EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000003084 (Gene tree)
Gene ID: -
Gene Symbol: cnot6b
Alias: zgc:171797
Full Name: CCR4-NOT transcription complex%2C subunit 6b
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 16794 bases
Position: chr13:13180346-13197139
Accession: ZDB-GENE-071004-97
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000005126	Exo_endo_phos	PF03372.23	3.4e-20	1	1
ENSSMAP00000005065	Exo_endo_phos	PF03372.23	4.1e-20	1	1
ENSSMAP00000005089	Exo_endo_phos	PF03372.23	4.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000005200	-	1653	-	ENSSMAP00000005126	550 (aa)	-	-
ENSSMAT00000005164	-	6423	-	ENSSMAP00000005089	570 (aa)	-	-
ENSSMAT00000005140	-	7453	-	ENSSMAP00000005065	559 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000003084's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000003084's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000003084	cnot6b	100	72.906	ENSSMAG00000015568	cnot6l	100	72.906

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000003084	cnot6b	100	84.615	ENSG00000113300	CNOT6	100	92.105	Homo_sapiens
ENSSMAG00000003084	cnot6b	100	97.138	ENSAPOG00000009994	cnot6b	100	97.138	Acanthochromis_polyacanthus
ENSSMAG00000003084	cnot6b	100	84.670	ENSAMEG00000000949	CNOT6	99	84.670	Ailuropoda_melanoleuca
ENSSMAG00000003084	cnot6b	100	94.454	ENSACIG00000016566	cnot6b	100	94.454	Amphilophus_citrinellus
ENSSMAG00000003084	cnot6b	100	97.138	ENSAOCG00000006893	cnot6b	100	97.138	Amphiprion_ocellaris
ENSSMAG00000003084	cnot6b	100	97.138	ENSAPEG00000016949	cnot6b	100	97.138	Amphiprion_percula
ENSSMAG00000003084	cnot6b	100	93.918	ENSATEG00000007862	cnot6b	100	93.918	Anabas_testudineus
ENSSMAG00000003084	cnot6b	100	85.331	ENSAPLG00000012715	CNOT6	99	85.689	Anas_platyrhynchos
ENSSMAG00000003084	cnot6b	100	85.510	ENSACAG00000016548	CNOT6	100	85.510	Anolis_carolinensis
ENSSMAG00000003084	cnot6b	100	84.615	ENSANAG00000030436	CNOT6	96	84.615	Aotus_nancymaae
ENSSMAG00000003084	cnot6b	100	95.886	ENSACLG00000008279	cnot6b	100	95.886	Astatotilapia_calliptera
ENSSMAG00000003084	cnot6b	100	88.730	ENSAMXG00000034694	cnot6b	100	88.730	Astyanax_mexicanus
ENSSMAG00000003084	cnot6b	100	89.624	ENSAMXG00000019140	cnot6a	100	89.624	Astyanax_mexicanus
ENSSMAG00000003084	cnot6b	100	85.152	ENSBTAG00000017362	CNOT6	100	85.152	Bos_taurus
ENSSMAG00000003084	cnot6b	100	84.794	ENSCJAG00000009795	CNOT6	100	84.794	Callithrix_jacchus
ENSSMAG00000003084	cnot6b	100	84.973	ENSCAFG00000000464	CNOT6	100	84.973	Canis_familiaris
ENSSMAG00000003084	cnot6b	100	84.973	ENSCAFG00020002441	CNOT6	100	84.973	Canis_lupus_dingo
ENSSMAG00000003084	cnot6b	100	84.615	ENSCHIG00000019100	CNOT6	100	84.615	Capra_hircus
ENSSMAG00000003084	cnot6b	100	83.363	ENSTSYG00000003982	CNOT6	100	83.363	Carlito_syrichta
ENSSMAG00000003084	cnot6b	100	80.322	ENSCPOG00000035657	CNOT6	100	80.322	Cavia_porcellus
