EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000002520 (Gene tree)
Gene ID: -
Gene Symbol: rbm25b
Alias: fi03e10|rbm25|si:ch211-105d18.5|wu:fi03e10|zgc:56208
Full Name: RNA binding motif protein 25b
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 13863 bases
Position: chr20:16163544-16177406
Accession: ZDB-GENE-030131-5547
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000004100	RRM_1	PF00076.22	3.4e-09	1	1
ENSSMAP00000004100	PWI	PF01480.17	2.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000004164	-	7593	-	ENSSMAP00000004100	812 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000002520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000002520's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000002520	rbm25b	57	75.745	ENSSMAG00000009745	rbm25a	59	72.990

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000002520	rbm25b	57	76.078	ENSAPOG00000017757	rbm25a	58	74.375	Acanthochromis_polyacanthus
ENSSMAG00000002520	rbm25b	58	84.222	ENSAPOG00000015321	rbm25b	59	87.631	Acanthochromis_polyacanthus
ENSSMAG00000002520	rbm25b	58	83.156	ENSACIG00000014178	rbm25b	57	82.180	Amphilophus_citrinellus
ENSSMAG00000002520	rbm25b	58	84.778	ENSAOCG00000019308	rbm25b	58	83.891	Amphiprion_ocellaris
ENSSMAG00000002520	rbm25b	57	74.353	ENSAOCG00000013695	rbm25a	57	72.050	Amphiprion_ocellaris
ENSSMAG00000002520	rbm25b	59	87.866	ENSAPEG00000009666	rbm25b	61	87.866	Amphiprion_percula
ENSSMAG00000002520	rbm25b	57	75.536	ENSAPEG00000007514	rbm25a	58	74.174	Amphiprion_percula
ENSSMAG00000002520	rbm25b	58	75.000	ENSATEG00000020676	rbm25a	59	73.211	Anabas_testudineus
ENSSMAG00000002520	rbm25b	58	86.316	ENSATEG00000017312	rbm25b	100	87.255	Anabas_testudineus
ENSSMAG00000002520	rbm25b	55	64.955	ENSAPLG00000006643	RBM25	56	69.278	Anas_platyrhynchos
ENSSMAG00000002520	rbm25b	55	61.915	ENSANAG00000028295	RBM25	98	64.360	Aotus_nancymaae
ENSSMAG00000002520	rbm25b	58	88.110	ENSACLG00000024359	rbm25b	58	87.891	Astatotilapia_calliptera
ENSSMAG00000002520	rbm25b	90	71.984	ENSACLG00000027482	rbm25a	91	68.000	Astatotilapia_calliptera
ENSSMAG00000002520	rbm25b	57	69.807	ENSAMXG00000024525	rbm25b	61	66.468	Astyanax_mexicanus
ENSSMAG00000002520	rbm25b	66	55.952	WBGene00012245	W04D2.6	71	40.107	Caenorhabditis_elegans
ENSSMAG00000002520	rbm25b	63	85.135	ENSCHOG00000008903	RBM25	63	84.507	Choloepus_hoffmanni
ENSSMAG00000002520	rbm25b	98	60.909	ENSCGRG00001020817	Rbm25	66	61.552	Cricetulus_griseus_chok1gshd
ENSSMAG00000002520	rbm25b	62	89.300	ENSCSEG00000020737	rbm25b	59	82.008	Cynoglossus_semilaevis
ENSSMAG00000002520	rbm25b	58	72.458	ENSCSEG00000009430	rbm25a	60	69.919	Cynoglossus_semilaevis
