EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000002552 (Gene tree)
Gene ID: -
Gene Symbol: dkc1
Alias: fc87a02|fi24a05|fv62a07|wu:fa28f10|wu:fc87a02|wu:fi24a05|wu:fv62a07|zgc:110395
Full Name: dyskeratosis congenita 1%2C dyskerin
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 8508 bases
Position: chr17:543675-552182
Accession: ZDB-GENE-031118-120
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000004174	TruB_N	PF01509.18	7.4e-22	1	1
ENSSMAP00000004152	TruB_N	PF01509.18	3.9e-20	1	1
ENSSMAP00000004152	PUA	PF01472.20	2.7e-16	1	1
ENSSMAP00000004174	PUA	PF01472.20	3.1e-16	1	1
ENSSMAP00000004174	DKCLD	PF08068.12	4.1e-31	1	1
ENSSMAP00000004152	DKCLD	PF08068.12	4.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000004216	-	5603	-	ENSSMAP00000004152	511 (aa)	-	A0A2U9CI85
ENSSMAT00000004238	-	1488	-	ENSSMAP00000004174	495 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000002552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000002552's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000002552	dkc1	95	75.502	ENSG00000130826	DKC1	99	87.805	Homo_sapiens
ENSSMAG00000002552	dkc1	85	88.710	ENSAPOG00000007799	dkc1	89	86.842	Acanthochromis_polyacanthus
ENSSMAG00000002552	dkc1	82	85.749	ENSAMEG00000002776	DKC1	79	87.032	Ailuropoda_melanoleuca
ENSSMAG00000002552	dkc1	83	92.439	ENSACIG00000022614	dkc1	85	92.439	Amphilophus_citrinellus
ENSSMAG00000002552	dkc1	96	83.707	ENSAOCG00000013159	dkc1	87	88.479	Amphiprion_ocellaris
ENSSMAG00000002552	dkc1	92	84.567	ENSAPEG00000002284	dkc1	89	87.061	Amphiprion_percula
ENSSMAG00000002552	dkc1	85	87.016	ENSATEG00000013682	dkc1	88	86.475	Anabas_testudineus
ENSSMAG00000002552	dkc1	88	79.741	ENSACAG00000015600	DKC1	79	79.310	Anolis_carolinensis
ENSSMAG00000002552	dkc1	90	78.105	ENSANAG00000022732	DKC1	87	78.747	Aotus_nancymaae
ENSSMAG00000002552	dkc1	90	83.983	ENSACLG00000015605	dkc1	90	85.235	Astatotilapia_calliptera
ENSSMAG00000002552	dkc1	88	86.784	ENSAMXG00000017108	dkc1	88	87.220	Astyanax_mexicanus
ENSSMAG00000002552	dkc1	88	81.465	ENSBTAG00000013045	DKC1	87	81.321	Bos_taurus
ENSSMAG00000002552	dkc1	79	66.581	WBGene00010478	K01G5.5	97	62.125	Caenorhabditis_elegans
ENSSMAG00000002552	dkc1	95	75.752	ENSCJAG00000004210	DKC1	95	74.704	Callithrix_jacchus
ENSSMAG00000002552	dkc1	86	74.126	ENSCAFG00000009311	-	87	70.880	Canis_familiaris
ENSSMAG00000002552	dkc1	88	80.227	ENSCAFG00000019620	-	87	79.065	Canis_familiaris
ENSSMAG00000002552	dkc1	87	71.795	ENSCAFG00020009379	-	75	77.273	Canis_lupus_dingo
ENSSMAG00000002552	dkc1	88	80.227	ENSCAFG00020008918	-	87	79.065	Canis_lupus_dingo
ENSSMAG00000002552	dkc1	88	81.922	ENSCHIG00000017392	DKC1	87	81.549	Capra_hircus
ENSSMAG00000002552	dkc1	88	81.038	ENSTSYG00000007681	DKC1	78	85.819	Carlito_syrichta
ENSSMAG00000002552	dkc1	77	85.340	ENSCAPG00000003342	DKC1	92	81.436	Cavia_aperea
