EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000002403 (Gene tree)
Gene ID: -
Gene Symbol: rabl3
Alias: fb40b02|wu:fb40b02|zgc:100876
Full Name: RAB%2C member of RAS oncogene family-like 3
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 4756 bases
Position: chr14:3421313-3426068
Accession: ZDB-GENE-040808-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000003889	MMR_HSR1	PF01926.23	2.1e-05	1	1
ENSSMAP00000003868	MMR_HSR1	PF01926.23	2.5e-05	1	1
ENSSMAP00000003855	MMR_HSR1	PF01926.23	2.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000003932	-	1749	-	ENSSMAP00000003868	234 (aa)	-	A0A2U9C859
ENSSMAT00000003920	-	1674	-	ENSSMAP00000003855	221 (aa)	-	-
ENSSMAT00000003954	-	636	-	ENSSMAP00000003889	211 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000002403's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000002403's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000002403	rabl3	59	31.298	ENSSMAG00000001953	rab39bb	58	31.298
ENSSMAG00000002403	rabl3	72	30.921	ENSSMAG00000012178	-	51	30.921

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000002403	rabl3	100	84.388	ENSG00000144840	RABL3	100	91.473	Homo_sapiens
ENSSMAG00000002403	rabl3	100	97.436	ENSAPOG00000024479	rabl3	100	97.436	Acanthochromis_polyacanthus
ENSSMAG00000002403	rabl3	100	85.232	ENSAMEG00000004809	RABL3	100	85.232	Ailuropoda_melanoleuca
ENSSMAG00000002403	rabl3	100	91.880	ENSACIG00000014343	rabl3	100	91.880	Amphilophus_citrinellus
ENSSMAG00000002403	rabl3	100	97.436	ENSAOCG00000011851	rabl3	100	97.436	Amphiprion_ocellaris
ENSSMAG00000002403	rabl3	100	97.436	ENSAPEG00000011214	rabl3	100	97.436	Amphiprion_percula
ENSSMAG00000002403	rabl3	100	97.009	ENSATEG00000003503	rabl3	100	97.009	Anabas_testudineus
ENSSMAG00000002403	rabl3	100	79.747	ENSACAG00000011313	-	100	79.747	Anolis_carolinensis
ENSSMAG00000002403	rabl3	100	86.498	ENSANAG00000027278	RABL3	100	86.498	Aotus_nancymaae
ENSSMAG00000002403	rabl3	100	96.581	ENSACLG00000009820	rabl3	100	96.581	Astatotilapia_calliptera
ENSSMAG00000002403	rabl3	100	92.735	ENSAMXG00000038716	rabl3	100	92.735	Astyanax_mexicanus
ENSSMAG00000002403	rabl3	100	86.920	ENSBTAG00000015898	RABL3	100	86.920	Bos_taurus
ENSSMAG00000002403	rabl3	100	86.498	ENSCJAG00000008611	RABL3	100	86.498	Callithrix_jacchus
ENSSMAG00000002403	rabl3	100	86.076	ENSCAFG00000011292	RABL3	89	86.076	Canis_familiaris
ENSSMAG00000002403	rabl3	100	86.076	ENSCAFG00020006397	RABL3	100	86.076	Canis_lupus_dingo
ENSSMAG00000002403	rabl3	100	86.920	ENSCHIG00000017365	RABL3	100	86.920	Capra_hircus
ENSSMAG00000002403	rabl3	100	84.810	ENSCPOG00000009645	RABL3	100	84.810	Cavia_porcellus
ENSSMAG00000002403	rabl3	100	84.810	ENSCATG00000032561	RABL3	100	84.810	Cercocebus_atys
ENSSMAG00000002403	rabl3	100	84.388	ENSCLAG00000010855	RABL3	100	84.388	Chinchilla_lanigera
ENSSMAG00000002403	rabl3	99	84.615	ENSCSAG00000007155	RABL3	100	84.615	Chlorocebus_sabaeus
ENSSMAG00000002403	rabl3	100	86.076	ENSCPBG00000001999	RABL3	100	86.076	Chrysemys_picta_bellii
ENSSMAG00000002403	rabl3	100	84.810	ENSCANG00000031684	RABL3	100	84.810	Colobus_angolensis_palliatus
