EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000002883 (Gene tree)
Gene ID: -
Gene Symbol: gpatch1
Alias: im:7135982|wu:fc11h11|wu:fj99h08
Full Name: G patch domain containing 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 21070 bases
Position: chr5:434705-455774
Accession: ZDB-GENE-040914-65
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000004650	DUF1604	PF07713.13	9.9e-36	1	1
ENSSMAP00000004713	DUF1604	PF07713.13	1e-35	1	1
ENSSMAP00000004677	DUF1604	PF07713.13	1e-35	1	1
ENSSMAP00000004650	G-patch	PF01585.23	1e-07	1	1
ENSSMAP00000004713	G-patch	PF01585.23	1.1e-07	1	1
ENSSMAP00000004677	G-patch	PF01585.23	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000004748	-	3349	-	ENSSMAP00000004677	1002 (aa)	-	-
ENSSMAT00000004723	-	3504	-	ENSSMAP00000004650	976 (aa)	-	-
ENSSMAT00000004785	-	3343	-	ENSSMAP00000004713	1000 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000002883's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000002883's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000002883	gpatch1	93	47.340	ENSG00000076650	GPATCH1	81	69.231	Homo_sapiens
ENSSMAG00000002883	gpatch1	93	47.363	ENSAMEG00000015575	GPATCH1	99	44.683	Ailuropoda_melanoleuca
ENSSMAG00000002883	gpatch1	89	86.413	ENSAOCG00000006668	gpatch1	100	64.559	Amphiprion_ocellaris
ENSSMAG00000002883	gpatch1	100	67.285	ENSAPEG00000000026	gpatch1	100	65.896	Amphiprion_percula
ENSSMAG00000002883	gpatch1	100	65.797	ENSATEG00000014494	gpatch1	100	67.755	Anabas_testudineus
ENSSMAG00000002883	gpatch1	94	43.274	ENSAPLG00000007584	GPATCH1	82	52.608	Anas_platyrhynchos
ENSSMAG00000002883	gpatch1	93	47.403	ENSANAG00000027002	GPATCH1	99	45.117	Aotus_nancymaae
ENSSMAG00000002883	gpatch1	89	70.757	ENSACLG00000024740	gpatch1	83	69.931	Astatotilapia_calliptera
ENSSMAG00000002883	gpatch1	95	53.229	ENSAMXG00000020177	gpatch1	98	53.319	Astyanax_mexicanus
ENSSMAG00000002883	gpatch1	93	47.812	ENSBTAG00000000721	GPATCH1	81	49.268	Bos_taurus
ENSSMAG00000002883	gpatch1	57	34.000	WBGene00011109	R07E5.1	61	34.000	Caenorhabditis_elegans
ENSSMAG00000002883	gpatch1	93	47.294	ENSCJAG00000000684	GPATCH1	99	45.384	Callithrix_jacchus
ENSSMAG00000002883	gpatch1	93	48.060	ENSCAFG00000007457	GPATCH1	68	49.267	Canis_familiaris
ENSSMAG00000002883	gpatch1	93	48.060	ENSCAFG00020019731	GPATCH1	81	49.267	Canis_lupus_dingo
ENSSMAG00000002883	gpatch1	93	47.970	ENSCHIG00000019626	GPATCH1	83	50.432	Capra_hircus
ENSSMAG00000002883	gpatch1	90	45.928	ENSCAPG00000008827	GPATCH1	99	43.952	Cavia_aperea
ENSSMAG00000002883	gpatch1	85	48.399	ENSCPOG00000024477	GPATCH1	99	44.639	Cavia_porcellus
ENSSMAG00000002883	gpatch1	93	47.403	ENSCCAG00000024676	GPATCH1	99	44.980	Cebus_capucinus
ENSSMAG00000002883	gpatch1	93	47.798	ENSCATG00000043637	GPATCH1	81	70.192	Cercocebus_atys
ENSSMAG00000002883	gpatch1	94	45.376	ENSCLAG00000003395	-	82	48.416	Chinchilla_lanigera
ENSSMAG00000002883	gpatch1	93	46.429	ENSCSAG00000004743	GPATCH1	81	48.960	Chlorocebus_sabaeus
ENSSMAG00000002883	gpatch1	86	40.371	ENSCHOG00000012865	GPATCH1	80	42.632	Choloepus_hoffmanni