ENSSMAG00000002552	dkc1	86	82.394	ENSCPOG00000008825	DKC1	86	81.448	Cavia_porcellus
ENSSMAG00000002552	dkc1	88	71.330	ENSCCAG00000027418	DKC1	84	71.558	Cebus_capucinus
ENSSMAG00000002552	dkc1	95	75.100	ENSCATG00000033602	DKC1	95	74.704	Cercocebus_atys
ENSSMAG00000002552	dkc1	82	85.749	ENSCLAG00000000720	DKC1	87	81.406	Chinchilla_lanigera
ENSSMAG00000002552	dkc1	95	75.703	ENSCSAG00000006706	DKC1	95	74.704	Chlorocebus_sabaeus
ENSSMAG00000002552	dkc1	79	87.724	ENSCPBG00000005858	DKC1	89	83.614	Chrysemys_picta_bellii
ENSSMAG00000002552	dkc1	85	75.650	ENSCING00000004599	-	82	74.943	Ciona_intestinalis
ENSSMAG00000002552	dkc1	79	79.231	ENSCSAVG00000010047	-	91	75.912	Ciona_savignyi
ENSSMAG00000002552	dkc1	95	75.703	ENSCANG00000027987	DKC1	95	74.704	Colobus_angolensis_palliatus
ENSSMAG00000002552	dkc1	88	80.963	ENSCGRG00001014574	-	86	80.761	Cricetulus_griseus_chok1gshd
ENSSMAG00000002552	dkc1	75	67.717	ENSCGRG00001016789	-	79	68.108	Cricetulus_griseus_chok1gshd
ENSSMAG00000002552	dkc1	88	80.963	ENSCGRG00000016075	-	86	80.761	Cricetulus_griseus_crigri
ENSSMAG00000002552	dkc1	75	67.717	ENSCGRG00000014809	-	77	68.108	Cricetulus_griseus_crigri
ENSSMAG00000002552	dkc1	92	86.325	ENSCSEG00000012633	dkc1	90	89.535	Cynoglossus_semilaevis
ENSSMAG00000002552	dkc1	86	89.066	ENSCVAG00000010155	dkc1	87	88.864	Cyprinodon_variegatus
ENSSMAG00000002552	dkc1	85	89.838	ENSDARG00000016484	dkc1	87	89.165	Danio_rerio
ENSSMAG00000002552	dkc1	88	81.236	ENSDNOG00000004218	DKC1	87	80.313	Dasypus_novemcinctus
ENSSMAG00000002552	dkc1	55	74.632	ENSDORG00000013566	-	92	74.194	Dipodomys_ordii
ENSSMAG00000002552	dkc1	88	68.119	FBgn0259937	Nop60B	88	68.500	Drosophila_melanogaster
ENSSMAG00000002552	dkc1	79	86.957	ENSETEG00000016095	DKC1	81	86.181	Echinops_telfairi
ENSSMAG00000002552	dkc1	64	80.063	ENSEBUG00000015962	dkc1	98	81.443	Eptatretus_burgeri
ENSSMAG00000002552	dkc1	88	80.455	ENSEASG00005007484	DKC1	77	86.783	Equus_asinus_asinus
ENSSMAG00000002552	dkc1	88	80.455	ENSECAG00000023524	DKC1	77	86.783	Equus_caballus
ENSSMAG00000002552	dkc1	85	81.324	ENSEEUG00000003323	DKC1	99	83.019	Erinaceus_europaeus
ENSSMAG00000002552	dkc1	84	91.367	ENSELUG00000014538	dkc1	84	91.367	Esox_lucius
ENSSMAG00000002552	dkc1	79	87.980	ENSFCAG00000006577	DKC1	79	86.783	Felis_catus
ENSSMAG00000002552	dkc1	88	81.591	ENSFALG00000011496	DKC1	85	81.166	Ficedula_albicollis
ENSSMAG00000002552	dkc1	88	80.320	ENSFDAG00000002516	DKC1	87	82.028	Fukomys_damarensis
ENSSMAG00000002552	dkc1	88	87.500	ENSFHEG00000004627	dkc1	89	87.500	Fundulus_heteroclitus
ENSSMAG00000002552	dkc1	79	89.003	ENSGMOG00000017277	dkc1	100	89.003	Gadus_morhua
ENSSMAG00000002552	dkc1	87	82.176	ENSGALG00000005054	DKC1	86	81.264	Gallus_gallus
ENSSMAG00000002552	dkc1	89	87.004	ENSGAFG00000011486	dkc1	77	87.004	Gambusia_affinis
ENSSMAG00000002552	dkc1	79	95.652	ENSGACG00000004373	dkc1	96	94.975	Gasterosteus_aculeatus