ENSSMAG00000003084	cnot6b	100	80.143	ENSCCAG00000033670	CNOT6	100	80.143	Cebus_capucinus
ENSSMAG00000003084	cnot6b	100	84.615	ENSCATG00000042014	CNOT6	100	84.615	Cercocebus_atys
ENSSMAG00000003084	cnot6b	100	83.542	ENSCLAG00000010489	CNOT6	100	83.542	Chinchilla_lanigera
ENSSMAG00000003084	cnot6b	100	84.615	ENSCSAG00000008165	CNOT6	100	84.615	Chlorocebus_sabaeus
ENSSMAG00000003084	cnot6b	100	84.258	ENSCHOG00000009680	CNOT6	100	84.615	Choloepus_hoffmanni
ENSSMAG00000003084	cnot6b	100	85.510	ENSCPBG00000008908	CNOT6	100	85.868	Chrysemys_picta_bellii
ENSSMAG00000003084	cnot6b	100	84.794	ENSCANG00000026756	CNOT6	100	84.794	Colobus_angolensis_palliatus
ENSSMAG00000003084	cnot6b	100	83.363	ENSCGRG00001011452	Cnot6	100	83.363	Cricetulus_griseus_chok1gshd
ENSSMAG00000003084	cnot6b	100	81.216	ENSCGRG00000010407	Cnot6	100	81.216	Cricetulus_griseus_crigri
ENSSMAG00000003084	cnot6b	100	96.422	ENSCSEG00000010939	cnot6b	100	96.422	Cynoglossus_semilaevis
ENSSMAG00000003084	cnot6b	100	94.454	ENSCVAG00000010538	cnot6b	100	94.454	Cyprinodon_variegatus
ENSSMAG00000003084	cnot6b	100	89.267	ENSDARG00000008255	cnot6a	100	89.267	Danio_rerio
ENSSMAG00000003084	cnot6b	100	87.478	ENSDARG00000101072	cnot6b	100	87.478	Danio_rerio
ENSSMAG00000003084	cnot6b	100	85.510	ENSDNOG00000041644	CNOT6	100	85.510	Dasypus_novemcinctus
ENSSMAG00000003084	cnot6b	100	76.029	ENSDORG00000001708	Cnot6	100	76.029	Dipodomys_ordii
ENSSMAG00000003084	cnot6b	100	67.857	ENSETEG00000006975	CNOT6	100	67.857	Echinops_telfairi
ENSSMAG00000003084	cnot6b	100	84.794	ENSEASG00005012794	-	100	84.794	Equus_asinus_asinus
ENSSMAG00000003084	cnot6b	90	79.880	ENSEASG00005012957	-	99	79.880	Equus_asinus_asinus
ENSSMAG00000003084	cnot6b	100	80.143	ENSECAG00000012704	-	99	80.143	Equus_caballus
ENSSMAG00000003084	cnot6b	100	85.331	ENSECAG00000019325	CNOT6	100	85.331	Equus_caballus
ENSSMAG00000003084	cnot6b	100	83.900	ENSEEUG00000015382	CNOT6	100	83.900	Erinaceus_europaeus
ENSSMAG00000003084	cnot6b	100	86.583	ENSELUG00000024580	cnot6a	100	86.583	Esox_lucius
ENSSMAG00000003084	cnot6b	100	89.418	ENSELUG00000015981	cnot6b	100	89.261	Esox_lucius
ENSSMAG00000003084	cnot6b	100	85.152	ENSFCAG00000001881	CNOT6	100	85.152	Felis_catus
ENSSMAG00000003084	cnot6b	100	85.510	ENSFALG00000007699	CNOT6	100	85.868	Ficedula_albicollis
ENSSMAG00000003084	cnot6b	100	83.363	ENSFDAG00000001999	CNOT6	100	83.363	Fukomys_damarensis
ENSSMAG00000003084	cnot6b	68	93.438	ENSFHEG00000013756	cnot6b	99	93.438	Fundulus_heteroclitus
ENSSMAG00000003084	cnot6b	95	94.140	ENSGMOG00000009767	cnot6b	99	94.140	Gadus_morhua
ENSSMAG00000003084	cnot6b	100	85.331	ENSGALG00000034316	CNOT6	100	85.689	Gallus_gallus
ENSSMAG00000003084	cnot6b	100	94.812	ENSGAFG00000008525	cnot6b	100	94.812	Gambusia_affinis
ENSSMAG00000003084	cnot6b	95	93.195	ENSGACG00000018046	cnot6b	99	93.195	Gasterosteus_aculeatus
