EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000002529 (Gene tree)
Gene ID: -
Gene Symbol: tbrg1
Alias: zgc:171428
Full Name: transforming growth factor beta regulator 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 12892 bases
Position: chr3:21068123-21081014
Accession: ZDB-GENE-080220-62
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000004138	HARE-HTH	PF05066.13	2e-15	1	1
ENSSMAP00000004102	HARE-HTH	PF05066.13	2.1e-15	1	1
ENSSMAP00000004170	HARE-HTH	PF05066.13	2.1e-15	1	1
ENSSMAP00000004215	HARE-HTH	PF05066.13	2.1e-15	1	1
ENSSMAP00000004079	HARE-HTH	PF05066.13	2.3e-15	1	1
ENSSMAP00000004096	HARE-HTH	PF05066.13	2.4e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000004234	-	5707	-	ENSSMAP00000004170	541 (aa)	-	A0A2U9B6H8
ENSSMAT00000004280	-	4498	-	ENSSMAP00000004215	541 (aa)	-	A0A2U9B6H8
ENSSMAT00000004312	-	5795	-	ENSSMAP00000004247	471 (aa)	-	-
ENSSMAT00000004143	-	5400	-	ENSSMAP00000004079	565 (aa)	-	-
ENSSMAT00000004166	-	3596	-	ENSSMAP00000004102	541 (aa)	-	A0A2U9B6H8
ENSSMAT00000004160	-	1710	-	ENSSMAP00000004096	569 (aa)	-	-
ENSSMAT00000004202	-	2020	-	ENSSMAP00000004138	521 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000002529's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000002529's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000002529	tbrg1	100	88.278	ENSAPOG00000017352	tbrg1	100	88.278	Acanthochromis_polyacanthus
ENSSMAG00000002529	tbrg1	96	83.762	ENSACIG00000021274	tbrg1	94	83.762	Amphilophus_citrinellus
ENSSMAG00000002529	tbrg1	100	87.912	ENSAOCG00000018605	tbrg1	100	87.912	Amphiprion_ocellaris
ENSSMAG00000002529	tbrg1	100	87.912	ENSAPEG00000022443	tbrg1	100	87.912	Amphiprion_percula
ENSSMAG00000002529	tbrg1	100	89.927	ENSATEG00000023537	tbrg1	100	89.927	Anabas_testudineus
ENSSMAG00000002529	tbrg1	100	86.447	ENSACLG00000000281	tbrg1	100	86.447	Astatotilapia_calliptera
ENSSMAG00000002529	tbrg1	100	72.467	ENSAMXG00000008381	tbrg1	99	70.545	Astyanax_mexicanus
ENSSMAG00000002529	tbrg1	100	85.558	ENSCSEG00000002445	tbrg1	100	85.558	Cynoglossus_semilaevis
ENSSMAG00000002529	tbrg1	100	78.571	ENSCVAG00000019626	tbrg1	100	79.670	Cyprinodon_variegatus
ENSSMAG00000002529	tbrg1	100	71.073	ENSDARG00000074996	tbrg1	97	70.433	Danio_rerio
ENSSMAG00000002529	tbrg1	95	46.796	ENSEBUG00000014060	tbrg1	89	49.789	Eptatretus_burgeri
ENSSMAG00000002529	tbrg1	98	78.101	ENSELUG00000017458	tbrg1	99	76.727	Esox_lucius
ENSSMAG00000002529	tbrg1	91	75.510	ENSFHEG00000004283	tbrg1	92	77.197	Fundulus_heteroclitus
ENSSMAG00000002529	tbrg1	100	80.403	ENSGAFG00000000204	tbrg1	100	80.403	Gambusia_affinis
ENSSMAG00000002529	tbrg1	100	86.447	ENSHBUG00000004935	tbrg1	100	86.447	Haplochromis_burtoni
