EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000002782 (Gene tree)
Gene ID: -
Gene Symbol: gfi1ab
Alias: gfi1|gfi1.2|gfi1b
Full Name: growth factor independent 1A transcription repressor b
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 6596 bases
Position: chr12:22140792-22147387
Accession: ZDB-GENE-040116-8
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000004471	zf-C2H2	PF00096.26	2.2e-27	1	6
ENSSMAP00000004471	zf-C2H2	PF00096.26	2.2e-27	2	6
ENSSMAP00000004471	zf-C2H2	PF00096.26	2.2e-27	3	6
ENSSMAP00000004471	zf-C2H2	PF00096.26	2.2e-27	4	6
ENSSMAP00000004471	zf-C2H2	PF00096.26	2.2e-27	5	6
ENSSMAP00000004471	zf-C2H2	PF00096.26	2.2e-27	6	6
ENSSMAP00000004471	zf-met	PF12874.7	4.6e-06	1	2
ENSSMAP00000004471	zf-met	PF12874.7	4.6e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000004543	-	3087	-	ENSSMAP00000004471	389 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000002782's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000002782's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000002782	gfi1ab	63	43.810	ENSSMAG00000007561	znf236	61	43.810
ENSSMAG00000002782	gfi1ab	64	47.682	ENSSMAG00000005076	-	88	56.250
ENSSMAG00000002782	gfi1ab	100	60.837	ENSSMAG00000006797	gfi1aa	100	61.765
ENSSMAG00000002782	gfi1ab	51	44.720	ENSSMAG00000021251	-	94	44.720
ENSSMAG00000002782	gfi1ab	70	34.637	ENSSMAG00000008907	zbtb41	76	34.637
ENSSMAG00000002782	gfi1ab	99	50.900	ENSSMAG00000015181	gfi1b	97	50.900
ENSSMAG00000002782	gfi1ab	55	43.452	ENSSMAG00000006197	-	93	43.750
ENSSMAG00000002782	gfi1ab	54	41.045	ENSSMAG00000015849	znf319b	87	39.645
ENSSMAG00000002782	gfi1ab	57	40.541	ENSSMAG00000019980	-	61	43.609
ENSSMAG00000002782	gfi1ab	53	36.970	ENSSMAG00000008308	-	61	36.970
ENSSMAG00000002782	gfi1ab	52	41.872	ENSSMAG00000015282	-	75	47.059
ENSSMAG00000002782	gfi1ab	52	41.176	ENSSMAG00000002391	ZNF319	91	41.176

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000002782	gfi1ab	100	63.551	ENSG00000162676	GFI1	100	64.085	Homo_sapiens
ENSSMAG00000002782	gfi1ab	100	83.969	ENSAPOG00000015189	gfi1ab	100	83.969	Acanthochromis_polyacanthus
ENSSMAG00000002782	gfi1ab	100	80.256	ENSACIG00000016354	gfi1ab	100	80.256	Amphilophus_citrinellus
ENSSMAG00000002782	gfi1ab	100	74.615	ENSAOCG00000008339	gfi1ab	100	74.615	Amphiprion_ocellaris
ENSSMAG00000002782	gfi1ab	100	84.733	ENSAPEG00000023870	gfi1ab	100	84.733	Amphiprion_percula
ENSSMAG00000002782	gfi1ab	100	79.177	ENSATEG00000009167	gfi1ab	89	79.177	Anabas_testudineus
ENSSMAG00000002782	gfi1ab	86	65.903	ENSAPLG00000015700	GFI1	99	65.903	Anas_platyrhynchos
ENSSMAG00000002782	gfi1ab	100	64.128	ENSACAG00000004498	GFI1	100	65.196	Anolis_carolinensis
ENSSMAG00000002782	gfi1ab	100	63.294	ENSANAG00000019656	GFI1	100	63.765	Aotus_nancymaae