ENSSMAG00000002883	gpatch1	82	52.187	ENSCPBG00000000666	GPATCH1	91	54.864	Chrysemys_picta_bellii
ENSSMAG00000002883	gpatch1	78	37.021	ENSCING00000012518	-	70	43.972	Ciona_intestinalis
ENSSMAG00000002883	gpatch1	78	48.966	ENSCANG00000012540	GPATCH1	78	54.274	Colobus_angolensis_palliatus
ENSSMAG00000002883	gpatch1	90	47.725	ENSCGRG00001016736	Gpatch1	80	49.682	Cricetulus_griseus_chok1gshd
ENSSMAG00000002883	gpatch1	82	42.086	ENSCGRG00000005069	Gpatch1	77	42.675	Cricetulus_griseus_crigri
ENSSMAG00000002883	gpatch1	89	63.441	ENSCSEG00000019456	-	88	72.566	Cynoglossus_semilaevis
ENSSMAG00000002883	gpatch1	93	54.795	ENSDARG00000033418	gpatch1	99	52.738	Danio_rerio
ENSSMAG00000002883	gpatch1	93	48.754	ENSDNOG00000005291	GPATCH1	84	50.124	Dasypus_novemcinctus
ENSSMAG00000002883	gpatch1	93	45.000	ENSDORG00000012546	Gpatch1	95	44.304	Dipodomys_ordii
ENSSMAG00000002883	gpatch1	81	31.235	FBgn0036386	CG8833	67	31.208	Drosophila_melanogaster
ENSSMAG00000002883	gpatch1	93	45.603	ENSETEG00000003626	GPATCH1	72	51.111	Echinops_telfairi
ENSSMAG00000002883	gpatch1	90	40.326	ENSEBUG00000011286	gpatch1	80	40.535	Eptatretus_burgeri
ENSSMAG00000002883	gpatch1	93	46.970	ENSEASG00005021162	GPATCH1	88	49.938	Equus_asinus_asinus
ENSSMAG00000002883	gpatch1	93	47.255	ENSECAG00000022743	GPATCH1	79	49.694	Equus_caballus
ENSSMAG00000002883	gpatch1	70	51.485	ENSEEUG00000012925	GPATCH1	66	50.761	Erinaceus_europaeus
ENSSMAG00000002883	gpatch1	99	51.798	ENSELUG00000018195	gpatch1	99	51.500	Esox_lucius
ENSSMAG00000002883	gpatch1	93	46.129	ENSFCAG00000014917	GPATCH1	81	48.348	Felis_catus
ENSSMAG00000002883	gpatch1	93	46.652	ENSFALG00000007821	GPATCH1	96	51.957	Ficedula_albicollis
ENSSMAG00000002883	gpatch1	90	47.309	ENSFDAG00000003871	GPATCH1	82	49.362	Fukomys_damarensis
ENSSMAG00000002883	gpatch1	88	62.243	ENSGMOG00000003830	gpatch1	96	62.014	Gadus_morhua
ENSSMAG00000002883	gpatch1	97	45.510	ENSGALG00000004839	GPATCH1	93	45.996	Gallus_gallus
ENSSMAG00000002883	gpatch1	90	78.298	ENSGACG00000017544	gpatch1	95	77.447	Gasterosteus_aculeatus
ENSSMAG00000002883	gpatch1	93	46.121	ENSGAGG00000010067	GPATCH1	96	54.525	Gopherus_agassizii
ENSSMAG00000002883	gpatch1	90	46.592	ENSGGOG00000010862	GPATCH1	99	44.724	Gorilla_gorilla
ENSSMAG00000002883	gpatch1	100	65.916	ENSHBUG00000023462	gpatch1	100	66.210	Haplochromis_burtoni
ENSSMAG00000002883	gpatch1	93	46.587	ENSHGLG00000009334	GPATCH1	99	45.010	Heterocephalus_glaber_female
ENSSMAG00000002883	gpatch1	93	46.479	ENSHGLG00100018074	GPATCH1	99	44.912	Heterocephalus_glaber_male
ENSSMAG00000002883	gpatch1	99	52.885	ENSIPUG00000014977	gpatch1	90	66.304	Ictalurus_punctatus
ENSSMAG00000002883	gpatch1	93	45.842	ENSSTOG00000003720	GPATCH1	99	44.884	Ictidomys_tridecemlineatus
ENSSMAG00000002883	gpatch1	93	47.948	ENSJJAG00000023765	Gpatch1	99	44.608	Jaculus_jaculus
ENSSMAG00000002883	gpatch1	100	63.636	ENSKMAG00000017950	gpatch1	100	63.699	Kryptolebias_marmoratus
ENSSMAG00000002883	gpatch1	96	67.427	ENSLBEG00000026527	gpatch1	91	68.617	Labrus_bergylta
