EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000002904 (Gene tree)
Gene ID: -
Gene Symbol: zgc:123010
Alias: fk11h08|wu:fk11h08
Full Name: zgc:123010
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 9854 bases
Position: chr15:6729261-6739114
Accession: ZDB-GENE-051120-15
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000004748	RRM_1	PF00076.22	1.9e-17	1	1
ENSSMAP00000004800	RRM_1	PF00076.22	2e-17	1	1
ENSSMAP00000004726	RRM_1	PF00076.22	2.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000004873	-	1488	-	ENSSMAP00000004800	495 (aa)	-	-
ENSSMAT00000004821	-	4304	-	ENSSMAP00000004748	482 (aa)	-	-
ENSSMAT00000004798	-	4418	-	ENSSMAP00000004726	520 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000002904's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000002904's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000002904	zgc:123010	65	36.500	ENSSMAG00000010960	-	59	33.210
ENSSMAG00000002904	zgc:123010	99	46.400	ENSSMAG00000021096	-	97	49.617
ENSSMAG00000002904	zgc:123010	59	43.791	ENSSMAG00000008147	si:dkey-33c12.4	66	30.238

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000002904	zgc:123010	100	87.500	ENSAPOG00000019633	zgc:123010	100	87.500	Acanthochromis_polyacanthus
ENSSMAG00000002904	zgc:123010	81	31.458	ENSAPOG00000005058	si:dkey-33c12.4	66	32.230	Acanthochromis_polyacanthus
ENSSMAG00000002904	zgc:123010	54	39.594	ENSAPOG00000022403	-	59	39.437	Acanthochromis_polyacanthus
ENSSMAG00000002904	zgc:123010	77	51.471	ENSAPOG00000001034	-	84	55.182	Acanthochromis_polyacanthus
ENSSMAG00000002904	zgc:123010	71	82.955	ENSACIG00000021684	zgc:123010	89	85.070	Amphilophus_citrinellus
ENSSMAG00000002904	zgc:123010	100	87.692	ENSAOCG00000005910	zgc:123010	100	87.692	Amphiprion_ocellaris
ENSSMAG00000002904	zgc:123010	64	33.973	ENSAOCG00000020066	si:dkey-33c12.4	69	30.426	Amphiprion_ocellaris
ENSSMAG00000002904	zgc:123010	54	39.594	ENSAOCG00000000431	-	61	31.863	Amphiprion_ocellaris
ENSSMAG00000002904	zgc:123010	100	87.692	ENSAPEG00000014305	zgc:123010	100	87.935	Amphiprion_percula
ENSSMAG00000002904	zgc:123010	54	39.594	ENSAPEG00000023603	-	52	39.241	Amphiprion_percula
ENSSMAG00000002904	zgc:123010	99	50.473	ENSATEG00000022160	-	100	49.529	Anabas_testudineus
ENSSMAG00000002904	zgc:123010	100	85.769	ENSATEG00000001220	zgc:123010	100	85.769	Anabas_testudineus
ENSSMAG00000002904	zgc:123010	64	33.148	ENSATEG00000018885	si:dkey-33c12.4	58	32.905	Anabas_testudineus
ENSSMAG00000002904	zgc:123010	99	50.936	ENSACLG00000012346	-	100	51.036	Astatotilapia_calliptera
ENSSMAG00000002904	zgc:123010	50	42.286	ENSACLG00000003019	-	54	36.620	Astatotilapia_calliptera