ENSSMAG00000003084	cnot6b	100	71.020	ENSGAGG00000012176	CNOT6	100	71.377	Gopherus_agassizii
ENSSMAG00000003084	cnot6b	100	84.615	ENSGGOG00000003675	CNOT6	100	84.615	Gorilla_gorilla
ENSSMAG00000003084	cnot6b	100	96.064	ENSHBUG00000002819	cnot6b	100	96.064	Haplochromis_burtoni
ENSSMAG00000003084	cnot6b	100	83.363	ENSHGLG00000017756	CNOT6	100	83.363	Heterocephalus_glaber_female
ENSSMAG00000003084	cnot6b	100	83.363	ENSHGLG00100005747	CNOT6	100	83.363	Heterocephalus_glaber_male
ENSSMAG00000003084	cnot6b	100	94.812	ENSHCOG00000016176	cnot6b	100	94.812	Hippocampus_comes
ENSSMAG00000003084	cnot6b	100	88.909	ENSIPUG00000017482	cnot6b	100	88.909	Ictalurus_punctatus
ENSSMAG00000003084	cnot6b	100	88.909	ENSIPUG00000019831	cnot6a	100	88.909	Ictalurus_punctatus
ENSSMAG00000003084	cnot6b	100	84.436	ENSSTOG00000002803	CNOT6	100	84.436	Ictidomys_tridecemlineatus
ENSSMAG00000003084	cnot6b	100	84.258	ENSJJAG00000012296	Cnot6	100	84.258	Jaculus_jaculus
ENSSMAG00000003084	cnot6b	100	94.275	ENSKMAG00000004640	cnot6b	100	94.275	Kryptolebias_marmoratus
ENSSMAG00000003084	cnot6b	100	96.064	ENSLBEG00000027917	cnot6b	100	96.064	Labrus_bergylta
ENSSMAG00000003084	cnot6b	100	92.308	ENSLOCG00000010102	cnot6b	99	92.308	Lepisosteus_oculatus
ENSSMAG00000003084	cnot6b	100	85.510	ENSLAFG00000016742	CNOT6	100	85.510	Loxodonta_africana
ENSSMAG00000003084	cnot6b	100	84.615	ENSMFAG00000030867	CNOT6	100	84.615	Macaca_fascicularis
ENSSMAG00000003084	cnot6b	100	84.615	ENSMMUG00000018690	CNOT6	100	84.615	Macaca_mulatta
ENSSMAG00000003084	cnot6b	100	84.615	ENSMNEG00000038565	CNOT6	100	84.615	Macaca_nemestrina
ENSSMAG00000003084	cnot6b	100	84.615	ENSMLEG00000010555	CNOT6	100	84.615	Mandrillus_leucophaeus
ENSSMAG00000003084	cnot6b	100	97.138	ENSMAMG00000007515	cnot6b	100	97.138	Mastacembelus_armatus
ENSSMAG00000003084	cnot6b	100	95.886	ENSMZEG00005012899	cnot6b	100	95.886	Maylandia_zebra
ENSSMAG00000003084	cnot6b	100	83.900	ENSMAUG00000019798	Cnot6	100	83.900	Mesocricetus_auratus
ENSSMAG00000003084	cnot6b	98	76.740	ENSMICG00000028378	-	99	76.740	Microcebus_murinus
ENSSMAG00000003084	cnot6b	100	83.184	ENSMICG00000013018	-	100	83.184	Microcebus_murinus
ENSSMAG00000003084	cnot6b	100	83.900	ENSMOCG00000021662	Cnot6	100	83.900	Microtus_ochrogaster
ENSSMAG00000003084	cnot6b	100	93.560	ENSMMOG00000003227	cnot6b	100	93.560	Mola_mola
ENSSMAG00000003084	cnot6b	100	84.973	ENSMODG00000003979	CNOT6	100	85.331	Monodelphis_domestica
ENSSMAG00000003084	cnot6b	100	96.959	ENSMALG00000014251	cnot6b	100	96.959	Monopterus_albus
ENSSMAG00000003084	cnot6b	100	84.079	MGP_CAROLIEiJ_G0016277	Cnot6	100	84.079	Mus_caroli
ENSSMAG00000003084	cnot6b	100	84.079	ENSMUSG00000020362	Cnot6	100	84.079	Mus_musculus
ENSSMAG00000003084	cnot6b	100	84.079	MGP_PahariEiJ_G0017413	Cnot6	100	84.079	Mus_pahari
ENSSMAG00000003084	cnot6b	100	84.079	MGP_SPRETEiJ_G0017122	Cnot6	100	84.079	Mus_spretus