ENSSMAG00000002403	rabl3	100	82.278	ENSCGRG00001021537	Rabl3	100	82.278	Cricetulus_griseus_chok1gshd
ENSSMAG00000002403	rabl3	100	82.278	ENSCGRG00000002114	Rabl3	100	82.278	Cricetulus_griseus_crigri
ENSSMAG00000002403	rabl3	100	90.047	ENSCSEG00000014982	rabl3	100	90.047	Cynoglossus_semilaevis
ENSSMAG00000002403	rabl3	100	86.730	ENSCVAG00000009904	rabl3	100	86.730	Cyprinodon_variegatus
ENSSMAG00000002403	rabl3	100	92.308	ENSDARG00000040959	rabl3	100	92.308	Danio_rerio
ENSSMAG00000002403	rabl3	100	83.966	ENSDNOG00000008174	RABL3	100	83.966	Dasypus_novemcinctus
ENSSMAG00000002403	rabl3	100	84.388	ENSETEG00000010206	RABL3	100	84.388	Echinops_telfairi
ENSSMAG00000002403	rabl3	100	86.498	ENSECAG00000023059	RABL3	100	86.498	Equus_caballus
ENSSMAG00000002403	rabl3	100	80.591	ENSEEUG00000002897	RABL3	100	80.591	Erinaceus_europaeus
ENSSMAG00000002403	rabl3	100	94.017	ENSELUG00000014758	rabl3	100	94.017	Esox_lucius
ENSSMAG00000002403	rabl3	100	86.076	ENSFCAG00000031879	RABL3	100	82.710	Felis_catus
ENSSMAG00000002403	rabl3	100	83.966	ENSFALG00000005296	RABL3	100	83.966	Ficedula_albicollis
ENSSMAG00000002403	rabl3	100	85.169	ENSFDAG00000000307	RABL3	100	85.169	Fukomys_damarensis
ENSSMAG00000002403	rabl3	100	92.735	ENSFHEG00000011273	rabl3	100	92.735	Fundulus_heteroclitus
ENSSMAG00000002403	rabl3	100	94.872	ENSGMOG00000007845	rabl3	100	94.872	Gadus_morhua
ENSSMAG00000002403	rabl3	100	85.232	ENSGALG00000014949	RABL3	100	85.232	Gallus_gallus
ENSSMAG00000002403	rabl3	100	91.453	ENSGAFG00000015953	rabl3	100	91.453	Gambusia_affinis
ENSSMAG00000002403	rabl3	100	93.590	ENSGACG00000007387	rabl3	100	95.349	Gasterosteus_aculeatus
ENSSMAG00000002403	rabl3	100	86.498	ENSGAGG00000003677	RABL3	100	86.498	Gopherus_agassizii
ENSSMAG00000002403	rabl3	100	84.388	ENSGGOG00000006059	RABL3	100	84.388	Gorilla_gorilla
ENSSMAG00000002403	rabl3	100	97.009	ENSHBUG00000019478	rabl3	93	97.009	Haplochromis_burtoni
ENSSMAG00000002403	rabl3	100	85.169	ENSHGLG00000014491	RABL3	100	85.169	Heterocephalus_glaber_female
ENSSMAG00000002403	rabl3	100	85.169	ENSHGLG00100004866	RABL3	100	85.169	Heterocephalus_glaber_male
ENSSMAG00000002403	rabl3	100	90.995	ENSHCOG00000019245	rabl3	100	90.995	Hippocampus_comes
ENSSMAG00000002403	rabl3	100	91.453	ENSIPUG00000012657	rabl3	100	91.453	Ictalurus_punctatus
ENSSMAG00000002403	rabl3	100	84.388	ENSSTOG00000019452	RABL3	100	84.388	Ictidomys_tridecemlineatus
ENSSMAG00000002403	rabl3	100	82.243	ENSJJAG00000023553	Rabl3	100	82.243	Jaculus_jaculus
ENSSMAG00000002403	rabl3	100	90.598	ENSKMAG00000015464	rabl3	100	90.598	Kryptolebias_marmoratus
ENSSMAG00000002403	rabl3	100	97.436	ENSLBEG00000010627	-	100	97.436	Labrus_bergylta
ENSSMAG00000002403	rabl3	100	97.436	ENSLBEG00000020595	rabl3	100	97.436	Labrus_bergylta
ENSSMAG00000002403	rabl3	100	87.764	ENSLOCG00000006265	rabl3	100	87.764	Lepisosteus_oculatus
ENSSMAG00000002403	rabl3	100	85.654	ENSLAFG00000003711	RABL3	100	85.654	Loxodonta_africana
ENSSMAG00000002403	rabl3	100	84.810	ENSMFAG00000031923	RABL3	100	84.810	Macaca_fascicularis
ENSSMAG00000002403	rabl3	100	81.308	ENSMMUG00000001594	RABL3	100	81.308	Macaca_mulatta