ENSSMAG00000002552	dkc1	85	81.321	ENSGAGG00000011330	DKC1	84	82.299	Gopherus_agassizii
ENSSMAG00000002552	dkc1	95	75.502	ENSGGOG00000001045	DKC1	95	75.099	Gorilla_gorilla
ENSSMAG00000002552	dkc1	93	86.709	ENSHBUG00000012436	dkc1	89	88.419	Haplochromis_burtoni
ENSSMAG00000002552	dkc1	85	82.423	ENSHGLG00000000649	DKC1	78	86.284	Heterocephalus_glaber_female
ENSSMAG00000002552	dkc1	85	82.423	ENSHGLG00100001153	DKC1	80	84.767	Heterocephalus_glaber_male
ENSSMAG00000002552	dkc1	94	82.305	ENSHCOG00000021099	dkc1	89	86.093	Hippocampus_comes
ENSSMAG00000002552	dkc1	85	86.818	ENSIPUG00000010309	dkc1	85	86.878	Ictalurus_punctatus
ENSSMAG00000002552	dkc1	88	81.465	ENSSTOG00000001074	-	91	80.813	Ictidomys_tridecemlineatus
ENSSMAG00000002552	dkc1	88	73.913	ENSSTOG00000020149	-	85	75.231	Ictidomys_tridecemlineatus
ENSSMAG00000002552	dkc1	88	69.476	ENSSTOG00000011904	-	83	67.706	Ictidomys_tridecemlineatus
ENSSMAG00000002552	dkc1	55	75.000	ENSJJAG00000010086	-	92	74.729	Jaculus_jaculus
ENSSMAG00000002552	dkc1	87	86.099	ENSKMAG00000008010	dkc1	90	86.099	Kryptolebias_marmoratus
ENSSMAG00000002552	dkc1	84	90.421	ENSLBEG00000019122	dkc1	92	89.087	Labrus_bergylta
ENSSMAG00000002552	dkc1	89	79.521	ENSLACG00000014025	DKC1	91	87.186	Latimeria_chalumnae
ENSSMAG00000002552	dkc1	86	84.807	ENSLOCG00000013713	dkc1	89	86.417	Lepisosteus_oculatus
ENSSMAG00000002552	dkc1	88	80.275	ENSLAFG00000000221	DKC1	86	80.405	Loxodonta_africana
ENSSMAG00000002552	dkc1	95	75.502	ENSMFAG00000032398	DKC1	82	74.901	Macaca_fascicularis
ENSSMAG00000002552	dkc1	95	75.703	ENSMMUG00000005768	DKC1	95	74.901	Macaca_mulatta
ENSSMAG00000002552	dkc1	95	75.703	ENSMNEG00000034503	DKC1	95	74.704	Macaca_nemestrina
ENSSMAG00000002552	dkc1	95	75.703	ENSMLEG00000034422	DKC1	95	74.704	Mandrillus_leucophaeus
ENSSMAG00000002552	dkc1	79	95.408	ENSMAMG00000005427	dkc1	90	93.766	Mastacembelus_armatus
ENSSMAG00000002552	dkc1	93	86.920	ENSMZEG00005014503	dkc1	89	88.641	Maylandia_zebra
ENSSMAG00000002552	dkc1	81	82.793	ENSMGAG00000009238	DKC1	88	83.047	Meleagris_gallopavo
ENSSMAG00000002552	dkc1	55	74.632	ENSMAUG00000016454	-	92	74.194	Mesocricetus_auratus
ENSSMAG00000002552	dkc1	82	84.029	ENSMICG00000038751	-	80	85.536	Microcebus_murinus
ENSSMAG00000002552	dkc1	83	71.951	ENSMICG00000002818	-	99	76.099	Microcebus_murinus
ENSSMAG00000002552	dkc1	55	71.324	ENSMOCG00000001169	-	92	70.968	Microtus_ochrogaster
ENSSMAG00000002552	dkc1	82	92.079	ENSMMOG00000020348	dkc1	89	92.421	Mola_mola
ENSSMAG00000002552	dkc1	86	81.733	ENSMODG00000009243	DKC1	69	86.616	Monodelphis_domestica
ENSSMAG00000002552	dkc1	87	90.112	ENSMALG00000009454	dkc1	88	89.135	Monopterus_albus
ENSSMAG00000002552	dkc1	82	73.012	MGP_CAROLIEiJ_G0033191	Dkc1	86	84.921	Mus_caroli
ENSSMAG00000002552	dkc1	97	74.162	ENSMUSG00000031403	Dkc1	96	73.373	Mus_musculus
