dingo
ENSSMAG00000002232	SRL	50	71.806	ENSCHIG00000017927	SRL	55	72.807	Capra_hircus
ENSSMAG00000002232	SRL	50	72.747	ENSTSYG00000007919	SRL	99	74.208	Carlito_syrichta
ENSSMAG00000002232	SRL	50	72.088	ENSCPOG00000012643	SRL	93	73.304	Cavia_porcellus
ENSSMAG00000002232	SRL	50	68.352	ENSCCAG00000032646	SRL	100	74.430	Cebus_capucinus
ENSSMAG00000002232	SRL	50	72.527	ENSCATG00000032227	-	93	73.523	Cercocebus_atys
ENSSMAG00000002232	SRL	50	71.868	ENSCLAG00000016242	SRL	93	73.085	Chinchilla_lanigera
ENSSMAG00000002232	SRL	50	74.627	ENSCPBG00000026371	SRL	93	71.030	Chrysemys_picta_bellii
ENSSMAG00000002232	SRL	50	72.308	ENSCANG00000035872	SRL	99	73.756	Colobus_angolensis_palliatus
ENSSMAG00000002232	SRL	50	73.187	ENSCGRG00001016630	Srl	93	73.304	Cricetulus_griseus_chok1gshd
ENSSMAG00000002232	SRL	50	73.187	ENSCGRG00000005458	Srl	93	73.304	Cricetulus_griseus_crigri
ENSSMAG00000002232	SRL	50	74.066	ENSCSEG00000016151	srl	96	73.002	Cynoglossus_semilaevis
ENSSMAG00000002232	SRL	52	85.350	ENSCSEG00000011866	SRL	92	85.350	Cynoglossus_semilaevis
ENSSMAG00000002232	SRL	50	75.824	ENSCVAG00000003513	srl	95	75.824	Cyprinodon_variegatus
ENSSMAG00000002232	SRL	67	83.019	ENSCVAG00000022465	SRL	83	74.725	Cyprinodon_variegatus
ENSSMAG00000002232	SRL	50	76.484	ENSDARG00000104587	srl	94	76.484	Danio_rerio
ENSSMAG00000002232	SRL	50	72.308	ENSDNOG00000011643	SRL	53	73.304	Dasypus_novemcinctus
ENSSMAG00000002232	SRL	50	72.088	ENSDORG00000014807	Srl	93	72.867	Dipodomys_ordii
ENSSMAG00000002232	SRL	50	72.026	ENSEASG00005000942	SRL	53	73.026	Equus_asinus_asinus
ENSSMAG00000002232	SRL	50	71.806	ENSECAG00000024219	SRL	93	73.026	Equus_caballus
ENSSMAG00000002232	SRL	50	73.629	ENSELUG00000015616	srl	95	73.207	Esox_lucius
ENSSMAG00000002232	SRL	99	51.809	ENSELUG00000022266	SRL	64	66.879	Esox_lucius
ENSSMAG00000002232	SRL	50	72.088	ENSFCAG00000022075	SRL	93	73.085	Felis_catus
ENSSMAG00000002232	SRL	50	72.088	ENSFDAG00000006199	SRL	93	73.304	Fukomys_damarensis
ENSSMAG00000002232	SRL	50	75.165	ENSFHEG00000011239	srl	95	75.165	Fundulus_heteroclitus
ENSSMAG00000002232	SRL	100	60.392	ENSFHEG00000011854	SRL	99	83.514	Fundulus_heteroclitus
ENSSMAG00000002232	SRL	50	74.893	ENSGMOG00000014954	srl	99	74.893	Gadus_morhua
ENSSMAG00000002232	SRL	50	72.247	ENSGALG00000038884	SRL	93	72.026	Gallus_gallus
ENSSMAG00000002232	SRL	50	75.165	ENSGAFG00000000010	srl	96	75.165	Gambusia_affinis
ENSSMAG00000002232	SRL	97	59.910	ENSGAFG00000016984	SRL	100	84.267	Gambusia_affinis
ENSSMAG00000002232	SRL	50	73.391	ENSGACG00000011332	srl	99	73.391	Gasterosteus_aculeatus
ENSSMAG00000002232	SRL	50	72.527	ENSGGOG00000011312	-	93	73.523	Gorilla_gorilla
