EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000002715 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482
Alias: -
Full Name: zgc:171482
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 26235 bases
Position: chr15:6554969-6581203
Accession: ZDB-GENE-080204-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000004393	zf-met	PF12874.7	1e-14	1	2
ENSSMAP00000004393	zf-met	PF12874.7	1e-14	2	2
ENSSMAP00000004393	zf-C2H2_jaz	PF12171.8	3.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000004460	-	1222	-	ENSSMAP00000004393	156 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000002715's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000002715's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000002715	zgc:171482	79	70.161	ENSSMAG00000017693	zmat4a	74	70.161

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000002715	zgc:171482	81	96.063	ENSAPOG00000019970	zgc:171482	79	96.063	Acanthochromis_polyacanthus
ENSSMAG00000002715	zgc:171482	74	99.138	ENSACIG00000021512	zgc:171482	87	99.138	Amphilophus_citrinellus
ENSSMAG00000002715	zgc:171482	84	91.603	ENSAOCG00000000751	zgc:171482	96	91.603	Amphiprion_ocellaris
ENSSMAG00000002715	zgc:171482	86	94.030	ENSAPEG00000014154	zgc:171482	96	94.030	Amphiprion_percula
ENSSMAG00000002715	zgc:171482	74	97.391	ENSATEG00000001371	zgc:171482	79	90.152	Anabas_testudineus
ENSSMAG00000002715	zgc:171482	87	90.441	ENSACLG00000010511	zgc:171482	94	90.441	Astatotilapia_calliptera
ENSSMAG00000002715	zgc:171482	77	90.000	ENSAMXG00000002299	zgc:171482	91	90.000	Astyanax_mexicanus
ENSSMAG00000002715	zgc:171482	76	95.763	ENSCSEG00000006509	zgc:171482	77	95.763	Cynoglossus_semilaevis
ENSSMAG00000002715	zgc:171482	76	97.458	ENSCVAG00000013606	zgc:171482	80	97.458	Cyprinodon_variegatus
ENSSMAG00000002715	zgc:171482	78	89.256	ENSDARG00000074415	zgc:171482	91	88.525	Danio_rerio
ENSSMAG00000002715	zgc:171482	87	87.407	ENSELUG00000021817	zgc:171482	97	87.407	Esox_lucius
ENSSMAG00000002715	zgc:171482	74	71.795	ENSELUG00000017517	-	60	85.393	Esox_lucius
ENSSMAG00000002715	zgc:171482	82	95.312	ENSFHEG00000002233	zgc:171482	91	95.312	Fundulus_heteroclitus
ENSSMAG00000002715	zgc:171482	80	94.400	ENSGMOG00000010508	zgc:171482	79	94.400	Gadus_morhua
ENSSMAG00000002715	zgc:171482	76	98.305	ENSGAFG00000009398	zgc:171482	77	98.305	Gambusia_affinis
ENSSMAG00000002715	zgc:171482	80	95.200	ENSGACG00000007680	zgc:171482	80	95.200	Gasterosteus_aculeatus
ENSSMAG00000002715	zgc:171482	85	92.481	ENSHBUG00000023289	zgc:171482	100	92.481	Haplochromis_burtoni
ENSSMAG00000002715	zgc:171482	79	89.683	ENSHCOG00000018086	zgc:171482	94	89.683	Hippocampus_comes
ENSSMAG00000002715	zgc:171482	78	90.909	ENSIPUG00000000361	zgc:171482	88	90.909	Ictalurus_punctatus
ENSSMAG00000002715	zgc:171482	85	90.909	ENSKMAG00000005077	zgc:171482	68	90.909	Kryptolebias_marmoratus
ENSSMAG00000002715	zgc:171482	83	93.846	ENSLBEG00000023823	zgc:171482	93	93.846	Labrus_bergylta