ENSSMAG00000002782	gfi1ab	100	82.353	ENSACLG00000026458	gfi1ab	93	82.353	Astatotilapia_calliptera
ENSSMAG00000002782	gfi1ab	100	62.369	ENSAMXG00000006669	GFI1	100	68.421	Astyanax_mexicanus
ENSSMAG00000002782	gfi1ab	100	63.889	ENSAMXG00000039600	gfi1ab	100	63.636	Astyanax_mexicanus
ENSSMAG00000002782	gfi1ab	100	62.676	ENSBTAG00000016723	GFI1	100	63.318	Bos_taurus
ENSSMAG00000002782	gfi1ab	100	63.318	ENSCJAG00000017609	GFI1	100	63.615	Callithrix_jacchus
ENSSMAG00000002782	gfi1ab	100	62.150	ENSCAFG00000020155	GFI1	100	62.295	Canis_familiaris
ENSSMAG00000002782	gfi1ab	100	62.150	ENSCAFG00020013371	GFI1	88	62.295	Canis_lupus_dingo
ENSSMAG00000002782	gfi1ab	100	62.207	ENSCHIG00000016135	GFI1	100	62.850	Capra_hircus
ENSSMAG00000002782	gfi1ab	100	61.717	ENSCPOG00000011727	GFI1	100	61.894	Cavia_porcellus
ENSSMAG00000002782	gfi1ab	100	63.059	ENSCCAG00000036072	GFI1	100	63.529	Cebus_capucinus
ENSSMAG00000002782	gfi1ab	100	63.785	ENSCATG00000037873	GFI1	100	64.319	Cercocebus_atys
ENSSMAG00000002782	gfi1ab	100	66.584	ENSCLAG00000005915	GFI1	100	61.136	Chinchilla_lanigera
ENSSMAG00000002782	gfi1ab	98	58.649	ENSCSAG00000001469	GFI1	100	59.239	Chlorocebus_sabaeus
ENSSMAG00000002782	gfi1ab	100	63.785	ENSCANG00000034077	GFI1	100	64.319	Colobus_angolensis_palliatus
ENSSMAG00000002782	gfi1ab	100	61.395	ENSCGRG00001015432	Gfi1	100	62.529	Cricetulus_griseus_chok1gshd
ENSSMAG00000002782	gfi1ab	100	61.905	ENSCSEG00000017729	GFI1	100	62.155	Cynoglossus_semilaevis
ENSSMAG00000002782	gfi1ab	100	76.336	ENSCVAG00000011828	gfi1ab	100	76.336	Cyprinodon_variegatus
ENSSMAG00000002782	gfi1ab	100	58.867	ENSCVAG00000004930	GFI1	100	60.345	Cyprinodon_variegatus
ENSSMAG00000002782	gfi1ab	100	69.231	ENSDARG00000044457	gfi1ab	100	68.983	Danio_rerio
ENSSMAG00000002782	gfi1ab	100	61.751	ENSDNOG00000000782	GFI1	97	62.645	Dasypus_novemcinctus
ENSSMAG00000002782	gfi1ab	100	62.972	ENSEASG00005015509	GFI1	86	63.121	Equus_asinus_asinus
ENSSMAG00000002782	gfi1ab	93	54.156	ENSECAG00000006647	GFI1	94	55.138	Equus_caballus
ENSSMAG00000002782	gfi1ab	100	60.613	ENSEEUG00000000198	GFI1	100	61.033	Erinaceus_europaeus
ENSSMAG00000002782	gfi1ab	100	60.784	ENSELUG00000019033	GFI1	100	61.029	Esox_lucius
ENSSMAG00000002782	gfi1ab	100	70.123	ENSELUG00000003015	gfi1ab	99	70.370	Esox_lucius
ENSSMAG00000002782	gfi1ab	100	61.827	ENSFCAG00000005914	GFI1	100	62.529	Felis_catus
ENSSMAG00000002782	gfi1ab	100	62.376	ENSFHEG00000000341	GFI1	100	62.624	Fundulus_heteroclitus
ENSSMAG00000002782	gfi1ab	100	78.372	ENSFHEG00000010997	gfi1ab	100	78.372	Fundulus_heteroclitus
ENSSMAG00000002782	gfi1ab	100	73.028	ENSGMOG00000007737	gfi1ab	100	73.028	Gadus_morhua
ENSSMAG00000002782	gfi1ab	100	62.927	ENSGALG00000043650	GFI1	100	63.415	Gallus_gallus
