EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000002487 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 2113 bases
Position: chr6:2720505-2722617
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000004033	MMR_HSR1	PF01926.23	4.3e-05	1	1
ENSSMAP00000004021	MMR_HSR1	PF01926.23	8.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000004085	-	982	-	ENSSMAP00000004021	210 (aa)	-	-
ENSSMAT00000004095	-	1354	-	ENSSMAP00000004033	168 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000002487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000002487's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000002487	-	79	34.328	ENSSMAG00000016740	arl8ba	71	33.835
ENSSMAG00000002487	-	79	35.075	ENSSMAG00000015130	arl8bb	71	34.586
ENSSMAG00000002487	-	96	40.670	ENSSMAG00000016399	arl4cb	93	40.670
ENSSMAG00000002487	-	92	34.848	ENSSMAG00000021333	ARL6	90	34.848
ENSSMAG00000002487	-	96	40.952	ENSSMAG00000013072	-	92	40.952
ENSSMAG00000002487	-	98	40.654	ENSSMAG00000014218	-	89	40.654
ENSSMAG00000002487	-	99	56.731	ENSSMAG00000018796	-	98	56.731
ENSSMAG00000002487	-	84	36.184	ENSSMAG00000001351	arfrp1	65	36.667
ENSSMAG00000002487	-	87	44.086	ENSSMAG00000012843	-	75	44.086
ENSSMAG00000002487	-	99	35.238	ENSSMAG00000010552	arl5c	99	35.238
ENSSMAG00000002487	-	92	41.000	ENSSMAG00000008394	arl4d	85	41.000
ENSSMAG00000002487	-	100	39.908	ENSSMAG00000017183	-	94	39.908
ENSSMAG00000002487	-	99	58.173	ENSSMAG00000001861	arf3b	98	58.173
ENSSMAG00000002487	-	75	61.905	ENSSMAG00000006815	ARF6	84	62.400
ENSSMAG00000002487	-	77	32.374	ENSSMAG00000017528	rab1ab	66	32.609
ENSSMAG00000002487	-	100	59.716	ENSSMAG00000011361	arf5	100	59.716
ENSSMAG00000002487	-	90	37.696	ENSSMAG00000005803	arl3	88	37.696
ENSSMAG00000002487	-	98	38.647	ENSSMAG00000011578	arl8	98	38.647
ENSSMAG00000002487	-	79	34.328	ENSSMAG00000015087	arl8a	71	33.835
ENSSMAG00000002487	-	99	58.173	ENSSMAG00000006125	-	98	58.173
ENSSMAG00000002487	-	99	59.135	ENSSMAG00000010770	arf2b	98	59.135
ENSSMAG00000002487	-	71	33.333	ENSSMAG00000021049	-	60	33.594
ENSSMAG00000002487	-	86	46.622	ENSSMAG00000000005	arl11	91	39.153
ENSSMAG00000002487	-	100	42.654	ENSSMAG00000016416	arl1	99	42.654
ENSSMAG00000002487	-	99	36.538	ENSSMAG00000006539	arl5a	100	36.493
ENSSMAG00000002487	-	100	39.819	ENSSMAG00000015059	arl4aa	95	39.819
ENSSMAG00000002487	-	92	33.953	ENSSMAG00000007588	-	91	33.953
ENSSMAG00000002487	-	99	57.692	ENSSMAG00000004541	-	98	57.692
ENSSMAG00000002487	-	92	37.436	ENSSMAG00000017643	arl2	89	37.436
ENSSMAG00000002487	-	74	36.800	ENSSMAG00000002165	-	63	37.097
ENSSMAG00000002487	-	99	58.173	ENSSMAG00000002927	-	98	58.173
ENSSMAG00000002487	-	71	33.333	ENSSMAG00000009201	rab1ba	61	33.594
ENSSMAG00000002487	-	68	31.092	ENSSMAG00000002569	-	64	31.092
ENSSMAG00000002487	-	95	36.816	ENSSMAG00000003002	arl3l2	86	36.816

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000002487	-	99	73.558	ENSAPEG00000002838	-	99	73.558	Amphiprion_percula
ENSSMAG00000002487	-	82	83.212	ENSATEG00000003808	-	99	64.904	Anabas_testudineus
ENSSMAG00000002487	-	99	74.519	ENSATEG00000003847	-	99	74.519	Anabas_testudineus
ENSSMAG00000002487	-	96	71.144	ENSACLG00000009822	-	91	71.144	Astatotilapia_calliptera
ENSSMAG00000002487	-	81	80.147	ENSCVAG00000013902	-	80	82.171	Cyprinodon_variegatus
ENSSMAG00000002487	-	79	87.970	ENSFHEG00000019659	-	88	73.656	Fundulus_heteroclitus
ENSSMAG00000002487	-	53	89.888	ENSGAFG00000002801	-	78	89.773	Gambusia_affinis
ENSSMAG00000002487	-	99	76.667	ENSGACG00000003831	-	99	76.667	Gasterosteus_aculeatus
ENSSMAG00000002487	-	100	69.048	ENSHBUG00000001250	-	100	69.048	Haplochromis_burtoni
ENSSMAG00000002487	-	99	74.879	ENSLBEG00000027205	-	99	74.879	Labrus_bergylta
ENSSMAG00000002487	-	99	73.077	ENSMAMG00000013955	-	99	73.077	Mastacembelus_armatus
ENSSMAG00000002487	-	100	70.952	ENSMZEG00005016274	-	100	70.952	Maylandia_zebra
ENSSMAG00000002487	-	100	70.952	ENSMZEG00005016277	-	100	70.952	Maylandia_zebra
ENSSMAG00000002487	-	100	70.000	ENSMMOG00000013651	-	98	70.673	Mola_mola
ENSSMAG00000002487	-	100	69.524	ENSONIG00000004340	-	100	69.524	Oreochromis_niloticus
ENSSMAG00000002487	-	100	74.286	ENSPLAG00000015887	-	100	74.286	Poecilia_latipinna
ENSSMAG00000002487	-	100	74.286	ENSPMEG00000007064	-	100	74.286	Poecilia_mexicana
ENSSMAG00000002487	-	96	74.752	ENSPREG00000000912	-	100	74.752	Poecilia_reticulata
ENSSMAG00000002487	-	99	75.481	ENSSDUG00000020599	-	99	75.481	Seriola_dumerili
ENSSMAG00000002487	-	99	75.481	ENSSLDG00000020097	-	99	75.481	Seriola_lalandi_dorsalis
ENSSMAG00000002487	-	99	73.558	ENSSPAG00000017484	-	99	73.558	Stegastes_partitus
ENSSMAG00000002487	-	79	76.692	ENSTRUG00000025171	-	98	63.158	Takifugu_rubripes
ENSSMAG00000002487	-	77	77.519	ENSTNIG00000000796	-	78	59.135	Tetraodon_nigroviridis
ENSSMAG00000002487	-	76	78.740	ENSTNIG00000001632	-	78	59.135	Tetraodon_nigroviridis
ENSSMAG00000002487	-	76	75.781	ENSTNIG00000018302	-	78	58.173	Tetraodon_nigroviridis
ENSSMAG00000002487	-	53	83.146	ENSTNIG00000005043	-	99	62.238	Tetraodon_nigroviridis
ENSSMAG00000002487	-	100	74.762	ENSXMAG00000029601	-	100	74.762	Xiphophorus_maculatus