EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000002598 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 6136 bases
Position: chr19:13478374-13484509
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000004194	zf-C2H2	PF00096.26	1e-17	1	4
ENSSMAP00000004194	zf-C2H2	PF00096.26	1e-17	2	4
ENSSMAP00000004194	zf-C2H2	PF00096.26	1e-17	3	4
ENSSMAP00000004194	zf-C2H2	PF00096.26	1e-17	4	4
ENSSMAP00000004194	zf-met	PF12874.7	2.2e-06	1	2
ENSSMAP00000004194	zf-met	PF12874.7	2.2e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000004258	-	5337	-	ENSSMAP00000004194	444 (aa)	-	A0A2U9CSW7

Gene Model

Click here to download ENSSMAG00000002598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000002598's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000002598	-	55	42.857	ENSSMAG00000013291	-	92	40.506
ENSSMAG00000002598	-	78	48.193	ENSSMAG00000007561	znf236	58	48.193
ENSSMAG00000002598	-	52	45.000	ENSSMAG00000006197	-	85	53.030
ENSSMAG00000002598	-	69	37.349	ENSSMAG00000017045	-	83	39.597
ENSSMAG00000002598	-	63	36.429	ENSSMAG00000005081	-	79	36.429
ENSSMAG00000002598	-	50	36.129	ENSSMAG00000009115	-	92	37.037
ENSSMAG00000002598	-	50	37.662	ENSSMAG00000014844	-	72	37.662
ENSSMAG00000002598	-	57	44.595	ENSSMAG00000013663	-	85	54.930
ENSSMAG00000002598	-	52	46.067	ENSSMAG00000015356	-	82	46.067

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000002598	-	99	70.678	ENSATEG00000023773	-	97	70.678	Anabas_testudineus
ENSSMAG00000002598	-	99	56.570	ENSCSEG00000011817	-	97	56.570	Cynoglossus_semilaevis
ENSSMAG00000002598	-	50	43.333	ENSDARG00000098087	si:dkey-30f3.2	79	43.333	Danio_rerio
ENSSMAG00000002598	-	52	44.366	ENSDARG00000089715	si:cabz01054394.7	72	53.659	Danio_rerio
ENSSMAG00000002598	-	51	40.714	ENSDARG00000103244	CABZ01081752.3	80	40.714	Danio_rerio
ENSSMAG00000002598	-	53	42.754	ENSFHEG00000021020	-	64	53.261	Fundulus_heteroclitus
ENSSMAG00000002598	-	99	58.889	ENSFHEG00000015400	-	96	58.889	Fundulus_heteroclitus
ENSSMAG00000002598	-	99	61.641	ENSGAFG00000013839	-	99	62.528	Gambusia_affinis
ENSSMAG00000002598	-	53	32.787	ENSKMAG00000011441	-	76	34.839	Kryptolebias_marmoratus
ENSSMAG00000002598	-	99	70.288	ENSMAMG00000020468	-	99	70.288	Mastacembelus_armatus
ENSSMAG00000002598	-	73	78.378	ENSNBRG00000019881	-	98	78.378	Neolamprologus_brichardi
ENSSMAG00000002598	-	69	37.857	ENSORLG00000012434	znf1064	81	37.857	Oryzias_latipes
ENSSMAG00000002598	-	63	53.214	ENSORLG00015013828	-	88	52.143	Oryzias_latipes_hsok
ENSSMAG00000002598	-	99	54.139	ENSOMEG00000005928	-	98	54.139	Oryzias_melastigma
ENSSMAG00000002598	-	64	66.304	ENSPFOG00000005998	-	89	63.732	Poecilia_formosa
ENSSMAG00000002598	-	67	39.394	ENSPFOG00000022423	-	75	44.444	Poecilia_formosa
ENSSMAG00000002598	-	63	42.282	ENSPFOG00000003366	-	78	42.282	Poecilia_formosa
ENSSMAG00000002598	-	99	59.430	ENSPLAG00000001674	-	97	61.184	Poecilia_latipinna
ENSSMAG00000002598	-	99	58.297	ENSPMEG00000013200	-	98	59.607	Poecilia_mexicana
ENSSMAG00000002598	-	99	74.464	ENSSDUG00000015456	-	97	74.678	Seriola_dumerili
ENSSMAG00000002598	-	99	69.778	ENSSPAG00000017203	-	97	69.778	Stegastes_partitus
ENSSMAG00000002598	-	99	62.009	ENSXMAG00000021195	-	97	61.354	Xiphophorus_maculatus