ENSSMAG00000002782	gfi1ab	100	79.747	ENSGAFG00000016637	gfi1ab	100	79.747	Gambusia_affinis
ENSSMAG00000002782	gfi1ab	100	59.406	ENSGAFG00000018063	GFI1	100	61.858	Gambusia_affinis
ENSSMAG00000002782	gfi1ab	100	81.491	ENSGACG00000004257	gfi1ab	97	81.748	Gasterosteus_aculeatus
ENSSMAG00000002782	gfi1ab	100	63.551	ENSGGOG00000005320	GFI1	100	64.085	Gorilla_gorilla
ENSSMAG00000002782	gfi1ab	100	81.282	ENSHBUG00000011969	gfi1ab	100	81.282	Haplochromis_burtoni
ENSSMAG00000002782	gfi1ab	100	63.700	ENSHGLG00000008020	GFI1	100	64.169	Heterocephalus_glaber_female
ENSSMAG00000002782	gfi1ab	100	63.700	ENSHGLG00100000610	GFI1	100	64.169	Heterocephalus_glaber_male
ENSSMAG00000002782	gfi1ab	100	58.794	ENSHCOG00000019555	GFI1	100	72.973	Hippocampus_comes
ENSSMAG00000002782	gfi1ab	100	62.350	ENSHCOG00000008590	gfi1ab	100	62.350	Hippocampus_comes
ENSSMAG00000002782	gfi1ab	100	61.634	ENSIPUG00000013414	GFI1	100	61.809	Ictalurus_punctatus
ENSSMAG00000002782	gfi1ab	100	66.247	ENSIPUG00000010071	gfi1ab	87	66.499	Ictalurus_punctatus
ENSSMAG00000002782	gfi1ab	99	64.706	ENSIPUG00000021407	-	52	64.706	Ictalurus_punctatus
ENSSMAG00000002782	gfi1ab	100	62.529	ENSSTOG00000014583	GFI1	100	63.134	Ictidomys_tridecemlineatus
ENSSMAG00000002782	gfi1ab	100	76.923	ENSKMAG00000003810	gfi1ab	100	76.923	Kryptolebias_marmoratus
ENSSMAG00000002782	gfi1ab	100	83.632	ENSLBEG00000027776	gfi1ab	100	83.632	Labrus_bergylta
ENSSMAG00000002782	gfi1ab	100	65.012	ENSLACG00000013362	GFI1	98	65.012	Latimeria_chalumnae
ENSSMAG00000002782	gfi1ab	99	45.385	ENSLACG00000017590	-	99	45.385	Latimeria_chalumnae
ENSSMAG00000002782	gfi1ab	100	68.329	ENSLOCG00000004711	gfi1ab	100	68.579	Lepisosteus_oculatus
ENSSMAG00000002782	gfi1ab	100	62.619	ENSLAFG00000018346	GFI1	100	63.095	Loxodonta_africana
ENSSMAG00000002782	gfi1ab	100	63.785	ENSMFAG00000045801	GFI1	100	64.319	Macaca_fascicularis
ENSSMAG00000002782	gfi1ab	100	63.785	ENSMNEG00000036338	GFI1	100	64.319	Macaca_nemestrina
ENSSMAG00000002782	gfi1ab	100	63.785	ENSMLEG00000036181	GFI1	100	64.319	Mandrillus_leucophaeus
ENSSMAG00000002782	gfi1ab	100	82.519	ENSMAMG00000008125	gfi1ab	100	82.519	Mastacembelus_armatus
ENSSMAG00000002782	gfi1ab	100	82.097	ENSMZEG00005009895	gfi1ab	100	82.097	Maylandia_zebra
ENSSMAG00000002782	gfi1ab	86	66.092	ENSMGAG00000008187	GFI1	99	66.667	Meleagris_gallopavo
ENSSMAG00000002782	gfi1ab	100	61.072	ENSMICG00000047208	GFI1	100	61.949	Microcebus_murinus
ENSSMAG00000002782	gfi1ab	100	72.980	ENSMMOG00000005556	gfi1ab	100	72.980	Mola_mola
ENSSMAG00000002782	gfi1ab	100	62.615	ENSMODG00000011802	GFI1	100	62.125	Monodelphis_domestica
ENSSMAG00000002782	gfi1ab	100	78.406	ENSMALG00000014672	gfi1ab	100	78.406	Monopterus_albus
