EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000002969 (Gene tree)
Gene ID: -
Gene Symbol: rab18a
Alias: fc62e07|wu:fc62e07|zgc:77145
Full Name: RAB18A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 10089 bases
Position: chr21:9411467-9421555
Accession: ZDB-GENE-030131-3980
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000004822	MMR_HSR1	PF01926.23	1.5e-07	1	1
ENSSMAP00000004837	MMR_HSR1	PF01926.23	4.2e-07	1	1
ENSSMAP00000004851	MMR_HSR1	PF01926.23	7.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000004924	-	546	-	ENSSMAP00000004851	181 (aa)	-	-
ENSSMAT00000004895	-	2851	-	ENSSMAP00000004822	205 (aa)	-	A0A2U9CXS0
ENSSMAT00000004910	-	2784	-	ENSSMAP00000004837	242 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000002969's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000002969's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000002969	rab18a	71	42.568	ENSSMAG00000002229	zgc:101559	62	42.857
ENSSMAG00000002969	rab18a	92	34.715	ENSSMAG00000001414	-	71	37.725
ENSSMAG00000002969	rab18a	81	32.530	ENSSMAG00000008745	hrasb	87	32.530
ENSSMAG00000002969	rab18a	50	31.452	ENSSMAG00000008394	arl4d	61	31.452
ENSSMAG00000002969	rab18a	80	38.323	ENSSMAG00000011579	RAB7A	81	38.323
ENSSMAG00000002969	rab18a	82	44.970	ENSSMAG00000004922	rab11bb	77	44.970
ENSSMAG00000002969	rab18a	88	38.674	ENSSMAG00000017205	-	85	38.674
ENSSMAG00000002969	rab18a	77	32.099	ENSSMAG00000013303	rheb	85	32.099
ENSSMAG00000002969	rab18a	93	44.845	ENSSMAG00000009201	rab1ba	83	49.701
ENSSMAG00000002969	rab18a	82	42.012	ENSSMAG00000016183	rab25b	79	42.012
ENSSMAG00000002969	rab18a	93	37.245	ENSSMAG00000013733	rab33a	54	42.857
ENSSMAG00000002969	rab18a	83	34.682	ENSSMAG00000004806	si:ch73-116o1.2	83	34.682
ENSSMAG00000002969	rab18a	79	30.488	ENSSMAG00000014329	si:cabz01085950.1	81	30.488
ENSSMAG00000002969	rab18a	84	39.306	ENSSMAG00000000335	rab6bb	81	39.306
ENSSMAG00000002969	rab18a	50	30.769	ENSSMAG00000011361	arf5	72	30.769
ENSSMAG00000002969	rab18a	79	31.325	ENSSMAG00000000032	dnajc27	61	31.325
ENSSMAG00000002969	rab18a	77	32.099	ENSSMAG00000001964	rhebl1	85	32.099
ENSSMAG00000002969	rab18a	80	39.394	ENSSMAG00000020311	rab42a	76	39.394
ENSSMAG00000002969	rab18a	80	39.634	ENSSMAG00000005651	-	77	39.634
ENSSMAG00000002969	rab18a	96	37.864	ENSSMAG00000009722	rab25a	80	42.012
ENSSMAG00000002969	rab18a	86	49.171	ENSSMAG00000001002	rab2a	84	49.171
ENSSMAG00000002969	rab18a	80	36.905	ENSSMAG00000014078	RAB9A	84	36.905
ENSSMAG00000002969	rab18a	80	32.317	ENSSMAG00000007370	kras	88	31.707
ENSSMAG00000002969	rab18a	83	37.209	ENSSMAG00000001953	rab39bb	81	37.209
ENSSMAG00000002969	rab18a	83	32.759	ENSSMAG00000020045	rab36	66	32.759
ENSSMAG00000002969	rab18a	84	43.605	ENSSMAG00000011769	si:dkey-16l2.16	80	43.182
ENSSMAG00000002969	rab18a	81	40.476	ENSSMAG00000010140	rab22a	89	40.476
ENSSMAG00000002969	rab18a	71	38.816	ENSSMAG00000012178	-	63	38.816
ENSSMAG00000002969	rab18a	80	46.341	ENSSMAG00000018454	-	76	46.341
ENSSMAG00000002969	rab18a	99	83.415	ENSSMAG00000011814	rab18b	93	84.896
