EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000002569 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 8628 bases
Position: chr5:198020-206647
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000004153	MMR_HSR1	PF01926.23	0.0001	1	1
ENSSMAP00000004161	MMR_HSR1	PF01926.23	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000004217	-	558	-	ENSSMAP00000004153	185 (aa)	-	-
ENSSMAT00000004225	-	2940	-	ENSSMAP00000004161	206 (aa)	-	A0A2U9BB15

Gene Model

Click here to download ENSSMAG00000002569's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000002569's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000002569	-	83	48.538	ENSSMAG00000004922	rab11bb	77	48.538
ENSSMAG00000002569	-	96	36.946	ENSSMAG00000011579	RAB7A	96	36.946
ENSSMAG00000002569	-	93	45.178	ENSSMAG00000016206	rab11al	91	45.178
ENSSMAG00000002569	-	96	47.475	ENSSMAG00000000660	rab35b	98	47.475
ENSSMAG00000002569	-	95	38.889	ENSSMAG00000002229	zgc:101559	74	42.857
ENSSMAG00000002569	-	97	43.902	ENSSMAG00000004133	rab11a	95	43.902
ENSSMAG00000002569	-	86	36.464	ENSSMAG00000020045	rab36	69	36.464
ENSSMAG00000002569	-	82	38.150	ENSSMAG00000014078	RAB9A	86	38.150
ENSSMAG00000002569	-	84	58.382	ENSSMAG00000004416	-	81	58.382
ENSSMAG00000002569	-	82	30.682	ENSSMAG00000016456	rasd4	82	30.682
ENSSMAG00000002569	-	77	43.902	ENSSMAG00000013733	rab33a	60	43.902
ENSSMAG00000002569	-	80	37.427	ENSSMAG00000017426	rab9a	79	37.427
ENSSMAG00000002569	-	66	30.709	ENSSMAG00000016740	arl8ba	66	30.709
ENSSMAG00000002569	-	72	30.000	ENSSMAG00000008394	arl4d	70	30.000
ENSSMAG00000002569	-	95	38.776	ENSSMAG00000009229	rab5aa	92	38.776
ENSSMAG00000002569	-	91	42.262	ENSSMAG00000009722	rab25a	75	47.799
ENSSMAG00000002569	-	83	32.571	ENSSMAG00000014329	si:cabz01085950.1	86	32.571
ENSSMAG00000002569	-	82	37.500	ENSSMAG00000004343	rab34a	60	36.250
ENSSMAG00000002569	-	90	39.766	ENSSMAG00000020311	rab42a	77	44.311
ENSSMAG00000002569	-	84	58.960	ENSSMAG00000021049	-	86	58.960
ENSSMAG00000002569	-	83	34.078	ENSSMAG00000019926	rab34b	76	34.078
ENSSMAG00000002569	-	82	46.154	ENSSMAG00000011769	si:dkey-16l2.16	75	46.154
ENSSMAG00000002569	-	70	45.033	ENSSMAG00000012178	-	62	45.033
ENSSMAG00000002569	-	84	57.803	ENSSMAG00000017528	rab1ab	97	53.769
ENSSMAG00000002569	-	82	32.353	ENSSMAG00000004806	si:ch73-116o1.2	81	32.353
ENSSMAG00000002569	-	90	31.016	ENSSMAG00000006341	rab23	96	31.156
ENSSMAG00000002569	-	74	30.625	ENSSMAG00000001964	rhebl1	83	30.625
ENSSMAG00000002569	-	91	47.120	ENSSMAG00000001002	rab2a	90	47.120
ENSSMAG00000002569	-	83	44.118	ENSSMAG00000018454	-	79	44.118
ENSSMAG00000002569	-	89	49.462	ENSSMAG00000002500	rab30	92	49.462
ENSSMAG00000002569	-	85	35.593	ENSSMAG00000007370	kras	98	33.166
ENSSMAG00000002569	-	64	30.833	ENSSMAG00000015130	arl8bb	62	30.833
ENSSMAG00000002569	-	80	39.053	ENSSMAG00000006709	rab9b	81	39.053
ENSSMAG00000002569	-	83	47.093	ENSSMAG00000001953	rab39bb	81	47.093
ENSSMAG00000002569	-	77	44.937	ENSSMAG00000015774	rab41	75	44.937
ENSSMAG00000002569	-	85	42.614	ENSSMAG00000000335	rab6bb	93	40.426
ENSSMAG00000002569	-	92	42.632	ENSSMAG00000016183	rab25b	88	42.632
ENSSMAG00000002569	-	83	47.674	ENSSMAG00000018613	-	79	47.674
ENSSMAG00000002569	-	86	52.809	ENSSMAG00000019773	rab15	84	52.809
ENSSMAG00000002569	-	87	41.341	ENSSMAG00000007323	rab5c	88	38.614
ENSSMAG00000002569	-	64	31.667	ENSSMAG00000016416	arl1	63	31.667
ENSSMAG00000002569	-	80	31.285	ENSSMAG00000002148	rasl11a	67	31.285
ENSSMAG00000002569	-	86	35.196	ENSSMAG00000014984	rras	88	35.196
ENSSMAG00000002569	-	78	40.373	ENSSMAG00000010140	rab22a	84	39.873
ENSSMAG00000002569	-	86	43.258	ENSSMAG00000002969	rab18a	86	43.258
ENSSMAG00000002569	-	83	46.821	ENSSMAG00000012678	rab12	71	46.821
ENSSMAG00000002569	-	76	32.911	ENSSMAG00000004606	rabl2	69	32.911
ENSSMAG00000002569	-	77	46.835	ENSSMAG00000017205	-	76	45.570
ENSSMAG00000002569	-	64	31.092	ENSSMAG00000002487	-	68	31.092
ENSSMAG00000002569	-	83	44.706	ENSSMAG00000003166	rab14	79	44.706
ENSSMAG00000002569	-	79	46.951	ENSSMAG00000011814	rab18b	80	46.951
ENSSMAG00000002569	-	87	51.111	ENSSMAG00000005651	-	85	51.111
ENSSMAG00000002569	-	70	30.935	ENSSMAG00000020198	nkiras1	72	30.935
ENSSMAG00000002569	-	68	30.469	ENSSMAG00000017643	arl2	70	30.657
ENSSMAG00000002569	-	76	30.625	ENSSMAG00000009101	-	75	30.625
ENSSMAG00000002569	-	94	37.853	ENSSMAG00000015955	rab33ba	80	41.026
ENSSMAG00000002569	-	100	67.633	ENSSMAG00000016376	-	100	67.633
ENSSMAG00000002569	-	87	37.778	ENSSMAG00000008745	hrasb	93	37.778
ENSSMAG00000002569	-	96	37.438	ENSSMAG00000001414	-	85	37.438
ENSSMAG00000002569	-	83	35.795	ENSSMAG00000013945	si:dkey-13a21.4	85	35.795
ENSSMAG00000002569	-	66	30.159	ENSSMAG00000007502	nkiras2	65	30.159
ENSSMAG00000002569	-	78	30.357	ENSSMAG00000000032	dnajc27	62	30.357
ENSSMAG00000002569	-	84	58.382	ENSSMAG00000009201	rab1ba	86	58.382