ENSSMAG00000002520	rbm25b	58	67.505	ENSCVAG00000005498	rbm25a	99	67.839	Cyprinodon_variegatus
ENSSMAG00000002520	rbm25b	100	83.721	ENSCVAG00000003478	rbm25b	100	82.598	Cyprinodon_variegatus
ENSSMAG00000002520	rbm25b	54	63.801	ENSDARG00000039266	rbm25a	99	92.405	Danio_rerio
ENSSMAG00000002520	rbm25b	58	75.000	ENSELUG00000007730	rbm25b	100	75.180	Esox_lucius
ENSSMAG00000002520	rbm25b	59	65.833	ENSFHEG00000005318	rbm25a	57	63.618	Fundulus_heteroclitus
ENSSMAG00000002520	rbm25b	58	84.810	ENSFHEG00000003513	rbm25b	59	84.342	Fundulus_heteroclitus
ENSSMAG00000002520	rbm25b	84	78.222	ENSGMOG00000014097	rbm25b	54	78.222	Gadus_morhua
ENSSMAG00000002520	rbm25b	73	86.087	ENSGMOG00000014070	rbm25a	80	79.435	Gadus_morhua
ENSSMAG00000002520	rbm25b	100	69.222	ENSGAFG00000018036	rbm25a	57	69.168	Gambusia_affinis
ENSSMAG00000002520	rbm25b	98	83.251	ENSGAFG00000001092	rbm25b	100	77.551	Gambusia_affinis
ENSSMAG00000002520	rbm25b	57	74.784	ENSHBUG00000016908	rbm25a	58	69.959	Haplochromis_burtoni
ENSSMAG00000002520	rbm25b	58	88.110	ENSHBUG00000018499	rbm25b	58	87.891	Haplochromis_burtoni
ENSSMAG00000002520	rbm25b	100	76.087	ENSHCOG00000000142	rbm25b	58	74.946	Hippocampus_comes
ENSSMAG00000002520	rbm25b	100	88.127	ENSLBEG00000010667	rbm25b	59	87.292	Labrus_bergylta
ENSSMAG00000002520	rbm25b	58	66.940	ENSLOCG00000014196	rbm25b	56	70.143	Lepisosteus_oculatus
ENSSMAG00000002520	rbm25b	58	86.469	ENSMAMG00000004524	rbm25b	100	87.975	Mastacembelus_armatus
ENSSMAG00000002520	rbm25b	53	72.311	ENSMAMG00000000165	rbm25a	62	65.294	Mastacembelus_armatus
ENSSMAG00000002520	rbm25b	58	88.110	ENSMZEG00005001453	rbm25b	58	87.891	Maylandia_zebra
ENSSMAG00000002520	rbm25b	57	74.784	ENSMZEG00005011183	rbm25a	61	68.000	Maylandia_zebra
ENSSMAG00000002520	rbm25b	55	61.693	ENSMICG00000034082	RBM25	98	64.360	Microcebus_murinus
ENSSMAG00000002520	rbm25b	100	88.337	ENSMMOG00000015545	rbm25b	64	87.421	Mola_mola
ENSSMAG00000002520	rbm25b	58	73.319	ENSMMOG00000009065	rbm25a	57	72.257	Mola_mola
ENSSMAG00000002520	rbm25b	59	85.863	ENSMALG00000020441	rbm25b	91	85.863	Monopterus_albus
ENSSMAG00000002520	rbm25b	55	61.915	MGP_CAROLIEiJ_G0017921	Rbm25	94	70.109	Mus_caroli
ENSSMAG00000002520	rbm25b	55	61.915	ENSMUSG00000010608	Rbm25	94	70.109	Mus_musculus
ENSSMAG00000002520	rbm25b	55	61.915	MGP_PahariEiJ_G0029677	Rbm25	94	70.109	Mus_pahari
ENSSMAG00000002520	rbm25b	55	62.361	MGP_SPRETEiJ_G0018766	-	94	70.109	Mus_spretus
ENSSMAG00000002520	rbm25b	57	74.784	ENSNBRG00000003761	rbm25a	58	72.141	Neolamprologus_brichardi
ENSSMAG00000002520	rbm25b	58	80.467	ENSNBRG00000022192	rbm25b	57	78.288	Neolamprologus_brichardi