ENSSMAG00000002969	rab18a	79	51.852	ENSSMAG00000017528	rab1ab	80	51.852
ENSSMAG00000002969	rab18a	80	50.000	ENSSMAG00000002500	rab30	81	50.000
ENSSMAG00000002969	rab18a	94	39.378	ENSSMAG00000007323	rab5c	86	40.314
ENSSMAG00000002969	rab18a	80	48.171	ENSSMAG00000003166	rab14	76	48.171
ENSSMAG00000002969	rab18a	87	31.285	ENSSMAG00000014984	rras	82	34.756
ENSSMAG00000002969	rab18a	79	50.617	ENSSMAG00000004416	-	75	50.617
ENSSMAG00000002969	rab18a	79	37.349	ENSSMAG00000006709	rab9b	80	37.349
ENSSMAG00000002969	rab18a	81	36.207	ENSSMAG00000017426	rab9a	81	36.207
ENSSMAG00000002969	rab18a	79	43.558	ENSSMAG00000019773	rab15	76	43.558
ENSSMAG00000002969	rab18a	77	31.677	ENSSMAG00000019926	rab34b	68	31.646
ENSSMAG00000002969	rab18a	82	44.379	ENSSMAG00000018613	-	77	44.379
ENSSMAG00000002969	rab18a	80	46.341	ENSSMAG00000016376	-	82	46.341
ENSSMAG00000002969	rab18a	88	37.158	ENSSMAG00000015774	rab41	84	37.158
ENSSMAG00000002969	rab18a	91	39.683	ENSSMAG00000009229	rab5aa	89	39.683
ENSSMAG00000002969	rab18a	82	44.379	ENSSMAG00000004133	rab11a	78	44.379
ENSSMAG00000002969	rab18a	79	45.062	ENSSMAG00000016206	rab11al	75	45.062
ENSSMAG00000002969	rab18a	88	32.609	ENSSMAG00000004343	rab34a	68	32.609
ENSSMAG00000002969	rab18a	83	36.628	ENSSMAG00000006341	rab23	75	37.013
ENSSMAG00000002969	rab18a	85	38.202	ENSSMAG00000013945	si:dkey-13a21.4	84	38.202
ENSSMAG00000002969	rab18a	80	49.390	ENSSMAG00000000660	rab35b	81	49.390
ENSSMAG00000002969	rab18a	79	48.171	ENSSMAG00000012678	rab12	67	48.171
ENSSMAG00000002969	rab18a	92	36.979	ENSSMAG00000015955	rab33ba	79	36.757
ENSSMAG00000002969	rab18a	86	43.258	ENSSMAG00000002569	-	86	43.258
ENSSMAG00000002969	rab18a	86	34.637	ENSSMAG00000004606	rabl2	78	34.637
ENSSMAG00000002969	rab18a	95	45.918	ENSSMAG00000021049	-	82	50.299

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000002969	rab18a	100	94.634	ENSAPOG00000010760	rab18a	94	94.819	Acanthochromis_polyacanthus
ENSSMAG00000002969	rab18a	100	92.818	ENSACIG00000009617	rab18a	93	92.899	Amphilophus_citrinellus
ENSSMAG00000002969	rab18a	100	95.122	ENSAOCG00000016233	rab18a	94	95.337	Amphiprion_ocellaris
ENSSMAG00000002969	rab18a	100	95.122	ENSAPEG00000005392	rab18a	94	95.337	Amphiprion_percula
ENSSMAG00000002969	rab18a	100	95.122	ENSATEG00000021911	rab18a	94	95.337	Anabas_testudineus
ENSSMAG00000002969	rab18a	100	87.317	ENSACAG00000005463	-	94	89.119	Anolis_carolinensis
ENSSMAG00000002969	rab18a	100	94.146	ENSACLG00000011484	rab18a	94	94.301	Astatotilapia_calliptera
ENSSMAG00000002969	rab18a	96	69.307	ENSCPBG00000027619	-	89	72.928	Chrysemys_picta_bellii
ENSSMAG00000002969	rab18a	100	86.473	ENSCPBG00000015839	-	93	89.062	Chrysemys_picta_bellii
ENSSMAG00000002969	rab18a	97	74.372	ENSCING00000006838	-	95	76.190	Ciona_intestinalis
ENSSMAG00000002969	rab18a	97	72.362	ENSCSAVG00000010348	-	97	73.057	Ciona_savignyi
ENSSMAG00000002969	rab18a	100	94.634	ENSCSEG00000011816	rab18a	94	94.819	Cynoglossus_semilaevis
ENSSMAG00000002969	rab18a	94	91.710	ENSCVAG00000015451	rab18a	94	91.710	Cyprinodon_variegatus