ENSSMAG00000002782	gfi1ab	100	61.682	MGP_CAROLIEiJ_G0027508	Gfi1	100	97.037	Mus_caroli
ENSSMAG00000002782	gfi1ab	100	61.449	ENSMUSG00000029275	Gfi1	100	61.449	Mus_musculus
ENSSMAG00000002782	gfi1ab	100	61.449	MGP_PahariEiJ_G0017280	Gfi1	100	97.037	Mus_pahari
ENSSMAG00000002782	gfi1ab	100	61.449	MGP_SPRETEiJ_G0028507	Gfi1	100	61.449	Mus_spretus
ENSSMAG00000002782	gfi1ab	100	64.750	ENSMPUG00000004178	GFI1	97	65.250	Mustela_putorius_furo
ENSSMAG00000002782	gfi1ab	100	61.305	ENSMLUG00000015191	GFI1	97	61.717	Myotis_lucifugus
ENSSMAG00000002782	gfi1ab	100	80.303	ENSNBRG00000015774	gfi1ab	100	80.303	Neolamprologus_brichardi
ENSSMAG00000002782	gfi1ab	86	65.591	ENSNLEG00000010470	GFI1	91	66.216	Nomascus_leucogenys
ENSSMAG00000002782	gfi1ab	100	62.037	ENSOPRG00000001473	GFI1	100	62.903	Ochotona_princeps
ENSSMAG00000002782	gfi1ab	100	82.353	ENSONIG00000019246	gfi1ab	100	82.353	Oreochromis_niloticus
ENSSMAG00000002782	gfi1ab	98	55.820	ENSOCUG00000023553	GFI1	93	56.693	Oryctolagus_cuniculus
ENSSMAG00000002782	gfi1ab	100	75.959	ENSORLG00000013806	gfi1ab	100	75.959	Oryzias_latipes
ENSSMAG00000002782	gfi1ab	100	62.312	ENSORLG00000005060	GFI1	100	62.312	Oryzias_latipes
ENSSMAG00000002782	gfi1ab	100	57.143	ENSORLG00020002817	GFI1	100	57.143	Oryzias_latipes_hni
ENSSMAG00000002782	gfi1ab	100	75.959	ENSORLG00020001602	gfi1ab	100	75.959	Oryzias_latipes_hni
ENSSMAG00000002782	gfi1ab	100	60.199	ENSORLG00015006070	GFI1	100	61.443	Oryzias_latipes_hsok
ENSSMAG00000002782	gfi1ab	100	62.907	ENSOMEG00000016722	GFI1	100	62.907	Oryzias_melastigma
ENSSMAG00000002782	gfi1ab	100	64.706	ENSOGAG00000027913	GFI1	100	63.613	Otolemur_garnettii
ENSSMAG00000002782	gfi1ab	98	49.102	ENSOARG00000016329	GFI1	94	49.102	Ovis_aries
ENSSMAG00000002782	gfi1ab	100	65.816	ENSPPAG00000042186	GFI1	100	66.327	Pan_paniscus
ENSSMAG00000002782	gfi1ab	100	61.827	ENSPPRG00000007521	GFI1	100	62.529	Panthera_pardus
ENSSMAG00000002782	gfi1ab	100	63.318	ENSPTRG00000043053	GFI1	100	63.850	Pan_troglodytes
ENSSMAG00000002782	gfi1ab	100	63.785	ENSPANG00000016433	GFI1	100	64.319	Papio_anubis
ENSSMAG00000002782	gfi1ab	100	69.727	ENSPKIG00000004263	GFI1	100	69.727	Paramormyrops_kingsleyae
ENSSMAG00000002782	gfi1ab	86	65.607	ENSPSIG00000008734	GFI1	96	65.896	Pelodiscus_sinensis
ENSSMAG00000002782	gfi1ab	100	72.449	ENSPMGG00000012546	gfi1ab	100	72.959	Periophthalmus_magnuspinnatus
ENSSMAG00000002782	gfi1ab	59	71.186	ENSPMGG00000011041	GFI1	64	91.667	Periophthalmus_magnuspinnatus
ENSSMAG00000002782	gfi1ab	100	64.103	ENSPCIG00000013728	GFI1	100	64.871	Phascolarctos_cinereus
ENSSMAG00000002782	gfi1ab	100	78.734	ENSPFOG00000023214	gfi1ab	100	78.734	Poecilia_formosa
ENSSMAG00000002782	gfi1ab	100	78.734	ENSPLAG00000010879	gfi1ab	100	78.734	Poecilia_latipinna