ENSSMAG00000002904	zgc:123010	100	82.759	ENSACLG00000010188	zgc:123010	100	82.759	Astatotilapia_calliptera
ENSSMAG00000002904	zgc:123010	100	64.259	ENSAMXG00000041967	zgc:123010	100	65.314	Astyanax_mexicanus
ENSSMAG00000002904	zgc:123010	85	30.986	ENSAMXG00000010871	si:dkey-33c12.4	72	33.407	Astyanax_mexicanus
ENSSMAG00000002904	zgc:123010	69	32.500	ENSCPBG00000024454	-	63	32.719	Chrysemys_picta_bellii
ENSSMAG00000002904	zgc:123010	82	37.037	ENSCSEG00000002755	-	73	37.037	Cynoglossus_semilaevis
ENSSMAG00000002904	zgc:123010	80	80.430	ENSCSEG00000006468	zgc:123010	67	80.430	Cynoglossus_semilaevis
ENSSMAG00000002904	zgc:123010	100	81.346	ENSCVAG00000013288	zgc:123010	100	81.346	Cyprinodon_variegatus
ENSSMAG00000002904	zgc:123010	55	39.524	ENSCVAG00000004187	-	55	37.838	Cyprinodon_variegatus
ENSSMAG00000002904	zgc:123010	65	32.061	ENSCVAG00000006564	-	53	34.181	Cyprinodon_variegatus
ENSSMAG00000002904	zgc:123010	92	66.736	ENSDARG00000039082	zgc:123010	100	66.333	Danio_rerio
ENSSMAG00000002904	zgc:123010	72	33.333	ENSDARG00000057890	si:dkey-33c12.4	67	33.030	Danio_rerio
ENSSMAG00000002904	zgc:123010	59	36.449	ENSEBUG00000001368	-	55	37.888	Eptatretus_burgeri
ENSSMAG00000002904	zgc:123010	80	30.786	ENSELUG00000001633	-	69	30.786	Esox_lucius
ENSSMAG00000002904	zgc:123010	63	33.333	ENSELUG00000002009	si:dkey-33c12.4	88	36.218	Esox_lucius
ENSSMAG00000002904	zgc:123010	100	68.000	ENSELUG00000022008	zgc:123010	100	67.932	Esox_lucius
ENSSMAG00000002904	zgc:123010	100	53.333	ENSELUG00000021447	-	100	57.524	Esox_lucius
ENSSMAG00000002904	zgc:123010	100	80.000	ENSFHEG00000002306	zgc:123010	100	80.000	Fundulus_heteroclitus
ENSSMAG00000002904	zgc:123010	64	32.308	ENSFHEG00000005521	si:dkey-33c12.4	84	34.366	Fundulus_heteroclitus
ENSSMAG00000002904	zgc:123010	72	78.877	ENSGMOG00000018473	zgc:123010	100	78.877	Gadus_morhua
ENSSMAG00000002904	zgc:123010	55	30.451	ENSGMOG00000001292	-	99	31.395	Gadus_morhua
ENSSMAG00000002904	zgc:123010	62	31.818	ENSGALG00000036747	TTC31	67	32.102	Gallus_gallus
ENSSMAG00000002904	zgc:123010	50	39.205	ENSGAFG00000016594	-	58	38.028	Gambusia_affinis
ENSSMAG00000002904	zgc:123010	66	44.379	ENSGAFG00000017596	si:dkey-33c12.4	63	32.265	Gambusia_affinis
ENSSMAG00000002904	zgc:123010	100	81.538	ENSGAFG00000009373	zgc:123010	100	81.538	Gambusia_affinis
ENSSMAG00000002904	zgc:123010	63	37.171	ENSGACG00000004936	-	97	36.308	Gasterosteus_aculeatus
ENSSMAG00000002904	zgc:123010	72	88.204	ENSGACG00000007620	zgc:123010	100	88.204	Gasterosteus_aculeatus
ENSSMAG00000002904	zgc:123010	99	50.657	ENSHBUG00000016720	-	100	51.509	Haplochromis_burtoni