ENSSMAG00000002403	rabl3	100	84.810	ENSMNEG00000043980	RABL3	100	84.810	Macaca_nemestrina
ENSSMAG00000002403	rabl3	100	84.810	ENSMLEG00000028177	RABL3	100	84.810	Mandrillus_leucophaeus
ENSSMAG00000002403	rabl3	100	96.154	ENSMAMG00000015155	rabl3	100	96.154	Mastacembelus_armatus
ENSSMAG00000002403	rabl3	100	96.581	ENSMZEG00005002607	rabl3	100	96.581	Maylandia_zebra
ENSSMAG00000002403	rabl3	100	82.278	ENSMAUG00000013022	Rabl3	100	82.278	Mesocricetus_auratus
ENSSMAG00000002403	rabl3	100	85.654	ENSMICG00000049288	RABL3	100	85.654	Microcebus_murinus
ENSSMAG00000002403	rabl3	100	81.857	ENSMOCG00000015237	Rabl3	100	81.857	Microtus_ochrogaster
ENSSMAG00000002403	rabl3	100	92.373	ENSMMOG00000005628	rabl3	100	92.373	Mola_mola
ENSSMAG00000002403	rabl3	100	85.654	ENSMODG00000018232	RABL3	100	85.654	Monodelphis_domestica
ENSSMAG00000002403	rabl3	100	89.451	ENSMALG00000018837	rabl3	100	89.451	Monopterus_albus
ENSSMAG00000002403	rabl3	100	82.278	MGP_CAROLIEiJ_G0020728	Rabl3	100	90.698	Mus_caroli
ENSSMAG00000002403	rabl3	100	82.278	ENSMUSG00000022827	Rabl3	100	90.698	Mus_musculus
ENSSMAG00000002403	rabl3	100	81.857	MGP_PahariEiJ_G0016429	Rabl3	100	90.698	Mus_pahari
ENSSMAG00000002403	rabl3	100	82.278	MGP_SPRETEiJ_G0021628	Rabl3	100	90.698	Mus_spretus
ENSSMAG00000002403	rabl3	100	86.076	ENSMPUG00000008257	RABL3	89	86.076	Mustela_putorius_furo
ENSSMAG00000002403	rabl3	100	85.232	ENSMLUG00000014113	RABL3	100	85.232	Myotis_lucifugus
ENSSMAG00000002403	rabl3	99	81.250	ENSNGAG00000001939	Rabl3	99	81.250	Nannospalax_galili
ENSSMAG00000002403	rabl3	93	95.872	ENSNBRG00000012423	rabl3	92	95.872	Neolamprologus_brichardi
ENSSMAG00000002403	rabl3	100	84.388	ENSNLEG00000031723	RABL3	100	84.388	Nomascus_leucogenys
ENSSMAG00000002403	rabl3	100	83.966	ENSMEUG00000006606	RABL3	100	83.966	Notamacropus_eugenii
ENSSMAG00000002403	rabl3	100	84.388	ENSODEG00000004758	-	100	84.388	Octodon_degus
ENSSMAG00000002403	rabl3	100	97.009	ENSONIG00000004281	rabl3	100	97.009	Oreochromis_niloticus
ENSSMAG00000002403	rabl3	99	83.830	ENSOANG00000003928	RABL3	99	83.830	Ornithorhynchus_anatinus
ENSSMAG00000002403	rabl3	100	94.017	ENSORLG00000020457	rabl3	100	94.017	Oryzias_latipes
ENSSMAG00000002403	rabl3	100	94.017	ENSORLG00020008991	rabl3	100	89.316	Oryzias_latipes_hni
ENSSMAG00000002403	rabl3	100	94.017	ENSORLG00015005649	rabl3	88	94.017	Oryzias_latipes_hsok
ENSSMAG00000002403	rabl3	100	94.872	ENSOMEG00000015066	rabl3	100	94.872	Oryzias_melastigma
ENSSMAG00000002403	rabl3	100	84.810	ENSOGAG00000005961	RABL3	100	84.810	Otolemur_garnettii
ENSSMAG00000002403	rabl3	100	86.920	ENSOARG00000019939	RABL3	100	86.920	Ovis_aries
ENSSMAG00000002403	rabl3	94	82.960	ENSPPAG00000036997	RABL3	87	82.960	Pan_paniscus
ENSSMAG00000002403	rabl3	100	86.076	ENSPPRG00000016325	RABL3	100	86.076	Panthera_pardus
ENSSMAG00000002403	rabl3	100	86.076	ENSPTIG00000018021	RABL3	100	86.076	Panthera_tigris_altaica
ENSSMAG00000002403	rabl3	100	84.388	ENSPTRG00000015272	RABL3	100	84.388	Pan_troglodytes
ENSSMAG00000002403	rabl3	100	84.810	ENSPANG00000001339	RABL3	100	84.810	Papio_anubis
