EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000002798 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 3820 bases
Position: chr19:4991571-4995390
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000004501	zf-C2H2	PF00096.26	8e-20	1	4
ENSSMAP00000004501	zf-C2H2	PF00096.26	8e-20	2	4
ENSSMAP00000004501	zf-C2H2	PF00096.26	8e-20	3	4
ENSSMAP00000004501	zf-C2H2	PF00096.26	8e-20	4	4
ENSSMAP00000004490	zf-C2H2	PF00096.26	1.5e-19	1	4
ENSSMAP00000004490	zf-C2H2	PF00096.26	1.5e-19	2	4
ENSSMAP00000004490	zf-C2H2	PF00096.26	1.5e-19	3	4
ENSSMAP00000004490	zf-C2H2	PF00096.26	1.5e-19	4	4
ENSSMAP00000004524	zf-C2H2	PF00096.26	1.5e-19	1	4
ENSSMAP00000004524	zf-C2H2	PF00096.26	1.5e-19	2	4
ENSSMAP00000004524	zf-C2H2	PF00096.26	1.5e-19	3	4
ENSSMAP00000004524	zf-C2H2	PF00096.26	1.5e-19	4	4
ENSSMAP00000004501	zf-met	PF12874.7	0.0003	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000004561	-	1239	-	ENSSMAP00000004490	312 (aa)	-	A0A2U9CPI6
ENSSMAT00000004595	-	1808	-	ENSSMAP00000004524	312 (aa)	-	A0A2U9CPI6
ENSSMAT00000004572	-	1125	-	ENSSMAP00000004501	274 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000002798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000002798's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000002798	-	56	41.284	ENSSMAG00000005076	-	90	41.284
ENSSMAG00000002798	-	99	37.736	ENSSMAG00000019207	scrt1b	95	37.736
ENSSMAG00000002798	-	68	43.269	ENSSMAG00000007396	-	79	43.269
ENSSMAG00000002798	-	67	38.710	ENSSMAG00000015041	si:dkey-7i4.5	86	38.710
ENSSMAG00000002798	-	55	40.816	ENSSMAG00000007561	znf236	51	40.816
ENSSMAG00000002798	-	65	41.304	ENSSMAG00000006825	-	95	41.304
ENSSMAG00000002798	-	68	41.667	ENSSMAG00000021271	-	57	41.667
ENSSMAG00000002798	-	72	40.741	ENSSMAG00000015347	-	82	40.741
ENSSMAG00000002798	-	54	42.254	ENSSMAG00000009609	-	89	47.368
ENSSMAG00000002798	-	64	41.111	ENSSMAG00000013663	-	86	47.436
ENSSMAG00000002798	-	61	44.048	ENSSMAG00000005081	-	58	44.048
ENSSMAG00000002798	-	73	40.952	ENSSMAG00000004252	-	89	40.952
ENSSMAG00000002798	-	63	42.045	ENSSMAG00000015849	znf319b	83	42.045
ENSSMAG00000002798	-	70	42.045	ENSSMAG00000002391	ZNF319	87	42.045

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000002798	-	51	65.493	ENSAMEG00000013858	-	74	65.493	Ailuropoda_melanoleuca
ENSSMAG00000002798	-	98	61.538	ENSAPEG00000023870	gfi1ab	99	61.538	Amphiprion_percula
ENSSMAG00000002798	-	98	41.379	ENSATEG00000009167	gfi1ab	89	41.379	Anabas_testudineus
ENSSMAG00000002798	-	98	39.655	ENSAMXG00000006669	GFI1	100	39.655	Astyanax_mexicanus
ENSSMAG00000002798	-	99	48.589	ENSAMXG00000015228	-	97	48.589	Astyanax_mexicanus
ENSSMAG00000002798	-	98	77.876	ENSCVAG00000011828	gfi1ab	100	77.876	Cyprinodon_variegatus
ENSSMAG00000002798	-	98	43.353	ENSELUG00000006948	-	99	43.966	Esox_lucius
ENSSMAG00000002798	-	99	63.051	ENSGAFG00000014303	-	91	63.051	Gambusia_affinis
ENSSMAG00000002798	-	98	41.379	ENSHCOG00000019555	GFI1	100	41.379	Hippocampus_comes
ENSSMAG00000002798	-	98	47.484	ENSIPUG00000021407	-	96	48.428	Ictalurus_punctatus
ENSSMAG00000002798	-	50	66.429	ENSOANG00000022289	-	77	64.583	Ornithorhynchus_anatinus
ENSSMAG00000002798	-	98	41.379	ENSPREG00000007997	GFI1	100	41.379	Poecilia_reticulata
ENSSMAG00000002798	-	96	51.495	ENSPNAG00000014299	-	97	51.495	Pygocentrus_nattereri
ENSSMAG00000002798	-	99	48.048	ENSSFOG00015008114	-	99	48.048	Scleropages_formosus
ENSSMAG00000002798	-	98	41.379	ENSSLDG00000020163	gfi1ab	100	41.379	Seriola_lalandi_dorsalis
ENSSMAG00000002798	-	98	77.876	ENSTRUG00000000415	gfi1ab	100	77.876	Takifugu_rubripes
ENSSMAG00000002798	-	98	45.652	ENSXCOG00000013213	-	99	45.652	Xiphophorus_couchianus