ENSSMAG00000002904	zgc:123010	63	42.208	ENSHBUG00000010735	si:dkey-33c12.4	55	31.551	Haplochromis_burtoni
ENSSMAG00000002904	zgc:123010	89	31.179	ENSIPUG00000005998	si:dkey-33c12.4	66	33.729	Ictalurus_punctatus
ENSSMAG00000002904	zgc:123010	50	34.884	ENSKMAG00000006468	-	64	32.398	Kryptolebias_marmoratus
ENSSMAG00000002904	zgc:123010	64	32.337	ENSKMAG00000016610	si:dkey-33c12.4	54	32.692	Kryptolebias_marmoratus
ENSSMAG00000002904	zgc:123010	100	83.301	ENSKMAG00000021350	zgc:123010	100	83.301	Kryptolebias_marmoratus
ENSSMAG00000002904	zgc:123010	100	85.385	ENSLBEG00000023984	zgc:123010	100	85.385	Labrus_bergylta
ENSSMAG00000002904	zgc:123010	63	31.956	ENSLBEG00000021088	-	68	31.696	Labrus_bergylta
ENSSMAG00000002904	zgc:123010	50	33.445	ENSLBEG00000017203	-	62	33.067	Labrus_bergylta
ENSSMAG00000002904	zgc:123010	99	53.244	ENSLBEG00000013518	-	100	52.762	Labrus_bergylta
ENSSMAG00000002904	zgc:123010	68	37.500	ENSLBEG00000028046	-	55	37.500	Labrus_bergylta
ENSSMAG00000002904	zgc:123010	91	50.661	ENSLACG00000009001	zgc:123010	98	52.000	Latimeria_chalumnae
ENSSMAG00000002904	zgc:123010	97	30.427	ENSLACG00000004602	-	75	35.116	Latimeria_chalumnae
ENSSMAG00000002904	zgc:123010	100	58.365	ENSLOCG00000008967	zgc:123010	100	59.886	Lepisosteus_oculatus
ENSSMAG00000002904	zgc:123010	95	31.844	ENSLOCG00000001861	-	74	32.649	Lepisosteus_oculatus
ENSSMAG00000002904	zgc:123010	74	78.667	ENSMAMG00000001145	zgc:123010	89	80.593	Mastacembelus_armatus
ENSSMAG00000002904	zgc:123010	50	40.571	ENSMAMG00000004311	-	62	37.037	Mastacembelus_armatus
ENSSMAG00000002904	zgc:123010	71	60.055	ENSMAMG00000002460	-	86	61.281	Mastacembelus_armatus
ENSSMAG00000002904	zgc:123010	71	60.055	ENSMAMG00000002377	-	82	61.281	Mastacembelus_armatus
ENSSMAG00000002904	zgc:123010	64	33.425	ENSMAMG00000000111	si:dkey-33c12.4	57	33.071	Mastacembelus_armatus
ENSSMAG00000002904	zgc:123010	67	58.896	ENSMAMG00000003394	-	91	57.522	Mastacembelus_armatus
ENSSMAG00000002904	zgc:123010	67	60.125	ENSMAMG00000003439	-	97	57.584	Mastacembelus_armatus
ENSSMAG00000002904	zgc:123010	76	35.484	ENSMZEG00005000585	-	65	31.078	Maylandia_zebra
ENSSMAG00000002904	zgc:123010	78	53.659	ENSMZEG00005014740	-	99	54.926	Maylandia_zebra
ENSSMAG00000002904	zgc:123010	100	82.759	ENSMZEG00005027733	zgc:123010	100	82.759	Maylandia_zebra
ENSSMAG00000002904	zgc:123010	96	75.000	ENSMMOG00000010544	zgc:123010	100	78.981	Mola_mola
ENSSMAG00000002904	zgc:123010	70	52.044	ENSMMOG00000017955	-	86	53.315	Mola_mola
ENSSMAG00000002904	zgc:123010	61	39.437	ENSMALG00000003167	-	50	39.437	Monopterus_albus
ENSSMAG00000002904	zgc:123010	64	33.425	ENSMALG00000002265	si:dkey-33c12.4	60	32.821	Monopterus_albus