ENSSMAG00000002403	rabl3	100	92.308	ENSPKIG00000007818	rabl3	100	92.308	Paramormyrops_kingsleyae
ENSSMAG00000002403	rabl3	100	85.654	ENSPSIG00000011358	RABL3	100	85.654	Pelodiscus_sinensis
ENSSMAG00000002403	rabl3	100	89.744	ENSPMGG00000015794	rabl3	100	89.744	Periophthalmus_magnuspinnatus
ENSSMAG00000002403	rabl3	100	82.278	ENSPEMG00000016913	Rabl3	100	82.278	Peromyscus_maniculatus_bairdii
ENSSMAG00000002403	rabl3	100	84.810	ENSPCIG00000018922	RABL3	100	84.810	Phascolarctos_cinereus
ENSSMAG00000002403	rabl3	100	94.017	ENSPFOG00000008586	rabl3	100	94.017	Poecilia_formosa
ENSSMAG00000002403	rabl3	100	94.017	ENSPLAG00000014482	rabl3	100	94.017	Poecilia_latipinna
ENSSMAG00000002403	rabl3	100	94.017	ENSPMEG00000002295	rabl3	100	94.017	Poecilia_mexicana
ENSSMAG00000002403	rabl3	100	94.017	ENSPREG00000014815	rabl3	100	94.017	Poecilia_reticulata
ENSSMAG00000002403	rabl3	100	84.810	ENSPPYG00000013501	RABL3	100	84.810	Pongo_abelii
ENSSMAG00000002403	rabl3	100	86.076	ENSPCOG00000022230	RABL3	100	86.076	Propithecus_coquereli
ENSSMAG00000002403	rabl3	100	84.388	ENSPVAG00000010013	RABL3	100	84.388	Pteropus_vampyrus
ENSSMAG00000002403	rabl3	100	97.009	ENSPNYG00000006659	rabl3	100	97.009	Pundamilia_nyererei
ENSSMAG00000002403	rabl3	100	95.299	ENSPNAG00000000748	rabl3	100	95.299	Pygocentrus_nattereri
ENSSMAG00000002403	rabl3	100	81.857	ENSRNOG00000026085	Rabl3	100	81.857	Rattus_norvegicus
ENSSMAG00000002403	rabl3	100	84.810	ENSRBIG00000040941	RABL3	100	84.810	Rhinopithecus_bieti
ENSSMAG00000002403	rabl3	100	84.810	ENSRROG00000043745	RABL3	100	84.810	Rhinopithecus_roxellana
ENSSMAG00000002403	rabl3	100	86.498	ENSSBOG00000004022	RABL3	100	86.498	Saimiri_boliviensis_boliviensis
ENSSMAG00000002403	rabl3	100	83.966	ENSSHAG00000012233	RABL3	100	83.966	Sarcophilus_harrisii
ENSSMAG00000002403	rabl3	100	93.162	ENSSFOG00015010171	rabl3	100	93.162	Scleropages_formosus
ENSSMAG00000002403	rabl3	100	98.291	ENSSDUG00000012078	rabl3	100	98.291	Seriola_dumerili
ENSSMAG00000002403	rabl3	100	97.863	ENSSLDG00000021899	rabl3	100	97.863	Seriola_lalandi_dorsalis
ENSSMAG00000002403	rabl3	100	85.654	ENSSARG00000008316	RABL3	100	85.654	Sorex_araneus
ENSSMAG00000002403	rabl3	100	85.654	ENSSPUG00000017490	RABL3	100	85.654	Sphenodon_punctatus
ENSSMAG00000002403	rabl3	100	97.009	ENSSPAG00000011642	rabl3	100	97.009	Stegastes_partitus
ENSSMAG00000002403	rabl3	100	86.498	ENSSSCG00000035258	RABL3	100	86.498	Sus_scrofa
ENSSMAG00000002403	rabl3	100	84.388	ENSTGUG00000013374	RABL3	100	84.388	Taeniopygia_guttata
ENSSMAG00000002403	rabl3	85	94.444	ENSTRUG00000007846	RABL3	100	96.094	Takifugu_rubripes
ENSSMAG00000002403	rabl3	100	72.996	ENSTBEG00000005153	RABL3	100	72.996	Tupaia_belangeri
ENSSMAG00000002403	rabl3	100	85.232	ENSUAMG00000005299	RABL3	100	85.232	Ursus_americanus
ENSSMAG00000002403	rabl3	100	85.232	ENSUMAG00000025256	RABL3	89	85.232	Ursus_maritimus
ENSSMAG00000002403	rabl3	100	86.498	ENSVPAG00000003776	RABL3	100	86.498	Vicugna_pacos
ENSSMAG00000002403	rabl3	100	86.076	ENSVVUG00000022300	RABL3	89	86.076	Vulpes_vulpes
ENSSMAG00000002403	rabl3	100	92.735	ENSXMAG00000003244	rabl3	100	92.735	Xiphophorus_maculatus