ENSSMAG00000003084	cnot6b	100	85.331	ENSMPUG00000000587	CNOT6	96	85.331	Mustela_putorius_furo
ENSSMAG00000003084	cnot6b	100	83.865	ENSMLUG00000010257	CNOT6	100	83.865	Myotis_lucifugus
ENSSMAG00000003084	cnot6b	100	83.363	ENSNGAG00000008269	Cnot6	100	83.542	Nannospalax_galili
ENSSMAG00000003084	cnot6b	100	96.064	ENSNBRG00000010798	cnot6b	100	96.064	Neolamprologus_brichardi
ENSSMAG00000003084	cnot6b	100	83.721	ENSNLEG00000002322	CNOT6	100	83.721	Nomascus_leucogenys
ENSSMAG00000003084	cnot6b	83	82.407	ENSMEUG00000000025	CNOT6	81	83.333	Notamacropus_eugenii
ENSSMAG00000003084	cnot6b	88	84.762	ENSOPRG00000008244	-	88	84.762	Ochotona_princeps
ENSSMAG00000003084	cnot6b	100	82.826	ENSODEG00000007041	CNOT6	100	82.826	Octodon_degus
ENSSMAG00000003084	cnot6b	75	95.272	ENSONIG00000013027	cnot6b	99	95.272	Oreochromis_niloticus
ENSSMAG00000003084	cnot6b	100	84.973	ENSOANG00000010226	CNOT6	100	84.973	Ornithorhynchus_anatinus
ENSSMAG00000003084	cnot6b	100	83.601	ENSOCUG00000011083	CNOT6	100	83.601	Oryctolagus_cuniculus
ENSSMAG00000003084	cnot6b	100	95.707	ENSORLG00000005059	cnot6b	100	95.707	Oryzias_latipes
ENSSMAG00000003084	cnot6b	100	95.707	ENSORLG00020012784	cnot6b	100	95.707	Oryzias_latipes_hni
ENSSMAG00000003084	cnot6b	94	95.411	ENSORLG00015022658	cnot6b	98	95.411	Oryzias_latipes_hsok
ENSSMAG00000003084	cnot6b	100	96.243	ENSOMEG00000005295	cnot6b	100	96.243	Oryzias_melastigma
ENSSMAG00000003084	cnot6b	94	83.840	ENSOGAG00000032470	CNOT6	100	83.840	Otolemur_garnettii
ENSSMAG00000003084	cnot6b	97	84.007	ENSOARG00000001003	CNOT6	100	84.007	Ovis_aries
ENSSMAG00000003084	cnot6b	100	84.615	ENSPPAG00000032253	CNOT6	100	84.615	Pan_paniscus
ENSSMAG00000003084	cnot6b	100	84.973	ENSPPRG00000011912	CNOT6	100	84.973	Panthera_pardus
ENSSMAG00000003084	cnot6b	100	84.973	ENSPTIG00000016794	CNOT6	100	84.973	Panthera_tigris_altaica
ENSSMAG00000003084	cnot6b	100	84.615	ENSPTRG00000017636	CNOT6	100	84.615	Pan_troglodytes
ENSSMAG00000003084	cnot6b	100	84.615	ENSPANG00000016191	CNOT6	100	84.615	Papio_anubis
ENSSMAG00000003084	cnot6b	100	89.445	ENSPKIG00000021368	cnot6b	100	89.445	Paramormyrops_kingsleyae
ENSSMAG00000003084	cnot6b	98	85.348	ENSPSIG00000017307	CNOT6	100	85.714	Pelodiscus_sinensis
ENSSMAG00000003084	cnot6b	100	94.991	ENSPMGG00000011238	cnot6b	100	94.991	Periophthalmus_magnuspinnatus
ENSSMAG00000003084	cnot6b	100	83.363	ENSPEMG00000000627	Cnot6	100	83.542	Peromyscus_maniculatus_bairdii
ENSSMAG00000003084	cnot6b	100	84.973	ENSPCIG00000020319	CNOT6	99	85.331	Phascolarctos_cinereus
ENSSMAG00000003084	cnot6b	100	94.812	ENSPFOG00000006291	cnot6b	100	94.812	Poecilia_formosa
ENSSMAG00000003084	cnot6b	100	91.234	ENSPLAG00000008266	cnot6b	100	91.234	Poecilia_latipinna
ENSSMAG00000003084	cnot6b	100	94.991	ENSPMEG00000009091	cnot6b	100	94.991	Poecilia_mexicana
ENSSMAG00000003084	cnot6b	100	93.202	ENSPREG00000003713	cnot6b	100	93.202	Poecilia_reticulata