ENSSMAG00000002520	rbm25b	55	61.247	ENSNLEG00000002701	RBM25	98	64.706	Nomascus_leucogenys
ENSSMAG00000002520	rbm25b	58	83.263	ENSORLG00000011874	rbm25b	59	81.612	Oryzias_latipes
ENSSMAG00000002520	rbm25b	58	83.475	ENSORLG00020016422	rbm25b	59	81.818	Oryzias_latipes_hni
ENSSMAG00000002520	rbm25b	58	83.475	ENSORLG00015011269	rbm25b	59	81.818	Oryzias_latipes_hsok
ENSSMAG00000002520	rbm25b	58	84.958	ENSOMEG00000023172	rbm25b	58	83.750	Oryzias_melastigma
ENSSMAG00000002520	rbm25b	58	75.783	ENSPKIG00000003203	rbm25b	58	75.413	Paramormyrops_kingsleyae
ENSSMAG00000002520	rbm25b	59	83.299	ENSPMGG00000015740	rbm25b	59	82.083	Periophthalmus_magnuspinnatus
ENSSMAG00000002520	rbm25b	53	63.825	ENSPMGG00000001791	rbm25a	100	63.758	Periophthalmus_magnuspinnatus
ENSSMAG00000002520	rbm25b	100	70.983	ENSPLAG00000018338	rbm25a	59	68.390	Poecilia_latipinna
ENSSMAG00000002520	rbm25b	100	70.419	ENSPMEG00000024470	rbm25a	57	69.371	Poecilia_mexicana
ENSSMAG00000002520	rbm25b	59	66.667	ENSPMEG00000019161	rbm25b	100	84.764	Poecilia_mexicana
ENSSMAG00000002520	rbm25b	58	80.679	ENSPNYG00000023303	rbm25b	57	78.497	Pundamilia_nyererei
ENSSMAG00000002520	rbm25b	58	71.984	ENSPNYG00000022596	rbm25a	58	68.000	Pundamilia_nyererei
ENSSMAG00000002520	rbm25b	58	73.306	ENSPNAG00000012024	rbm25b	58	73.292	Pygocentrus_nattereri
ENSSMAG00000002520	rbm25b	58	75.000	ENSSFOG00015007093	rbm25	58	73.333	Scleropages_formosus
ENSSMAG00000002520	rbm25b	57	76.068	ENSSDUG00000017984	rbm25a	59	74.433	Seriola_dumerili
ENSSMAG00000002520	rbm25b	100	85.993	ENSSLDG00000024573	rbm25b	99	89.565	Seriola_lalandi_dorsalis
ENSSMAG00000002520	rbm25b	57	76.068	ENSSLDG00000010342	rbm25a	58	74.433	Seriola_lalandi_dorsalis
ENSSMAG00000002520	rbm25b	100	88.221	ENSSPAG00000016168	rbm25b	100	88.221	Stegastes_partitus
ENSSMAG00000002520	rbm25b	57	74.737	ENSSPAG00000011114	rbm25a	58	73.673	Stegastes_partitus
ENSSMAG00000002520	rbm25b	58	85.201	ENSTRUG00000017964	rbm25b	59	84.583	Takifugu_rubripes
ENSSMAG00000002520	rbm25b	60	70.303	ENSTRUG00000003076	rbm25a	64	66.471	Takifugu_rubripes
ENSSMAG00000002520	rbm25b	56	77.165	ENSTBEG00000010538	-	55	77.600	Tupaia_belangeri
ENSSMAG00000002520	rbm25b	81	77.083	ENSVPAG00000009052	RBM25	84	65.957	Vicugna_pacos
ENSSMAG00000002520	rbm25b	100	75.152	ENSXCOG00000002222	rbm25b	100	77.576	Xiphophorus_couchianus
ENSSMAG00000002520	rbm25b	100	70.000	ENSXCOG00000004043	RBM25	60	67.251	Xiphophorus_couchianus
ENSSMAG00000002520	rbm25b	100	83.855	ENSXMAG00000017290	rbm25b	100	84.578	Xiphophorus_maculatus
ENSSMAG00000002520	rbm25b	100	67.292	ENSXMAG00000009077	RBM25	57	64.188	Xiphophorus_maculatus