ENSSMAG00000002782	gfi1ab	100	60.680	ENSPLAG00000005376	GFI1	91	62.683	Poecilia_latipinna
ENSSMAG00000002782	gfi1ab	100	59.553	ENSPMEG00000019299	GFI1	100	62.222	Poecilia_mexicana
ENSSMAG00000002782	gfi1ab	100	79.241	ENSPMEG00000013694	gfi1ab	100	79.241	Poecilia_mexicana
ENSSMAG00000002782	gfi1ab	100	56.266	ENSPREG00000007997	GFI1	100	56.345	Poecilia_reticulata
ENSSMAG00000002782	gfi1ab	100	79.135	ENSPREG00000014097	gfi1ab	100	79.135	Poecilia_reticulata
ENSSMAG00000002782	gfi1ab	100	52.448	ENSPCAG00000011020	GFI1	100	52.448	Procavia_capensis
ENSSMAG00000002782	gfi1ab	100	61.412	ENSPCOG00000020540	GFI1	100	62.295	Propithecus_coquereli
ENSSMAG00000002782	gfi1ab	100	62.796	ENSPVAG00000006928	GFI1	100	63.915	Pteropus_vampyrus
ENSSMAG00000002782	gfi1ab	100	82.353	ENSPNYG00000021183	gfi1ab	100	82.353	Pundamilia_nyererei
ENSSMAG00000002782	gfi1ab	100	57.778	ENSPNAG00000028014	GFI1	100	58.122	Pygocentrus_nattereri
ENSSMAG00000002782	gfi1ab	100	64.589	ENSPNAG00000027258	gfi1ab	100	64.339	Pygocentrus_nattereri
ENSSMAG00000002782	gfi1ab	100	65.663	ENSPNAG00000014299	-	97	65.663	Pygocentrus_nattereri
ENSSMAG00000002782	gfi1ab	100	61.827	ENSRNOG00000002042	Gfi1	100	61.647	Rattus_norvegicus
ENSSMAG00000002782	gfi1ab	100	63.785	ENSRBIG00000036467	GFI1	100	64.319	Rhinopithecus_bieti
ENSSMAG00000002782	gfi1ab	100	63.785	ENSRROG00000031687	GFI1	100	64.319	Rhinopithecus_roxellana
ENSSMAG00000002782	gfi1ab	100	62.850	ENSSBOG00000031300	GFI1	100	63.529	Saimiri_boliviensis_boliviensis
ENSSMAG00000002782	gfi1ab	100	71.322	ENSSFOG00015020295	gfi1	100	71.285	Scleropages_formosus
ENSSMAG00000002782	gfi1ab	100	82.262	ENSSDUG00000022410	gfi1ab	100	82.519	Seriola_dumerili
ENSSMAG00000002782	gfi1ab	100	83.033	ENSSLDG00000020163	gfi1ab	100	83.290	Seriola_lalandi_dorsalis
ENSSMAG00000002782	gfi1ab	79	87.544	ENSSPAG00000009140	gfi1ab	99	87.857	Stegastes_partitus
ENSSMAG00000002782	gfi1ab	100	63.033	ENSSSCG00000006902	GFI1	100	63.915	Sus_scrofa
ENSSMAG00000002782	gfi1ab	86	65.896	ENSTGUG00000006060	GFI1	99	66.282	Taeniopygia_guttata
ENSSMAG00000002782	gfi1ab	100	76.786	ENSTRUG00000000415	gfi1ab	100	76.786	Takifugu_rubripes
ENSSMAG00000002782	gfi1ab	100	73.028	ENSTNIG00000000651	gfi1ab	97	73.791	Tetraodon_nigroviridis
ENSSMAG00000002782	gfi1ab	100	62.911	ENSTTRG00000000082	GFI1	100	63.380	Tursiops_truncatus
ENSSMAG00000002782	gfi1ab	100	63.592	ENSUAMG00000021124	GFI1	91	64.303	Ursus_americanus
ENSSMAG00000002782	gfi1ab	100	63.819	ENSXETG00000023006	gfi1	98	64.322	Xenopus_tropicalis
ENSSMAG00000002782	gfi1ab	86	55.301	ENSXMAG00000009274	GFI1	70	56.374	Xiphophorus_maculatus
ENSSMAG00000002782	gfi1ab	100	78.880	ENSXMAG00000010523	gfi1ab	100	78.880	Xiphophorus_maculatus