ENSSMAG00000002904	zgc:123010	100	85.577	ENSMALG00000017698	zgc:123010	100	85.577	Monopterus_albus
ENSSMAG00000002904	zgc:123010	100	67.717	ENSNBRG00000021157	zgc:123010	100	70.757	Neolamprologus_brichardi
ENSSMAG00000002904	zgc:123010	94	81.174	ENSONIG00000018353	zgc:123010	100	81.174	Oreochromis_niloticus
ENSSMAG00000002904	zgc:123010	61	58.416	ENSONIG00000000297	-	100	58.416	Oreochromis_niloticus
ENSSMAG00000002904	zgc:123010	63	36.156	ENSONIG00000012263	-	99	36.449	Oreochromis_niloticus
ENSSMAG00000002904	zgc:123010	50	42.614	ENSONIG00000007538	-	91	40.249	Oreochromis_niloticus
ENSSMAG00000002904	zgc:123010	79	30.476	ENSORLG00000029651	si:dkey-33c12.4	60	30.130	Oryzias_latipes
ENSSMAG00000002904	zgc:123010	76	34.177	ENSORLG00000030385	-	69	31.773	Oryzias_latipes
ENSSMAG00000002904	zgc:123010	92	76.360	ENSORLG00000007675	zgc:123010	100	76.360	Oryzias_latipes
ENSSMAG00000002904	zgc:123010	92	76.050	ENSORLG00020003457	zgc:123010	100	76.050	Oryzias_latipes_hni
ENSSMAG00000002904	zgc:123010	87	32.653	ENSORLG00020008750	si:dkey-33c12.4	59	30.607	Oryzias_latipes_hni
ENSSMAG00000002904	zgc:123010	100	78.077	ENSORLG00015008373	zgc:123010	100	78.077	Oryzias_latipes_hsok
ENSSMAG00000002904	zgc:123010	76	30.064	ENSORLG00015008400	-	67	31.742	Oryzias_latipes_hsok
ENSSMAG00000002904	zgc:123010	84	35.897	ENSOMEG00000009428	-	61	35.897	Oryzias_melastigma
ENSSMAG00000002904	zgc:123010	100	80.769	ENSOMEG00000003408	zgc:123010	100	80.769	Oryzias_melastigma
ENSSMAG00000002904	zgc:123010	63	31.073	ENSOMEG00000008913	-	52	32.203	Oryzias_melastigma
ENSSMAG00000002904	zgc:123010	100	55.722	ENSPKIG00000015521	zgc:123010	99	57.741	Paramormyrops_kingsleyae
ENSSMAG00000002904	zgc:123010	93	31.081	ENSPKIG00000011819	-	72	32.427	Paramormyrops_kingsleyae
ENSSMAG00000002904	zgc:123010	84	65.550	ENSPMGG00000020251	zgc:123010	99	62.208	Periophthalmus_magnuspinnatus
ENSSMAG00000002904	zgc:123010	51	42.213	ENSPMAG00000009352	-	82	42.213	Petromyzon_marinus
ENSSMAG00000002904	zgc:123010	60	43.299	ENSPMAG00000004544	zgc:123010	100	44.718	Petromyzon_marinus
ENSSMAG00000002904	zgc:123010	50	39.205	ENSPFOG00000017092	-	70	36.486	Poecilia_formosa
ENSSMAG00000002904	zgc:123010	100	81.538	ENSPFOG00000001073	zgc:123010	100	81.538	Poecilia_formosa
ENSSMAG00000002904	zgc:123010	100	81.538	ENSPLAG00000007711	zgc:123010	100	81.538	Poecilia_latipinna
ENSSMAG00000002904	zgc:123010	100	81.346	ENSPMEG00000005092	zgc:123010	100	81.346	Poecilia_mexicana
ENSSMAG00000002904	zgc:123010	50	39.773	ENSPMEG00000009905	-	60	36.486	Poecilia_mexicana
ENSSMAG00000002904	zgc:123010	94	58.278	ENSPREG00000019587	zgc:123010	79	74.930	Poecilia_reticulata