ENSSMAG00000002529	tbrg1	99	78.707	ENSHCOG00000010588	tbrg1	100	76.673	Hippocampus_comes
ENSSMAG00000002529	tbrg1	100	70.363	ENSIPUG00000008697	tbrg1	98	69.669	Ictalurus_punctatus
ENSSMAG00000002529	tbrg1	100	83.150	ENSKMAG00000002775	tbrg1	100	83.150	Kryptolebias_marmoratus
ENSSMAG00000002529	tbrg1	98	86.822	ENSLBEG00000017559	tbrg1	95	86.275	Labrus_bergylta
ENSSMAG00000002529	tbrg1	97	74.219	ENSLOCG00000003093	tbrg1	99	71.688	Lepisosteus_oculatus
ENSSMAG00000002529	tbrg1	100	87.912	ENSMAMG00000000876	tbrg1	100	87.912	Mastacembelus_armatus
ENSSMAG00000002529	tbrg1	100	86.264	ENSMZEG00005013545	tbrg1	93	86.131	Maylandia_zebra
ENSSMAG00000002529	tbrg1	96	81.262	ENSMMOG00000005314	tbrg1	92	81.262	Mola_mola
ENSSMAG00000002529	tbrg1	97	86.914	ENSMALG00000011630	tbrg1	99	86.914	Monopterus_albus
ENSSMAG00000002529	tbrg1	98	85.448	ENSNBRG00000017490	tbrg1	100	85.448	Neolamprologus_brichardi
ENSSMAG00000002529	tbrg1	100	86.630	ENSONIG00000005284	tbrg1	100	86.630	Oreochromis_niloticus
ENSSMAG00000002529	tbrg1	100	81.136	ENSORLG00000014519	tbrg1	100	80.220	Oryzias_latipes
ENSSMAG00000002529	tbrg1	100	80.403	ENSORLG00020009567	tbrg1	100	79.487	Oryzias_latipes_hni
ENSSMAG00000002529	tbrg1	100	80.586	ENSORLG00015000448	tbrg1	100	79.670	Oryzias_latipes_hsok
ENSSMAG00000002529	tbrg1	100	81.685	ENSOMEG00000006130	tbrg1	100	81.319	Oryzias_melastigma
ENSSMAG00000002529	tbrg1	98	72.481	ENSPKIG00000012274	tbrg1	91	72.159	Paramormyrops_kingsleyae
ENSSMAG00000002529	tbrg1	100	76.642	ENSPMGG00000015968	tbrg1	100	76.460	Periophthalmus_magnuspinnatus
ENSSMAG00000002529	tbrg1	100	80.586	ENSPFOG00000004279	tbrg1	100	80.586	Poecilia_formosa
ENSSMAG00000002529	tbrg1	100	80.586	ENSPLAG00000001227	tbrg1	100	80.586	Poecilia_latipinna
ENSSMAG00000002529	tbrg1	100	80.586	ENSPMEG00000000955	tbrg1	100	80.586	Poecilia_mexicana
ENSSMAG00000002529	tbrg1	100	80.586	ENSPREG00000005246	tbrg1	100	80.586	Poecilia_reticulata
ENSSMAG00000002529	tbrg1	87	85.983	ENSPNYG00000012625	tbrg1	100	85.983	Pundamilia_nyererei
ENSSMAG00000002529	tbrg1	100	72.190	ENSPNAG00000028332	tbrg1	99	71.657	Pygocentrus_nattereri
ENSSMAG00000002529	tbrg1	96	74.409	ENSSFOG00015009308	tbrg1	99	68.081	Scleropages_formosus
ENSSMAG00000002529	tbrg1	99	91.376	ENSSDUG00000013674	tbrg1	99	91.376	Seriola_dumerili
ENSSMAG00000002529	tbrg1	97	90.058	ENSSLDG00000008932	tbrg1	98	90.253	Seriola_lalandi_dorsalis
ENSSMAG00000002529	tbrg1	89	87.607	ENSSPAG00000004808	tbrg1	99	86.538	Stegastes_partitus
ENSSMAG00000002529	tbrg1	98	78.764	ENSTRUG00000005960	tbrg1	98	79.151	Takifugu_rubripes
ENSSMAG00000002529	tbrg1	100	80.037	ENSXMAG00000001551	tbrg1	100	80.037	Xiphophorus_maculatus