ENSSMAG00000002552	dkc1	86	81.455	MGP_PahariEiJ_G0031735	Dkc1	86	81.038	Mus_pahari
ENSSMAG00000002552	dkc1	86	81.455	MGP_SPRETEiJ_G0034351	Dkc1	86	81.081	Mus_spretus
ENSSMAG00000002552	dkc1	88	79.545	ENSMPUG00000016136	DKC1	73	87.468	Mustela_putorius_furo
ENSSMAG00000002552	dkc1	89	76.993	ENSMLUG00000011918	DKC1	94	72.088	Myotis_lucifugus
ENSSMAG00000002552	dkc1	55	75.368	ENSNGAG00000015724	-	92	74.552	Nannospalax_galili
ENSSMAG00000002552	dkc1	79	93.622	ENSNBRG00000005638	dkc1	83	91.727	Neolamprologus_brichardi
ENSSMAG00000002552	dkc1	88	80.549	ENSNLEG00000014323	DKC1	86	80.537	Nomascus_leucogenys
ENSSMAG00000002552	dkc1	84	78.505	ENSMEUG00000001066	DKC1	91	78.505	Notamacropus_eugenii
ENSSMAG00000002552	dkc1	69	81.341	ENSOPRG00000005248	DKC1	70	80.571	Ochotona_princeps
ENSSMAG00000002552	dkc1	55	75.000	ENSODEG00000000549	-	92	74.194	Octodon_degus
ENSSMAG00000002552	dkc1	82	86.241	ENSODEG00000011816	-	90	79.783	Octodon_degus
ENSSMAG00000002552	dkc1	88	89.310	ENSONIG00000013889	dkc1	89	89.310	Oreochromis_niloticus
ENSSMAG00000002552	dkc1	59	61.921	ENSOANG00000022295	-	86	62.581	Ornithorhynchus_anatinus
ENSSMAG00000002552	dkc1	87	83.102	ENSOANG00000008713	-	91	81.573	Ornithorhynchus_anatinus
ENSSMAG00000002552	dkc1	88	80.778	ENSOCUG00000012646	DKC1	86	81.093	Oryctolagus_cuniculus
ENSSMAG00000002552	dkc1	90	85.403	ENSORLG00000018748	dkc1	84	88.235	Oryzias_latipes
ENSSMAG00000002552	dkc1	94	84.760	ENSOMEG00000005786	dkc1	83	89.627	Oryzias_melastigma
ENSSMAG00000002552	dkc1	88	79.910	ENSOGAG00000003399	DKC1	77	86.284	Otolemur_garnettii
ENSSMAG00000002552	dkc1	88	81.693	ENSOARG00000003047	DKC1	87	81.549	Ovis_aries
ENSSMAG00000002552	dkc1	85	82.938	ENSPPAG00000023820	DKC1	86	80.313	Pan_paniscus
ENSSMAG00000002552	dkc1	79	87.980	ENSPPRG00000009104	DKC1	79	86.783	Panthera_pardus
ENSSMAG00000002552	dkc1	79	87.980	ENSPTIG00000017469	DKC1	81	86.967	Panthera_tigris_altaica
ENSSMAG00000002552	dkc1	95	75.502	ENSPTRG00000022449	DKC1	95	75.099	Pan_troglodytes
ENSSMAG00000002552	dkc1	88	80.778	ENSPTRG00000043416	-	75	80.769	Pan_troglodytes
ENSSMAG00000002552	dkc1	95	75.703	ENSPANG00000011978	DKC1	95	74.704	Papio_anubis
ENSSMAG00000002552	dkc1	85	87.886	ENSPKIG00000008443	dkc1	92	86.143	Paramormyrops_kingsleyae
ENSSMAG00000002552	dkc1	73	89.415	ENSPSIG00000013765	DKC1	86	89.415	Pelodiscus_sinensis
ENSSMAG00000002552	dkc1	93	77.236	ENSPMGG00000004097	dkc1	78	85.377	Periophthalmus_magnuspinnatus
ENSSMAG00000002552	dkc1	66	87.425	ENSPEMG00000013348	Dkc1	84	87.425	Peromyscus_maniculatus_bairdii
ENSSMAG00000002552	dkc1	86	81.308	ENSPCIG00000016706	DKC1	68	86.035	Phascolarctos_cinereus
ENSSMAG00000002552	dkc1	89	87.665	ENSPFOG00000018653	dkc1	90	87.665	Poecilia_formosa
ENSSMAG00000002552	dkc1	89	87.665	ENSPLAG00000003272	dkc1	81	87.665	Poecilia_latipinna