ENSSMAG00000002232	SRL	50	75.165	ENSHBUG00000007581	srl	97	75.165	Haplochromis_burtoni
ENSSMAG00000002232	SRL	50	72.308	ENSHGLG00000015271	SRL	93	73.523	Heterocephalus_glaber_female
ENSSMAG00000002232	SRL	50	72.308	ENSHGLG00100019378	SRL	93	73.523	Heterocephalus_glaber_male
ENSSMAG00000002232	SRL	100	59.343	ENSHCOG00000001012	SRL	71	68.875	Hippocampus_comes
ENSSMAG00000002232	SRL	50	74.725	ENSHCOG00000008687	srl	98	74.725	Hippocampus_comes
ENSSMAG00000002232	SRL	50	73.085	ENSIPUG00000011609	SRL	99	72.867	Ictalurus_punctatus
ENSSMAG00000002232	SRL	50	75.385	ENSIPUG00000012513	srl	94	75.385	Ictalurus_punctatus
ENSSMAG00000002232	SRL	50	72.527	ENSSTOG00000021151	-	93	73.523	Ictidomys_tridecemlineatus
ENSSMAG00000002232	SRL	50	71.868	ENSJJAG00000016400	Srl	93	73.085	Jaculus_jaculus
ENSSMAG00000002232	SRL	50	73.742	ENSKMAG00000014115	srl	98	73.742	Kryptolebias_marmoratus
ENSSMAG00000002232	SRL	67	79.670	ENSKMAG00000019537	SRL	100	85.714	Kryptolebias_marmoratus
ENSSMAG00000002232	SRL	50	87.852	ENSLBEG00000013811	SRL	97	87.636	Labrus_bergylta
ENSSMAG00000002232	SRL	50	74.348	ENSLBEG00000026643	srl	95	74.348	Labrus_bergylta
ENSSMAG00000002232	SRL	50	72.747	ENSLACG00000002825	SRL	98	72.308	Latimeria_chalumnae
ENSSMAG00000002232	SRL	50	76.484	ENSLOCG00000002644	srl	94	75.824	Lepisosteus_oculatus
ENSSMAG00000002232	SRL	50	72.308	ENSLAFG00000006329	SRL	50	73.304	Loxodonta_africana
ENSSMAG00000002232	SRL	50	72.527	ENSMNEG00000019236	-	93	73.523	Macaca_nemestrina
ENSSMAG00000002232	SRL	50	66.374	ENSMLEG00000032156	SRL	93	67.615	Mandrillus_leucophaeus
ENSSMAG00000002232	SRL	50	75.165	ENSMAMG00000023322	srl	94	75.165	Mastacembelus_armatus
ENSSMAG00000002232	SRL	97	68.071	ENSMAMG00000013756	SRL	70	79.734	Mastacembelus_armatus
ENSSMAG00000002232	SRL	50	75.165	ENSMZEG00005004548	srl	97	75.165	Maylandia_zebra
ENSSMAG00000002232	SRL	50	72.247	ENSMGAG00000009342	SRL	94	77.807	Meleagris_gallopavo
ENSSMAG00000002232	SRL	50	72.210	ENSMICG00000032307	SRL	94	73.203	Microcebus_murinus
ENSSMAG00000002232	SRL	50	71.648	ENSMOCG00000008208	Srl	93	72.867	Microtus_ochrogaster
ENSSMAG00000002232	SRL	50	74.725	ENSMMOG00000013970	srl	98	74.725	Mola_mola
ENSSMAG00000002232	SRL	50	85.106	ENSMMOG00000021572	SRL	99	84.255	Mola_mola
ENSSMAG00000002232	SRL	50	74.725	ENSMALG00000005039	srl	98	74.725	Monopterus_albus
ENSSMAG00000002232	SRL	50	73.085	MGP_CAROLIEiJ_G0020400	Srl	93	72.747	Mus_caroli
ENSSMAG00000002232	SRL	50	73.085	ENSMUSG00000022519	Srl	93	72.747	Mus_musculus
ENSSMAG00000002232	SRL	50	73.085	MGP_SPRETEiJ_G0021294	Srl	93	72.747	Mus_spretus
ENSSMAG00000002232	SRL	50	72.088	ENSMPUG00000015025	SRL	53	73.085	Mustela_putorius_furo