ENSSMAG00000002969	rab18a	100	83.010	ENSDARG00000055291	rab18a	92	86.316	Danio_rerio
ENSSMAG00000002969	rab18a	100	91.262	ENSELUG00000003805	rab18a	93	91.667	Esox_lucius
ENSSMAG00000002969	rab18a	94	93.264	ENSFHEG00000019455	rab18a	94	93.264	Fundulus_heteroclitus
ENSSMAG00000002969	rab18a	94	92.188	ENSGAFG00000002790	rab18a	94	92.228	Gambusia_affinis
ENSSMAG00000002969	rab18a	100	86.473	ENSGAGG00000015642	-	93	89.062	Gopherus_agassizii
ENSSMAG00000002969	rab18a	100	94.146	ENSHBUG00000001518	rab18a	94	94.301	Haplochromis_burtoni
ENSSMAG00000002969	rab18a	99	95.098	ENSLBEG00000005861	rab18a	90	95.337	Labrus_bergylta
ENSSMAG00000002969	rab18a	93	90.052	ENSLACG00000009310	rab18a	92	90.052	Latimeria_chalumnae
ENSSMAG00000002969	rab18a	100	89.806	ENSLOCG00000007491	rab18a	93	90.104	Lepisosteus_oculatus
ENSSMAG00000002969	rab18a	100	96.098	ENSMAMG00000014320	rab18a	100	96.098	Mastacembelus_armatus
ENSSMAG00000002969	rab18a	100	93.659	ENSMZEG00005017235	rab18a	94	94.301	Maylandia_zebra
ENSSMAG00000002969	rab18a	100	95.610	ENSMALG00000009813	rab18a	94	95.855	Monopterus_albus
ENSSMAG00000002969	rab18a	100	94.146	ENSNBRG00000013507	rab18a	94	94.301	Neolamprologus_brichardi
ENSSMAG00000002969	rab18a	94	93.264	ENSORLG00000004624	rab18a	94	93.264	Oryzias_latipes
ENSSMAG00000002969	rab18a	94	93.782	ENSORLG00020008333	rab18a	94	93.782	Oryzias_latipes_hni
ENSSMAG00000002969	rab18a	94	93.264	ENSORLG00015004739	rab18a	94	93.264	Oryzias_latipes_hsok
ENSSMAG00000002969	rab18a	100	93.171	ENSOMEG00000020605	rab18a	94	93.264	Oryzias_melastigma
ENSSMAG00000002969	rab18a	100	88.835	ENSPKIG00000009825	rab18a	92	92.105	Paramormyrops_kingsleyae
ENSSMAG00000002969	rab18a	100	91.707	ENSPMGG00000020409	-	94	92.228	Periophthalmus_magnuspinnatus
ENSSMAG00000002969	rab18a	94	92.708	ENSPFOG00000007571	rab18a	94	92.746	Poecilia_formosa
ENSSMAG00000002969	rab18a	94	92.708	ENSPLAG00000010104	rab18a	94	92.746	Poecilia_latipinna
ENSSMAG00000002969	rab18a	94	92.708	ENSPMEG00000013085	rab18a	94	92.746	Poecilia_mexicana
ENSSMAG00000002969	rab18a	94	92.708	ENSPREG00000005923	rab18a	78	92.746	Poecilia_reticulata
ENSSMAG00000002969	rab18a	100	94.146	ENSPNYG00000007064	rab18a	94	94.301	Pundamilia_nyererei
ENSSMAG00000002969	rab18a	99	82.178	ENSPNAG00000011548	rab18a	95	84.817	Pygocentrus_nattereri
ENSSMAG00000002969	rab18a	100	91.748	ENSSFOG00015017444	rab18a	78	92.670	Scleropages_formosus
ENSSMAG00000002969	rab18a	100	96.585	ENSSDUG00000003823	rab18a	100	96.585	Seriola_dumerili
ENSSMAG00000002969	rab18a	100	96.585	ENSSLDG00000006977	rab18a	100	96.585	Seriola_lalandi_dorsalis
ENSSMAG00000002969	rab18a	93	90.000	ENSSPUG00000017677	-	92	89.529	Sphenodon_punctatus
ENSSMAG00000002969	rab18a	100	91.220	ENSTRUG00000004984	rab18a	94	91.192	Takifugu_rubripes
ENSSMAG00000002969	rab18a	100	87.440	ENSUMAG00000015574	-	89	91.848	Ursus_maritimus
ENSSMAG00000002969	rab18a	100	87.440	ENSXETG00000004556	rab18	93	89.637	Xenopus_tropicalis
ENSSMAG00000002969	rab18a	94	92.708	ENSXMAG00000024122	rab18a	94	92.746	Xiphophorus_maculatus