ENSSMAG00000002552	dkc1	89	87.665	ENSPMEG00000010413	dkc1	90	87.665	Poecilia_mexicana
ENSSMAG00000002552	dkc1	89	87.665	ENSPREG00000004100	dkc1	87	85.809	Poecilia_reticulata
ENSSMAG00000002552	dkc1	88	80.778	ENSPPYG00000020892	DKC1	87	80.313	Pongo_abelii
ENSSMAG00000002552	dkc1	76	85.027	ENSPCAG00000015034	DKC1	73	85.561	Procavia_capensis
ENSSMAG00000002552	dkc1	88	80.778	ENSPCOG00000026874	DKC1	87	79.418	Propithecus_coquereli
ENSSMAG00000002552	dkc1	82	84.767	ENSPVAG00000009222	DKC1	86	81.903	Pteropus_vampyrus
ENSSMAG00000002552	dkc1	84	85.779	ENSPNYG00000020063	dkc1	91	84.902	Pundamilia_nyererei
ENSSMAG00000002552	dkc1	86	86.230	ENSPNAG00000005780	dkc1	86	86.105	Pygocentrus_nattereri
ENSSMAG00000002552	dkc1	90	74.893	ENSRNOG00000055562	Dkc1	87	77.528	Rattus_norvegicus
ENSSMAG00000002552	dkc1	95	75.301	ENSRBIG00000028457	DKC1	82	74.704	Rhinopithecus_bieti
ENSSMAG00000002552	dkc1	95	75.703	ENSRROG00000044780	DKC1	95	74.704	Rhinopithecus_roxellana
ENSSMAG00000002552	dkc1	77	70.496	YLR175W	-	90	64.665	Saccharomyces_cerevisiae
ENSSMAG00000002552	dkc1	88	80.734	ENSSBOG00000033746	DKC1	86	80.180	Saimiri_boliviensis_boliviensis
ENSSMAG00000002552	dkc1	88	80.690	ENSSHAG00000002463	DKC1	98	78.664	Sarcophilus_harrisii
ENSSMAG00000002552	dkc1	88	85.590	ENSSFOG00015009585	dkc1	86	87.244	Scleropages_formosus
ENSSMAG00000002552	dkc1	96	88.187	ENSSDUG00000009963	dkc1	89	91.537	Seriola_dumerili
ENSSMAG00000002552	dkc1	89	91.800	ENSSLDG00000019342	dkc1	85	93.659	Seriola_lalandi_dorsalis
ENSSMAG00000002552	dkc1	89	73.820	ENSSARG00000001822	DKC1	88	76.364	Sorex_araneus
ENSSMAG00000002552	dkc1	79	86.445	ENSSPUG00000018907	DKC1	90	76.471	Sphenodon_punctatus
ENSSMAG00000002552	dkc1	94	83.958	ENSSPAG00000002585	dkc1	93	82.150	Stegastes_partitus
ENSSMAG00000002552	dkc1	79	87.980	ENSSSCG00000012823	DKC1	89	82.517	Sus_scrofa
ENSSMAG00000002552	dkc1	82	82.716	ENSTGUG00000006781	DKC1	92	81.598	Taeniopygia_guttata
ENSSMAG00000002552	dkc1	85	88.940	ENSTRUG00000004413	dkc1	86	88.940	Takifugu_rubripes
ENSSMAG00000002552	dkc1	89	68.737	ENSTNIG00000002582	dkc1	90	68.737	Tetraodon_nigroviridis
ENSSMAG00000002552	dkc1	61	80.000	ENSTBEG00000011262	DKC1	86	77.316	Tupaia_belangeri
ENSSMAG00000002552	dkc1	56	88.448	ENSTTRG00000008089	DKC1	55	88.448	Tursiops_truncatus
ENSSMAG00000002552	dkc1	88	80.000	ENSUAMG00000022721	DKC1	86	86.520	Ursus_americanus
ENSSMAG00000002552	dkc1	88	79.545	ENSUMAG00000016899	DKC1	97	85.354	Ursus_maritimus
ENSSMAG00000002552	dkc1	85	68.558	ENSVVUG00000021671	-	76	71.394	Vulpes_vulpes
ENSSMAG00000002552	dkc1	88	78.747	ENSVVUG00000020734	-	79	77.124	Vulpes_vulpes
ENSSMAG00000002552	dkc1	89	82.511	ENSXETG00000032517	DKC1	85	85.047	Xenopus_tropicalis
ENSSMAG00000002552	dkc1	86	85.649	ENSXCOG00000005498	dkc1	93	85.616	Xiphophorus_couchianus
ENSSMAG00000002552	dkc1	89	87.225	ENSXMAG00000004919	dkc1	90	87.225	Xiphophorus_maculatus