ENSSMAG00000002232	SRL	50	72.527	ENSMLUG00000030733	SRL	55	73.523	Myotis_lucifugus
ENSSMAG00000002232	SRL	50	72.088	ENSNGAG00000019741	Srl	93	73.304	Nannospalax_galili
ENSSMAG00000002232	SRL	50	75.165	ENSNBRG00000023775	srl	94	75.165	Neolamprologus_brichardi
ENSSMAG00000002232	SRL	100	61.311	ENSNBRG00000002422	SRL	82	73.404	Neolamprologus_brichardi
ENSSMAG00000002232	SRL	50	67.692	ENSNLEG00000029051	SRL	93	68.928	Nomascus_leucogenys
ENSSMAG00000002232	SRL	50	67.473	ENSOPRG00000000477	-	52	68.490	Ochotona_princeps
ENSSMAG00000002232	SRL	50	72.308	ENSODEG00000013256	SRL	93	73.523	Octodon_degus
ENSSMAG00000002232	SRL	50	74.945	ENSONIG00000005192	srl	94	74.945	Oreochromis_niloticus
ENSSMAG00000002232	SRL	88	75.304	ENSORLG00000015064	SRL	98	84.267	Oryzias_latipes
ENSSMAG00000002232	SRL	50	75.604	ENSORLG00000008291	srl	93	76.471	Oryzias_latipes
ENSSMAG00000002232	SRL	50	85.466	ENSORLG00020018173	SRL	98	84.052	Oryzias_latipes_hni
ENSSMAG00000002232	SRL	50	75.385	ENSORLG00020019784	srl	81	76.225	Oryzias_latipes_hni
ENSSMAG00000002232	SRL	50	85.466	ENSORLG00015019063	SRL	98	85.466	Oryzias_latipes_hsok
ENSSMAG00000002232	SRL	50	75.165	ENSORLG00015009342	srl	91	75.165	Oryzias_latipes_hsok
ENSSMAG00000002232	SRL	62	83.610	ENSOMEG00000005682	SRL	55	84.134	Oryzias_melastigma
ENSSMAG00000002232	SRL	50	75.824	ENSOMEG00000010006	srl	98	75.771	Oryzias_melastigma
ENSSMAG00000002232	SRL	50	71.335	ENSOGAG00000029266	SRL	54	72.331	Otolemur_garnettii
ENSSMAG00000002232	SRL	50	71.806	ENSOARG00000003074	SRL	55	72.807	Ovis_aries
ENSSMAG00000002232	SRL	50	72.527	ENSPPAG00000024919	-	99	73.756	Pan_paniscus
ENSSMAG00000002232	SRL	50	71.868	ENSPPRG00000010274	SRL	99	73.303	Panthera_pardus
ENSSMAG00000002232	SRL	50	71.868	ENSPTIG00000015162	SRL	99	73.303	Panthera_tigris_altaica
ENSSMAG00000002232	SRL	50	72.527	ENSPTRG00000007712	SRL	99	73.756	Pan_troglodytes
ENSSMAG00000002232	SRL	50	72.308	ENSPANG00000013804	SRL	95	73.523	Papio_anubis
ENSSMAG00000002232	SRL	50	78.242	ENSPKIG00000006405	srl	93	78.242	Paramormyrops_kingsleyae
ENSSMAG00000002232	SRL	100	49.235	ENSPKIG00000024974	SRL	88	73.961	Paramormyrops_kingsleyae
ENSSMAG00000002232	SRL	50	75.824	ENSPMGG00000021081	srl	95	75.824	Periophthalmus_magnuspinnatus
ENSSMAG00000002232	SRL	50	83.736	ENSPMGG00000023505	-	99	83.297	Periophthalmus_magnuspinnatus
ENSSMAG00000002232	SRL	50	71.868	ENSPEMG00000015842	Srl	93	73.085	Peromyscus_maniculatus_bairdii
ENSSMAG00000002232	SRL	50	74.009	ENSPCIG00000012128	SRL	96	74.009	Phascolarctos_cinereus
ENSSMAG00000002232	SRL	50	73.233	ENSPFOG00000011408	srl	93	73.233	Poecilia_formosa
ENSSMAG00000002232	SRL	50	74.945	ENSPLAG00000008017	srl	96	74.945	Poecilia_latipinna