ENSSMAG00000003084	cnot6b	100	84.615	ENSPPYG00000016137	CNOT6	100	84.615	Pongo_abelii
ENSSMAG00000003084	cnot6b	71	81.716	ENSPCAG00000005599	-	71	81.716	Procavia_capensis
ENSSMAG00000003084	cnot6b	100	78.891	ENSPCOG00000017359	CNOT6	100	79.606	Propithecus_coquereli
ENSSMAG00000003084	cnot6b	100	81.574	ENSPVAG00000003069	CNOT6	100	81.574	Pteropus_vampyrus
ENSSMAG00000003084	cnot6b	100	96.064	ENSPNYG00000000321	cnot6b	100	96.064	Pundamilia_nyererei
ENSSMAG00000003084	cnot6b	100	89.982	ENSPNAG00000029586	cnot6a	100	89.982	Pygocentrus_nattereri
ENSSMAG00000003084	cnot6b	100	89.624	ENSPNAG00000028816	cnot6b	100	89.624	Pygocentrus_nattereri
ENSSMAG00000003084	cnot6b	100	83.542	ENSRNOG00000054891	Cnot6	100	83.542	Rattus_norvegicus
ENSSMAG00000003084	cnot6b	100	84.436	ENSRBIG00000004309	CNOT6	100	84.436	Rhinopithecus_bieti
ENSSMAG00000003084	cnot6b	100	84.436	ENSRROG00000035378	CNOT6	100	84.436	Rhinopithecus_roxellana
ENSSMAG00000003084	cnot6b	100	84.794	ENSSBOG00000030494	CNOT6	100	84.794	Saimiri_boliviensis_boliviensis
ENSSMAG00000003084	cnot6b	100	84.973	ENSSHAG00000017436	CNOT6	100	85.331	Sarcophilus_harrisii
ENSSMAG00000003084	cnot6b	100	91.592	ENSSFOG00015015133	CNOT6	100	91.950	Scleropages_formosus
ENSSMAG00000003084	cnot6b	100	89.624	ENSSFOG00015022383	cnot6a	96	89.624	Scleropages_formosus
ENSSMAG00000003084	cnot6b	100	97.496	ENSSDUG00000004151	cnot6b	100	97.496	Seriola_dumerili
ENSSMAG00000003084	cnot6b	100	97.496	ENSSLDG00000004448	cnot6b	100	97.496	Seriola_lalandi_dorsalis
ENSSMAG00000003084	cnot6b	64	66.852	ENSSARG00000012650	-	100	66.852	Sorex_araneus
ENSSMAG00000003084	cnot6b	100	85.331	ENSSPUG00000007893	CNOT6	100	85.689	Sphenodon_punctatus
ENSSMAG00000003084	cnot6b	100	97.317	ENSSPAG00000000149	cnot6b	100	97.317	Stegastes_partitus
ENSSMAG00000003084	cnot6b	100	84.973	ENSSSCG00000014009	CNOT6	100	84.973	Sus_scrofa
ENSSMAG00000003084	cnot6b	100	85.152	ENSTGUG00000001119	CNOT6	100	85.510	Taeniopygia_guttata
ENSSMAG00000003084	cnot6b	100	92.129	ENSTRUG00000002818	cnot6b	100	92.129	Takifugu_rubripes
ENSSMAG00000003084	cnot6b	100	92.844	ENSTNIG00000004443	cnot6b	99	92.844	Tetraodon_nigroviridis
ENSSMAG00000003084	cnot6b	76	77.612	ENSTBEG00000017094	-	87	77.612	Tupaia_belangeri
ENSSMAG00000003084	cnot6b	100	84.973	ENSTTRG00000009363	CNOT6	100	84.973	Tursiops_truncatus
ENSSMAG00000003084	cnot6b	90	74.405	ENSUAMG00000004579	CNOT6	99	74.405	Ursus_americanus
ENSSMAG00000003084	cnot6b	100	81.058	ENSUMAG00000024577	CNOT6	100	81.058	Ursus_maritimus
ENSSMAG00000003084	cnot6b	84	89.189	ENSVPAG00000003593	CNOT6	83	89.189	Vicugna_pacos
ENSSMAG00000003084	cnot6b	100	84.973	ENSVVUG00000026940	CNOT6	100	84.973	Vulpes_vulpes
ENSSMAG00000003084	cnot6b	100	91.592	ENSXCOG00000003360	cnot6b	100	91.592	Xiphophorus_couchianus
ENSSMAG00000003084	cnot6b	100	94.991	ENSXMAG00000008730	cnot6b	100	94.991	Xiphophorus_maculatus