ENSSMAG00000002883	gpatch1	91	48.840	ENSLACG00000008130	GPATCH1	99	56.044	Latimeria_chalumnae
ENSSMAG00000002883	gpatch1	90	52.422	ENSLOCG00000001800	gpatch1	99	49.310	Lepisosteus_oculatus
ENSSMAG00000002883	gpatch1	93	46.667	ENSLAFG00000013589	GPATCH1	81	54.881	Loxodonta_africana
ENSSMAG00000002883	gpatch1	93	46.861	ENSMFAG00000034418	GPATCH1	81	70.192	Macaca_fascicularis
ENSSMAG00000002883	gpatch1	93	46.919	ENSMMUG00000011790	GPATCH1	81	71.154	Macaca_mulatta
ENSSMAG00000002883	gpatch1	93	46.537	ENSMNEG00000045084	GPATCH1	98	57.353	Macaca_nemestrina
ENSSMAG00000002883	gpatch1	93	40.494	ENSMLEG00000043840	GPATCH1	99	40.255	Mandrillus_leucophaeus
ENSSMAG00000002883	gpatch1	89	70.413	ENSMZEG00005001926	gpatch1	84	69.585	Maylandia_zebra
ENSSMAG00000002883	gpatch1	94	45.745	ENSMGAG00000005775	GPATCH1	87	52.711	Meleagris_gallopavo
ENSSMAG00000002883	gpatch1	93	41.901	ENSMICG00000004829	GPATCH1	83	44.200	Microcebus_murinus
ENSSMAG00000002883	gpatch1	93	48.128	ENSMOCG00000000174	Gpatch1	82	49.574	Microtus_ochrogaster
ENSSMAG00000002883	gpatch1	93	63.181	ENSMMOG00000002140	gpatch1	87	65.640	Mola_mola
ENSSMAG00000002883	gpatch1	88	55.748	ENSMODG00000012226	GPATCH1	94	54.881	Monodelphis_domestica
ENSSMAG00000002883	gpatch1	100	66.634	ENSMALG00000014386	gpatch1	100	65.514	Monopterus_albus
ENSSMAG00000002883	gpatch1	96	46.130	ENSMUSG00000063808	Gpatch1	98	71.875	Mus_musculus
ENSSMAG00000002883	gpatch1	96	46.779	MGP_PahariEiJ_G0012816	Gpatch1	98	72.917	Mus_pahari
ENSSMAG00000002883	gpatch1	96	46.138	MGP_SPRETEiJ_G0030681	Gpatch1	98	72.917	Mus_spretus
ENSSMAG00000002883	gpatch1	93	48.488	ENSMPUG00000007658	GPATCH1	99	44.976	Mustela_putorius_furo
ENSSMAG00000002883	gpatch1	93	48.432	ENSMLUG00000012161	GPATCH1	99	45.882	Myotis_lucifugus
ENSSMAG00000002883	gpatch1	93	48.408	ENSNGAG00000012455	Gpatch1	99	45.123	Nannospalax_galili
ENSSMAG00000002883	gpatch1	93	47.470	ENSNLEG00000007659	GPATCH1	81	69.231	Nomascus_leucogenys
ENSSMAG00000002883	gpatch1	57	63.351	ENSMEUG00000015174	GPATCH1	60	63.830	Notamacropus_eugenii
ENSSMAG00000002883	gpatch1	93	46.502	ENSODEG00000007103	GPATCH1	81	48.659	Octodon_degus
ENSSMAG00000002883	gpatch1	100	65.256	ENSONIG00000003302	gpatch1	100	66.143	Oreochromis_niloticus
ENSSMAG00000002883	gpatch1	99	47.151	ENSOANG00000012732	GPATCH1	82	50.428	Ornithorhynchus_anatinus
ENSSMAG00000002883	gpatch1	93	47.671	ENSOCUG00000015905	GPATCH1	81	50.062	Oryctolagus_cuniculus
ENSSMAG00000002883	gpatch1	95	63.850	ENSORLG00000018706	gpatch1	99	61.171	Oryzias_latipes
ENSSMAG00000002883	gpatch1	86	70.532	ENSOMEG00000022688	gpatch1	99	60.456	Oryzias_melastigma
ENSSMAG00000002883	gpatch1	85	48.944	ENSOGAG00000004016	GPATCH1	96	49.817	Otolemur_garnettii
ENSSMAG00000002883	gpatch1	93	46.753	ENSOARG00000004365	GPATCH1	81	49.571	Ovis_aries
ENSSMAG00000002883	gpatch1	93	47.231	ENSPPAG00000020990	GPATCH1	81	68.571	Pan_paniscus
ENSSMAG00000002883	gpatch1	93	47.261	ENSPPRG00000017245	GPATCH1	81	48.470	Panthera_pardus
ENSSMAG00000002883	gpatch1	93	47.097	ENSPTIG00000019649	GPATCH1	81	49.204	Panthera_tigris_altaica