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000002569	-	100	67.150	ENSAPOG00000001040	-	100	67.150	Acanthochromis_polyacanthus
ENSSMAG00000002569	-	100	86.893	ENSACIG00000003157	-	100	86.893	Amphilophus_citrinellus
ENSSMAG00000002569	-	100	67.150	ENSAOCG00000015908	-	100	67.150	Amphiprion_ocellaris
ENSSMAG00000002569	-	100	67.150	ENSAPEG00000004121	-	100	67.150	Amphiprion_percula
ENSSMAG00000002569	-	100	66.667	ENSATEG00000023662	-	100	66.667	Anabas_testudineus
ENSSMAG00000002569	-	100	67.633	ENSACLG00000019643	-	100	67.633	Astatotilapia_calliptera
ENSSMAG00000002569	-	100	64.563	ENSCVAG00000022649	-	100	64.563	Cyprinodon_variegatus
ENSSMAG00000002569	-	84	91.329	ENSDARG00000103934	megf8	100	91.329	Danio_rerio
ENSSMAG00000002569	-	100	64.734	ENSGAFG00000014787	-	100	64.734	Gambusia_affinis
ENSSMAG00000002569	-	100	67.476	ENSHBUG00000003728	-	100	67.476	Haplochromis_burtoni
ENSSMAG00000002569	-	100	67.633	ENSMZEG00005015817	-	100	67.633	Maylandia_zebra
ENSSMAG00000002569	-	100	66.019	ENSMMOG00000003924	-	100	66.019	Mola_mola
ENSSMAG00000002569	-	100	67.150	ENSMALG00000020807	-	100	67.150	Monopterus_albus
ENSSMAG00000002569	-	58	79.630	ENSOPRG00000014416	-	100	79.630	Ochotona_princeps
ENSSMAG00000002569	-	100	65.049	ENSORLG00000025395	-	100	65.049	Oryzias_latipes
ENSSMAG00000002569	-	100	65.534	ENSORLG00020009535	-	100	65.534	Oryzias_latipes_hni
ENSSMAG00000002569	-	100	65.534	ENSORLG00015015518	-	100	65.534	Oryzias_latipes_hsok
ENSSMAG00000002569	-	100	65.534	ENSPKIG00000014528	-	100	65.534	Paramormyrops_kingsleyae
ENSSMAG00000002569	-	100	65.700	ENSPFOG00000014418	-	100	65.700	Poecilia_formosa
ENSSMAG00000002569	-	100	65.700	ENSPLAG00000003181	-	100	65.700	Poecilia_latipinna
ENSSMAG00000002569	-	100	65.700	ENSPMEG00000008020	-	100	65.700	Poecilia_mexicana
ENSSMAG00000002569	-	100	65.700	ENSPMEG00000022988	-	100	65.700	Poecilia_mexicana
ENSSMAG00000002569	-	100	66.990	ENSPNYG00000004681	-	100	66.990	Pundamilia_nyererei
ENSSMAG00000002569	-	100	65.714	ENSSFOG00015021754	rab13	100	65.714	Scleropages_formosus
ENSSMAG00000002569	-	100	67.150	ENSSDUG00000006307	-	100	67.150	Seriola_dumerili
ENSSMAG00000002569	-	100	67.150	ENSSLDG00000015823	-	100	67.150	Seriola_lalandi_dorsalis
ENSSMAG00000002569	-	100	68.116	ENSSPAG00000022440	-	100	68.116	Stegastes_partitus
ENSSMAG00000002569	-	100	67.150	ENSTNIG00000018319	-	100	67.150	Tetraodon_nigroviridis
ENSSMAG00000002569	-	100	65.217	ENSXMAG00000016094	-	100	65.217	Xiphophorus_maculatus