ENSSMAG00000002715	zgc:171482	78	90.909	ENSLOCG00000008863	zgc:171482	77	90.909	Lepisosteus_oculatus
ENSSMAG00000002715	zgc:171482	92	90.210	ENSMAMG00000001031	zgc:171482	90	90.210	Mastacembelus_armatus
ENSSMAG00000002715	zgc:171482	76	90.678	ENSMZEG00005027721	zgc:171482	79	90.678	Maylandia_zebra
ENSSMAG00000002715	zgc:171482	84	94.656	ENSMMOG00000010523	zgc:171482	100	94.656	Mola_mola
ENSSMAG00000002715	zgc:171482	79	95.122	ENSMALG00000017883	zgc:171482	80	95.122	Monopterus_albus
ENSSMAG00000002715	zgc:171482	74	97.414	ENSNBRG00000021035	zgc:171482	87	97.414	Neolamprologus_brichardi
ENSSMAG00000002715	zgc:171482	81	94.444	ENSONIG00000018365	zgc:171482	78	94.444	Oreochromis_niloticus
ENSSMAG00000002715	zgc:171482	83	96.899	ENSORLG00000007607	zgc:171482	91	96.899	Oryzias_latipes
ENSSMAG00000002715	zgc:171482	83	96.124	ENSORLG00020003563	zgc:171482	91	96.124	Oryzias_latipes_hni
ENSSMAG00000002715	zgc:171482	83	96.899	ENSORLG00015008552	zgc:171482	91	96.899	Oryzias_latipes_hsok
ENSSMAG00000002715	zgc:171482	88	93.431	ENSOMEG00000003526	zgc:171482	96	93.431	Oryzias_melastigma
ENSSMAG00000002715	zgc:171482	77	92.500	ENSPKIG00000015911	-	83	92.500	Paramormyrops_kingsleyae
ENSSMAG00000002715	zgc:171482	71	90.909	ENSPKIG00000016244	zgc:171482	78	90.909	Paramormyrops_kingsleyae
ENSSMAG00000002715	zgc:171482	80	95.200	ENSPMGG00000020230	zgc:171482	82	95.200	Periophthalmus_magnuspinnatus
ENSSMAG00000002715	zgc:171482	86	93.284	ENSPFOG00000001974	zgc:171482	79	93.284	Poecilia_formosa
ENSSMAG00000002715	zgc:171482	82	95.312	ENSPLAG00000003327	zgc:171482	79	95.312	Poecilia_latipinna
ENSSMAG00000002715	zgc:171482	83	96.124	ENSPMEG00000004988	zgc:171482	78	96.124	Poecilia_mexicana
ENSSMAG00000002715	zgc:171482	83	94.615	ENSPREG00000019241	zgc:171482	94	94.615	Poecilia_reticulata
ENSSMAG00000002715	zgc:171482	87	90.441	ENSPNYG00000007773	zgc:171482	94	90.441	Pundamilia_nyererei
ENSSMAG00000002715	zgc:171482	74	93.043	ENSPNAG00000007619	zgc:171482	79	85.385	Pygocentrus_nattereri
ENSSMAG00000002715	zgc:171482	74	87.931	ENSSFOG00015016149	zgc:171482	93	87.931	Scleropages_formosus
ENSSMAG00000002715	zgc:171482	79	86.179	ENSSFOG00015021238	zgc:171482	80	88.235	Scleropages_formosus
ENSSMAG00000002715	zgc:171482	87	90.441	ENSSDUG00000008773	zgc:171482	96	90.441	Seriola_dumerili
ENSSMAG00000002715	zgc:171482	83	93.846	ENSSLDG00000019510	zgc:171482	92	93.846	Seriola_lalandi_dorsalis
ENSSMAG00000002715	zgc:171482	79	97.581	ENSSPAG00000013724	zgc:171482	98	97.581	Stegastes_partitus
ENSSMAG00000002715	zgc:171482	81	91.339	ENSTRUG00000005705	zgc:171482	75	91.339	Takifugu_rubripes
ENSSMAG00000002715	zgc:171482	85	71.212	ENSTNIG00000008679	zgc:171482	80	71.212	Tetraodon_nigroviridis
ENSSMAG00000002715	zgc:171482	70	76.786	ENSXETG00000013525	zmat4	76	76.786	Xenopus_tropicalis
ENSSMAG00000002715	zgc:171482	76	87.395	ENSXMAG00000002641	zgc:171482	77	87.395	Xiphophorus_maculatus