ENSSMAG00000002904	zgc:123010	50	39.773	ENSPREG00000016861	-	59	36.486	Poecilia_reticulata
ENSSMAG00000002904	zgc:123010	100	82.726	ENSPNYG00000007893	zgc:123010	100	82.726	Pundamilia_nyererei
ENSSMAG00000002904	zgc:123010	76	35.484	ENSPNYG00000001047	-	85	31.078	Pundamilia_nyererei
ENSSMAG00000002904	zgc:123010	71	53.281	ENSPNYG00000023304	-	87	54.255	Pundamilia_nyererei
ENSSMAG00000002904	zgc:123010	74	35.279	ENSPNAG00000018386	si:dkey-33c12.4	63	33.002	Pygocentrus_nattereri
ENSSMAG00000002904	zgc:123010	100	67.557	ENSPNAG00000007579	zgc:123010	100	67.932	Pygocentrus_nattereri
ENSSMAG00000002904	zgc:123010	100	57.974	ENSSFOG00015021394	zgc:123010	99	58.167	Scleropages_formosus
ENSSMAG00000002904	zgc:123010	67	32.374	ENSSFOG00015009199	-	79	32.121	Scleropages_formosus
ENSSMAG00000002904	zgc:123010	66	37.249	ENSSFOG00015005186	-	66	34.390	Scleropages_formosus
ENSSMAG00000002904	zgc:123010	100	90.385	ENSSDUG00000008651	zgc:123010	100	90.385	Seriola_dumerili
ENSSMAG00000002904	zgc:123010	99	52.820	ENSSDUG00000014026	-	100	55.577	Seriola_dumerili
ENSSMAG00000002904	zgc:123010	75	31.084	ENSSDUG00000003213	si:dkey-33c12.4	71	30.155	Seriola_dumerili
ENSSMAG00000002904	zgc:123010	50	40.000	ENSSLDG00000012846	-	50	37.500	Seriola_lalandi_dorsalis
ENSSMAG00000002904	zgc:123010	74	31.401	ENSSLDG00000009448	si:dkey-33c12.4	61	31.401	Seriola_lalandi_dorsalis
ENSSMAG00000002904	zgc:123010	100	90.192	ENSSLDG00000019386	zgc:123010	100	90.192	Seriola_lalandi_dorsalis
ENSSMAG00000002904	zgc:123010	100	88.269	ENSSPAG00000013621	zgc:123010	100	88.269	Stegastes_partitus
ENSSMAG00000002904	zgc:123010	69	36.250	ENSSPAG00000004843	-	52	36.531	Stegastes_partitus
ENSSMAG00000002904	zgc:123010	64	34.530	ENSSPAG00000022577	-	53	34.530	Stegastes_partitus
ENSSMAG00000002904	zgc:123010	100	73.846	ENSTRUG00000024824	zgc:123010	100	73.846	Takifugu_rubripes
ENSSMAG00000002904	zgc:123010	72	30.548	ENSTRUG00000000057	-	68	30.790	Takifugu_rubripes
ENSSMAG00000002904	zgc:123010	62	79.530	ENSTNIG00000001303	zgc:123010	100	75.684	Tetraodon_nigroviridis
ENSSMAG00000002904	zgc:123010	63	37.987	ENSTNIG00000010542	-	99	37.160	Tetraodon_nigroviridis
ENSSMAG00000002904	zgc:123010	50	37.190	ENSTNIG00000001154	-	98	37.190	Tetraodon_nigroviridis
ENSSMAG00000002904	zgc:123010	62	51.007	ENSXETG00000033896	-	100	51.712	Xenopus_tropicalis
ENSSMAG00000002904	zgc:123010	71	75.806	ENSXCOG00000012281	zgc:123010	83	77.929	Xiphophorus_couchianus
ENSSMAG00000002904	zgc:123010	59	45.752	ENSXMAG00000018535	si:dkey-33c12.4	63	31.787	Xiphophorus_maculatus
ENSSMAG00000002904	zgc:123010	100	80.230	ENSXMAG00000002598	zgc:123010	100	80.422	Xiphophorus_maculatus