ENSSMAG00000002883	gpatch1	93	47.123	ENSPTRG00000010803	GPATCH1	81	69.231	Pan_troglodytes
ENSSMAG00000002883	gpatch1	93	47.476	ENSPANG00000012374	GPATCH1	81	70.192	Papio_anubis
ENSSMAG00000002883	gpatch1	85	54.567	ENSPKIG00000020745	gpatch1	77	55.394	Paramormyrops_kingsleyae
ENSSMAG00000002883	gpatch1	95	47.346	ENSPSIG00000013433	GPATCH1	97	54.783	Pelodiscus_sinensis
ENSSMAG00000002883	gpatch1	93	48.172	ENSPEMG00000000636	Gpatch1	99	45.988	Peromyscus_maniculatus_bairdii
ENSSMAG00000002883	gpatch1	97	46.384	ENSPCIG00000021003	GPATCH1	80	54.440	Phascolarctos_cinereus
ENSSMAG00000002883	gpatch1	89	53.575	ENSPREG00000008264	gpatch1	97	63.147	Poecilia_reticulata
ENSSMAG00000002883	gpatch1	93	46.875	ENSPPYG00000009824	GPATCH1	99	44.868	Pongo_abelii
ENSSMAG00000002883	gpatch1	77	48.433	ENSPCAG00000005931	GPATCH1	68	51.079	Procavia_capensis
ENSSMAG00000002883	gpatch1	96	45.026	ENSPCOG00000009674	GPATCH1	87	47.708	Propithecus_coquereli
ENSSMAG00000002883	gpatch1	76	49.867	ENSPVAG00000017767	GPATCH1	74	49.800	Pteropus_vampyrus
ENSSMAG00000002883	gpatch1	89	70.252	ENSPNYG00000018189	gpatch1	93	69.988	Pundamilia_nyererei
ENSSMAG00000002883	gpatch1	94	51.606	ENSPNAG00000013187	gpatch1	100	50.339	Pygocentrus_nattereri
ENSSMAG00000002883	gpatch1	96	46.800	ENSRNOG00000011584	Gpatch1	99	45.357	Rattus_norvegicus
ENSSMAG00000002883	gpatch1	93	42.208	ENSRBIG00000034723	GPATCH1	99	41.749	Rhinopithecus_bieti
ENSSMAG00000002883	gpatch1	93	46.645	ENSRROG00000024428	GPATCH1	81	69.231	Rhinopithecus_roxellana
ENSSMAG00000002883	gpatch1	93	47.294	ENSSBOG00000034650	GPATCH1	81	48.837	Saimiri_boliviensis_boliviensis
ENSSMAG00000002883	gpatch1	93	47.562	ENSSHAG00000016016	GPATCH1	96	53.261	Sarcophilus_harrisii
ENSSMAG00000002883	gpatch1	94	52.530	ENSSFOG00015011535	gpatch1	89	52.350	Scleropages_formosus
ENSSMAG00000002883	gpatch1	100	63.678	ENSSDUG00000007444	gpatch1	99	67.278	Seriola_dumerili
ENSSMAG00000002883	gpatch1	89	73.059	ENSSLDG00000002856	gpatch1	93	73.757	Seriola_lalandi_dorsalis
ENSSMAG00000002883	gpatch1	75	51.705	ENSSARG00000004108	GPATCH1	72	51.226	Sorex_araneus
ENSSMAG00000002883	gpatch1	93	48.052	ENSSSCG00000002865	GPATCH1	84	49.327	Sus_scrofa
ENSSMAG00000002883	gpatch1	93	47.021	ENSTGUG00000009401	GPATCH1	90	53.696	Taeniopygia_guttata
ENSSMAG00000002883	gpatch1	99	63.221	ENSTRUG00000005785	-	99	58.153	Takifugu_rubripes
ENSSMAG00000002883	gpatch1	99	63.341	ENSTRUG00000025081	gpatch1	99	58.251	Takifugu_rubripes
ENSSMAG00000002883	gpatch1	77	71.767	ENSTNIG00000002554	gpatch1	94	71.490	Tetraodon_nigroviridis
ENSSMAG00000002883	gpatch1	61	49.432	ENSTBEG00000007750	-	77	48.538	Tupaia_belangeri
ENSSMAG00000002883	gpatch1	93	42.167	ENSTTRG00000012221	GPATCH1	81	43.293	Tursiops_truncatus
ENSSMAG00000002883	gpatch1	93	47.306	ENSUMAG00000014645	GPATCH1	77	72.917	Ursus_maritimus
ENSSMAG00000002883	gpatch1	82	66.474	ENSVPAG00000010313	GPATCH1	75	66.298	Vicugna_pacos
ENSSMAG00000002883	gpatch1	93	47.948	ENSVVUG00000016572	GPATCH1	81	49.020	Vulpes_vulpes
ENSSMAG00000002883	gpatch1	93	41.479	ENSXETG00000018276	gpatch1	84	45.822	Xenopus_tropicalis