ENSSMAG00000002232	SRL	72	73.102	ENSPLAG00000002932	SRL	100	82.937	Poecilia_latipinna
ENSSMAG00000002232	SRL	50	74.945	ENSPMEG00000006745	srl	96	74.945	Poecilia_mexicana
ENSSMAG00000002232	SRL	72	72.937	ENSPMEG00000005890	SRL	83	73.134	Poecilia_mexicana
ENSSMAG00000002232	SRL	50	75.165	ENSPREG00000007751	srl	98	75.165	Poecilia_reticulata
ENSSMAG00000002232	SRL	93	74.536	ENSPREG00000000315	SRL	100	83.369	Poecilia_reticulata
ENSSMAG00000002232	SRL	50	72.467	ENSPCAG00000003378	-	50	73.465	Procavia_capensis
ENSSMAG00000002232	SRL	50	71.991	ENSPCOG00000023135	SRL	99	73.756	Propithecus_coquereli
ENSSMAG00000002232	SRL	50	72.527	ENSPVAG00000006586	SRL	54	73.523	Pteropus_vampyrus
ENSSMAG00000002232	SRL	50	75.165	ENSPNYG00000001200	srl	97	75.165	Pundamilia_nyererei
ENSSMAG00000002232	SRL	50	77.440	ENSPNAG00000007361	-	92	77.223	Pygocentrus_nattereri
ENSSMAG00000002232	SRL	50	75.165	ENSPNAG00000023106	srl	94	75.165	Pygocentrus_nattereri
ENSSMAG00000002232	SRL	50	72.747	ENSSBOG00000029273	SRL	93	73.742	Saimiri_boliviensis_boliviensis
ENSSMAG00000002232	SRL	50	76.484	ENSSFOG00015009773	srl	94	76.368	Scleropages_formosus
ENSSMAG00000002232	SRL	51	87.021	ENSSDUG00000009161	SRL	100	87.021	Seriola_dumerili
ENSSMAG00000002232	SRL	50	73.820	ENSSDUG00000010808	srl	99	73.820	Seriola_dumerili
ENSSMAG00000002232	SRL	50	91.466	ENSSLDG00000014601	SRL	100	91.685	Seriola_lalandi_dorsalis
ENSSMAG00000002232	SRL	50	74.945	ENSSLDG00000022024	srl	95	74.945	Seriola_lalandi_dorsalis
ENSSMAG00000002232	SRL	50	72.088	ENSSPUG00000016859	SRL	97	71.868	Sphenodon_punctatus
ENSSMAG00000002232	SRL	50	85.466	ENSSPAG00000014254	SRL	99	85.466	Stegastes_partitus
ENSSMAG00000002232	SRL	50	74.945	ENSSPAG00000019105	srl	93	74.945	Stegastes_partitus
ENSSMAG00000002232	SRL	50	72.687	ENSSSCG00000007949	SRL	98	73.684	Sus_scrofa
ENSSMAG00000002232	SRL	50	72.247	ENSTGUG00000003951	-	99	71.058	Taeniopygia_guttata
ENSSMAG00000002232	SRL	67	72.677	ENSTRUG00000013310	SRL	87	75.472	Takifugu_rubripes
ENSSMAG00000002232	SRL	50	74.505	ENSTRUG00000006005	srl	94	74.505	Takifugu_rubripes
ENSSMAG00000002232	SRL	50	74.286	ENSTNIG00000009739	srl	94	74.286	Tetraodon_nigroviridis
ENSSMAG00000002232	SRL	50	72.088	ENSUAMG00000005701	SRL	55	73.085	Ursus_americanus
ENSSMAG00000002232	SRL	50	72.088	ENSUMAG00000002574	SRL	54	73.085	Ursus_maritimus
ENSSMAG00000002232	SRL	50	74.066	ENSXETG00000017313	srl	98	73.846	Xenopus_tropicalis
ENSSMAG00000002232	SRL	51	84.233	ENSXCOG00000014584	SRL	99	84.052	Xiphophorus_couchianus
ENSSMAG00000002232	SRL	72	73.147	ENSXMAG00000027598	SRL	86	74.000	Xiphophorus_maculatus
ENSSMAG00000002232	SRL	50	75.385	ENSXMAG00000004625	srl	89	75.385	Xiphophorus_maculatus